GCA_013331795.1 (Q82260): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 74.6606334841629 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (133 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier | |||||||
POCPu: 2.4328249818445897
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| Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier | |||||||
G+C Difference (%): 4.350000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium movens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium movens / qualifier | |||||||
16S Identity %: 74.65083798882681
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus piezophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus piezophilus / qualifier | |||||||
16S Identity %: 74.64212678936605
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| Property / Comparison to close relatives: Thermococcus piezophilus / qualifier | |||||||
POCPu: 2.7608253414705026
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| Property / Comparison to close relatives: Thermococcus piezophilus / qualifier | |||||||
G+C Difference (%): 16.86
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosphaera cuniculi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
16S Identity %: 74.60750853242321
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| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
POCPu: 2.10373594486761
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| Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier | |||||||
G+C Difference (%): 6.170000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Palaeococcus helgesonii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Palaeococcus helgesonii / qualifier | |||||||
16S Identity %: 74.57983193277312
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium beijingense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium beijingense / qualifier | |||||||
16S Identity %: 74.55579246624022
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus waiotapuensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus waiotapuensis / qualifier | |||||||
16S Identity %: 74.54417952314165
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus litoralis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus litoralis / qualifier | |||||||
16S Identity %: 74.52316076294278
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| Property / Comparison to close relatives: Thermococcus litoralis / qualifier | |||||||
POCPu: 2.8890705914418096
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| Property / Comparison to close relatives: Thermococcus litoralis / qualifier | |||||||
G+C Difference (%): 8.840000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobrevibacter curvatus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier | |||||||
16S Identity %: 74.31532198371576
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| Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier | |||||||
POCPu: 2.2264631043257
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| Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier | |||||||
G+C Difference (%): 8.530000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium aggregans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium aggregans / qualifier | |||||||
16S Identity %: 74.14040114613181
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| Property / Comparison to close relatives: Methanobacterium aggregans / qualifier | |||||||
POCPu: 2.4354460093896715
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| Property / Comparison to close relatives: Methanobacterium aggregans / qualifier | |||||||
G+C Difference (%): 3.8900000000000006
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium formicicum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium formicicum / qualifier | |||||||
16S Identity %: 74.12280701754386
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| Property / Comparison to close relatives: Methanobacterium formicicum / qualifier | |||||||
POCPu: 1.9971870604781998
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| Property / Comparison to close relatives: Methanobacterium formicicum / qualifier | |||||||
G+C Difference (%): 7.119999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
16S Identity %: 74.09432672590567
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| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
POCPu: 2.2026431718061676
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| Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier | |||||||
G+C Difference (%): 6.620000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium kanagiense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium kanagiense / qualifier | |||||||
16S Identity %: 74.05368203716449
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium ferruginis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier | |||||||
16S Identity %: 74
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| Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier | |||||||
POCPu: 1.9497928345113331
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| Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier | |||||||
G+C Difference (%): 3.1400000000000006
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanobacterium petrolearium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier | |||||||
16S Identity %: 73.91618497109826
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| Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier | |||||||
POCPu: 1.844494892167991
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| Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier | |||||||
G+C Difference (%): 3.520000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus voltae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus voltae / qualifier | |||||||
16S Identity %: 73.74914324880055
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| Property / Comparison to close relatives: Methanococcus voltae / qualifier | |||||||
POCPu: 1.9044196909809556
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| Property / Comparison to close relatives: Methanococcus voltae / qualifier | |||||||
G+C Difference (%): 5.260000000000002
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| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 6
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 13
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| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT9 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: PL12 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: PL12 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM32 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM32 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0.2
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 02:31, 9 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_013331795.1 |
genome assembly |
Statements
no current description - please contribute here
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