GCA_001029795.1 (Q44865): Difference between revisions
Appearance
Added qualifier: POCPu (P4): 0.7458269208002841 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (172 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Kitasatospora saccharophila / qualifier | |||||||
G+C Difference (%): 22.11
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Mesorhizobium composti / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Mesorhizobium composti / qualifier | |||||||
16S Identity %: 73.28023171614771
| |||||||
| Property / Comparison to close relatives: Mesorhizobium composti / qualifier | |||||||
POCPu: 1.1206724034420652
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| Property / Comparison to close relatives: Mesorhizobium composti / qualifier | |||||||
G+C Difference (%): 13.350000000000009
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Kitasatospora xanthocidica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Kitasatospora xanthocidica / qualifier | |||||||
16S Identity %: 73.27586206896551
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| Property / Comparison to close relatives: Kitasatospora xanthocidica / qualifier | |||||||
POCPu: 0.8223303219828585
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| Property / Comparison to close relatives: Kitasatospora xanthocidica / qualifier | |||||||
G+C Difference (%): 21.629999999999995
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methyloceanibacter methanicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methyloceanibacter methanicus / qualifier | |||||||
16S Identity %: 73.18789584799437
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| Property / Comparison to close relatives: Methyloceanibacter methanicus / qualifier | |||||||
POCPu: 1.4740721242432218
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| Property / Comparison to close relatives: Methyloceanibacter methanicus / qualifier | |||||||
G+C Difference (%): 12.149999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Rhodoligotrophos defluvii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Rhodoligotrophos defluvii / qualifier | |||||||
16S Identity %: 73.1142643764003
| |||||||
| Property / Comparison to close relatives: Rhodoligotrophos defluvii / qualifier | |||||||
POCPu: 1.0484011881880133
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| Property / Comparison to close relatives: Rhodoligotrophos defluvii / qualifier | |||||||
G+C Difference (%): 12.579999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Phenylobacterium composti / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Phenylobacterium composti / qualifier | |||||||
16S Identity %: 73.08259587020649
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Kitasatospora viridis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Kitasatospora viridis / qualifier | |||||||
16S Identity %: 73.07415406767458
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| Property / Comparison to close relatives: Kitasatospora viridis / qualifier | |||||||
POCPu: 0.7446016381236039
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| Property / Comparison to close relatives: Kitasatospora viridis / qualifier | |||||||
G+C Difference (%): 21.260000000000005
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Iodidimonas nitroreducens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Iodidimonas nitroreducens / qualifier | |||||||
16S Identity %: 72.9957805907173
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| Property / Comparison to close relatives: Iodidimonas nitroreducens / qualifier | |||||||
POCPu: 1.8429689472355466
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| Property / Comparison to close relatives: Iodidimonas nitroreducens / qualifier | |||||||
G+C Difference (%): 4.300000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methyloligella halotolerans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methyloligella halotolerans / qualifier | |||||||
16S Identity %: 72.99426934097421
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| Property / Comparison to close relatives: Methyloligella halotolerans / qualifier | |||||||
POCPu: 1.7534537725823591
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| Property / Comparison to close relatives: Methyloligella halotolerans / qualifier | |||||||
G+C Difference (%): 11.730000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Phenylobacterium terrae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Phenylobacterium terrae / qualifier | |||||||
16S Identity %: 72.9403409090909
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Caminibacter mediatlanticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Caminibacter mediatlanticus / qualifier | |||||||
16S Identity %: 72.92393579902303
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| Property / Comparison to close relatives: Caminibacter mediatlanticus / qualifier | |||||||
POCPu: 2.051282051282051
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| Property / Comparison to close relatives: Caminibacter mediatlanticus / qualifier | |||||||
G+C Difference (%): 24.979999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Desulfuromusa bakii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Desulfuromusa bakii / qualifier | |||||||
16S Identity %: 72.84122562674095
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methyloligella solikamskensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methyloligella solikamskensis / qualifier | |||||||
16S Identity %: 72.77936962750717
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Geothermomicrobium terrae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Geothermomicrobium terrae / qualifier | |||||||
16S Identity %: 72.74001401541696
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Bartonella bovis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Bartonella bovis / qualifier | |||||||
16S Identity %: 72.68847795163585
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| Property / Comparison to close relatives: Bartonella bovis / qualifier | |||||||
POCPu: 2.68762677484787
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| Property / Comparison to close relatives: Bartonella bovis / qualifier | |||||||
G+C Difference (%): 14.509999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Parasporobacterium paucivorans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Parasporobacterium paucivorans / qualifier | |||||||
16S Identity %: 72.55586592178771
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| Property / Comparison to close relatives: Parasporobacterium paucivorans / qualifier | |||||||
POCPu: 2.7597955706984667
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| Property / Comparison to close relatives: Parasporobacterium paucivorans / qualifier | |||||||
G+C Difference (%): 7.699999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Bartonella rattaustraliani / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Bartonella rattaustraliani / qualifier | |||||||
16S Identity %: 72.51082251082252
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| Property / Comparison to close relatives: Bartonella rattaustraliani / qualifier | |||||||
POCPu: 1.991869918699187
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| Property / Comparison to close relatives: Bartonella rattaustraliani / qualifier | |||||||
G+C Difference (%): 13.030000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Polymorphobacter megasporae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Polymorphobacter megasporae / qualifier | |||||||
16S Identity %: 72.30878186968839
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| Property / Comparison to close relatives: Polymorphobacter megasporae / qualifier | |||||||
POCPu: 1.060695344725987
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| Property / Comparison to close relatives: Polymorphobacter megasporae / qualifier | |||||||
G+C Difference (%): 13.629999999999995
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Segnochrobactrum spirostomi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Segnochrobactrum spirostomi / qualifier | |||||||
16S Identity %: 71.97724039829303
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| Property / Comparison to close relatives: Segnochrobactrum spirostomi / qualifier | |||||||
POCPu: 1.042636380562279
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| Property / Comparison to close relatives: Segnochrobactrum spirostomi / qualifier | |||||||
G+C Difference (%): 16.450000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sandaracinobacteroides saxicola / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sandaracinobacteroides saxicola / qualifier | |||||||
16S Identity %: 71.76895306859205
| |||||||
| Property / Comparison to close relatives: Sandaracinobacteroides saxicola / qualifier | |||||||
POCPu: 1.425609123898393
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| Property / Comparison to close relatives: Sandaracinobacteroides saxicola / qualifier | |||||||
G+C Difference (%): 15.820000000000007
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ahrensia kielensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ahrensia kielensis / qualifier | |||||||
16S Identity %: 71.65242165242165
| |||||||
| Property / Comparison to close relatives: Ahrensia kielensis / qualifier | |||||||
POCPu: 0.7882291119285338
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| Property / Comparison to close relatives: Ahrensia kielensis / qualifier | |||||||
G+C Difference (%): 3.799999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Phenylobacterium soli / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Phenylobacterium soli / qualifier | |||||||
16S Identity %: 71.44896502498216
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| Property / Comparison to close relatives: Phenylobacterium soli / qualifier | |||||||
POCPu: 1.3362541073384446
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| Property / Comparison to close relatives: Phenylobacterium soli / qualifier | |||||||
G+C Difference (%): 18.239999999999995
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Kitasatospora atroaurantiaca / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Kitasatospora atroaurantiaca / qualifier | |||||||
16S Identity %: 70.72192513368985
| |||||||
| Property / Comparison to close relatives: Kitasatospora atroaurantiaca / qualifier | |||||||
POCPu: 0.9948946197146223
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| Property / Comparison to close relatives: Kitasatospora atroaurantiaca / qualifier | |||||||
G+C Difference (%): 19.39
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| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GH6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH6 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT28 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT26 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT26 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 8
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM5 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 2
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| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Mannose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Mannose degradation / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 13:24, 21 July 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_001029795.1 |
genome assembly |
Statements
no current description - please contribute here
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