GCA_001025035.1 (Q44815): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 85.9520639147803 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives: Micromonospora sonchi / qualifier | |||||||
POCPu: 7.059471365638767
| |||||||
| Property / Comparison to close relatives: Micromonospora sonchi / qualifier | |||||||
G+C Difference (%): 13.690000000000005
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Asanoa ferruginea / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Asanoa ferruginea / qualifier | |||||||
16S Identity %: 85.9520639147803
| |||||||
| Property / Comparison to close relatives: Asanoa ferruginea / qualifier | |||||||
POCPu: 6.518687489033163
| |||||||
| Property / Comparison to close relatives: Asanoa ferruginea / qualifier | |||||||
G+C Difference (%): 13.589999999999996
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Modestobacter lacusdianchii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Modestobacter lacusdianchii / qualifier | |||||||
16S Identity %: 85.92297476759629
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nakamurella multipartita / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nakamurella multipartita / qualifier | |||||||
16S Identity %: 85.90514362057449
| |||||||
| Property / Comparison to close relatives: Nakamurella multipartita / qualifier | |||||||
POCPu: 7.630331753554502
| |||||||
| Property / Comparison to close relatives: Nakamurella multipartita / qualifier | |||||||
G+C Difference (%): 13.660000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Asanoa ishikariensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Asanoa ishikariensis / qualifier | |||||||
16S Identity %: 85.88548601864181
| |||||||
| Property / Comparison to close relatives: Asanoa ishikariensis / qualifier | |||||||
POCPu: 6.378311984558695
| |||||||
| Property / Comparison to close relatives: Asanoa ishikariensis / qualifier | |||||||
G+C Difference (%): 13.520000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Kribbella flavida / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Kribbella flavida / qualifier | |||||||
16S Identity %: 85.82834331337325
| |||||||
| Property / Comparison to close relatives: Kribbella flavida / qualifier | |||||||
POCPu: 6.764295676429567
| |||||||
| Property / Comparison to close relatives: Kribbella flavida / qualifier | |||||||
G+C Difference (%): 13.309999999999995
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Micromonospora endophytica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Micromonospora endophytica / qualifier | |||||||
16S Identity %: 85.81890812250333
| |||||||
| Property / Comparison to close relatives: Micromonospora endophytica / qualifier | |||||||
POCPu: 7.399955287279231
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| Property / Comparison to close relatives: Micromonospora endophytica / qualifier | |||||||
G+C Difference (%): 13.600000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Actinomadura graeca / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Actinomadura graeca / qualifier | |||||||
16S Identity %: 85.79017264276229
| |||||||
| Property / Comparison to close relatives: Actinomadura graeca / qualifier | |||||||
POCPu: 6.861839674916882
| |||||||
| Property / Comparison to close relatives: Actinomadura graeca / qualifier | |||||||
G+C Difference (%): 15.110000000000007
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Plantactinospora solaniradicis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Plantactinospora solaniradicis / qualifier | |||||||
16S Identity %: 85.75233022636485
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Actinoplanes friuliensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Actinoplanes friuliensis / qualifier | |||||||
16S Identity %: 85.7238158772515
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nucisporomicrobium flavum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nucisporomicrobium flavum / qualifier | |||||||
16S Identity %: 85.6858846918489
| |||||||
| Property / Comparison to close relatives: Nucisporomicrobium flavum / qualifier | |||||||
POCPu: 5.97108175651553
| |||||||
| Property / Comparison to close relatives: Nucisporomicrobium flavum / qualifier | |||||||
G+C Difference (%): 14.690000000000005
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Micromonospora phaseoli / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Micromonospora phaseoli / qualifier | |||||||
16S Identity %: 85.64784053156146
| |||||||
| Property / Comparison to close relatives: Micromonospora phaseoli / qualifier | |||||||
POCPu: 8.06360663132965
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| Property / Comparison to close relatives: Micromonospora phaseoli / qualifier | |||||||
G+C Difference (%): 14.050000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Micromonospora polyrhachis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Micromonospora polyrhachis / qualifier | |||||||
16S Identity %: 85.56220891550232
| |||||||
| Property / Comparison to close relatives: Micromonospora polyrhachis / qualifier | |||||||
POCPu: 7.034958998705222
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| Property / Comparison to close relatives: Micromonospora polyrhachis / qualifier | |||||||
G+C Difference (%): 11.970000000000006
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Jidongwangia harbinensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Jidongwangia harbinensis / qualifier | |||||||
16S Identity %: 85.51495016611295
| |||||||
| Property / Comparison to close relatives: Jidongwangia harbinensis / qualifier | |||||||
POCPu: 6.0584958217270195
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| Property / Comparison to close relatives: Jidongwangia harbinensis / qualifier | |||||||
G+C Difference (%): 14.839999999999996
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Petropleomorpha daqingensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Petropleomorpha daqingensis / qualifier | |||||||
POCPu: 8.850420577837378
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| Property / Comparison to close relatives: Petropleomorpha daqingensis / qualifier | |||||||
G+C Difference (%): 16.380000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pseudofrankia asymbiotica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pseudofrankia asymbiotica / qualifier | |||||||
POCPu: 8.581043185642176
| |||||||
| Property / Comparison to close relatives: Pseudofrankia asymbiotica / qualifier | |||||||
G+C Difference (%): 14.68
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Cellulosimicrobium composti / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Cellulosimicrobium composti / qualifier | |||||||
POCPu: 8.179536394507604
| |||||||
| Property / Comparison to close relatives: Cellulosimicrobium composti / qualifier | |||||||
G+C Difference (%): 17.300000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Amorphoplanes friuliensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Amorphoplanes friuliensis / qualifier | |||||||
POCPu: 5.890422704278488
| |||||||
| Property / Comparison to close relatives: Amorphoplanes friuliensis / qualifier | |||||||
G+C Difference (%): 13.100000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Parafrankia irregularis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Parafrankia irregularis / qualifier | |||||||
POCPu: 8.388356737654608
| |||||||
| Property / Comparison to close relatives: Parafrankia irregularis / qualifier | |||||||
G+C Difference (%): 13.630000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Protofrankia coriariae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Protofrankia coriariae / qualifier | |||||||
POCPu: 8.303994172635669
| |||||||
| Property / Comparison to close relatives: Protofrankia coriariae / qualifier | |||||||
G+C Difference (%): 12.899999999999999
| |||||||
| Property / Carbon source | |||||||
| Property / Carbon source: starch / rank | |||||||
Normal rank | |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 9
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH2 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH64 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH64 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH16 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH16 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH38 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH38 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH6 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH3 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH43 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH43 / qualifier | |||||||
Occurance: 7
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 6
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH18 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH18 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH77 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH77 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH20 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH20 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH36 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH36 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH5 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH101 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH101 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH1 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH29 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH29 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH32 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH32 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH4 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH71 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH71 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH33 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH33 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH63 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH63 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH135 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH135 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH19 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 41
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 44
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT35 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT35 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT89 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT89 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 9
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT26 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT26 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT28 / qualifier | |||||||
Occurance: 5
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT32 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT32 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT20 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT20 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT94 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT94 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT81 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT81 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE6 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE9 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE1 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE12 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE12 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE0 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM5 / qualifier | |||||||
Occurance: 6
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM12 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM12 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM56 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM56 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM6 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 6
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM41 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM41 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM51 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM2 / qualifier | |||||||
Occurance: 5
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM48 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM48 / qualifier | |||||||
Occurance: 5
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM38 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM38 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM32 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM32 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM42 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM42 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Proline biosynthesis, glutamate => proline / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Proline biosynthesis, glutamate => proline / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Serine biosynthesis, glycerate-3P => serine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Serine biosynthesis, glycerate-3P => serine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: beta-Oxidation, acyl-CoA synthesis / rank | |||||||
Normal rank | |||||||
| Property / Pathway: beta-Oxidation, acyl-CoA synthesis / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Triacylglycerol biosynthesis / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Triacylglycerol biosynthesis / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank | |||||||
Normal rank | |||||||
| Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Heme biosynthesis, plants and bacteria, glutamate => heme / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: F-type ATPase, prokaryotes and chloroplasts / rank | |||||||
Normal rank | |||||||
| Property / Pathway: F-type ATPase, prokaryotes and chloroplasts / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: C10-C20 isoprenoid biosynthesis, bacteria / rank | |||||||
Normal rank | |||||||
| Property / Pathway: C10-C20 isoprenoid biosynthesis, bacteria / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: C10-C20 isoprenoid biosynthesis, archaea / rank | |||||||
Normal rank | |||||||
| Property / Pathway: C10-C20 isoprenoid biosynthesis, archaea / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycine cleavage system / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycine cleavage system / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway (Pentose phosphate cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway (Pentose phosphate cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Tryptophan biosynthesis, chorismate => tryptophan / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Tryptophan biosynthesis, chorismate => tryptophan / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Melibiose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Melibiose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Mannose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Mannose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Aspartate degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Aspartate degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glutamate degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glutamate degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Alanine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Alanine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Methionine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Methionine degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glutamine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glutamine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycerol degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycerol degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycolysis (pay-off phase) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycolysis (pay-off phase) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: NADH:ferredoxin oxidoreductase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: NADH:ferredoxin oxidoreductase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway (oxidative phase) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway (oxidative phase) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetate to acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetate to acetyl-CoA / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 1.7
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0.08
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 22.2
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0.03
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 1.8
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0.07
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0.3
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0.04
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 1.5
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0.01
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 9.4
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0.01
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 15.7
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0.01
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 33.2
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0.05
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 25.1
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0.02
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 39.2
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0.01
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 2.4
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0.02
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0.5
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 1.2
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0.02
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 12:34, 21 July 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_001025035.1 |
genome assembly |
Statements
no current description - please contribute here
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8.850420577837378
16.380000000000003
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8.179536394507604
17.300000000000004
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5.890422704278488
13.100000000000001
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