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GCA_013178285.1 (Q81143): Difference between revisions

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Added qualifier: POCPu (P4): 8.127572016460906
 
(279 intermediate revisions by the same user not shown)
Property / Comparison to close relatives: Thermococcus celericrescens / qualifier
 
G+C Difference (%): 19.759999999999998
Amount19.759999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter tenebrarum / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier
 
16S Identity %: 26.160337552742618
Amount26.160337552742618
Unit1
Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier
 
POCPu: 10.285132382892057
Amount10.285132382892057
Unit1
Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier
 
G+C Difference (%): 7.519999999999996
Amount7.519999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium congolense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium congolense / qualifier
 
16S Identity %: 26.07215793056501
Amount26.07215793056501
Unit1
Property / Comparison to close relatives: Methanobacterium congolense / qualifier
 
POCPu: 9.180821328746507
Amount9.180821328746507
Unit1
Property / Comparison to close relatives: Methanobacterium congolense / qualifier
 
G+C Difference (%): 3.960000000000001
Amount3.960000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium aggregans / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium aggregans / qualifier
 
16S Identity %: 25.59774964838256
Amount25.59774964838256
Unit1
Property / Comparison to close relatives: Methanobacterium aggregans / qualifier
 
POCPu: 9.313077939233818
Amount9.313077939233818
Unit1
Property / Comparison to close relatives: Methanobacterium aggregans / qualifier
 
G+C Difference (%): 3.6099999999999994
Amount3.6099999999999994
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium movens / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium movens / qualifier
 
16S Identity %: 25.49828178694158
Amount25.49828178694158
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus eurythermalis / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus eurythermalis / qualifier
 
16S Identity %: 25.45949625595643
Amount25.45949625595643
Unit1
Property / Comparison to close relatives: Thermococcus eurythermalis / qualifier
 
POCPu: 8.571428571428571
Amount8.571428571428571
Unit1
Property / Comparison to close relatives: Thermococcus eurythermalis / qualifier
 
G+C Difference (%): 18.92
Amount18.92
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter defluvii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter defluvii / qualifier
 
16S Identity %: 25.381414701803052
Amount25.381414701803052
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter wolfei / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter wolfei / qualifier
 
16S Identity %: 25.36082474226804
Amount25.36082474226804
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus waiotapuensis / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus waiotapuensis / qualifier
 
16S Identity %: 25.34722222222222
Amount25.34722222222222
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium alcaliphilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
16S Identity %: 25.333333333333336
Amount25.333333333333336
Unit1
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
POCPu: 9.611629420698634
Amount9.611629420698634
Unit1
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
G+C Difference (%): 1.1300000000000026
Amount1.1300000000000026
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus profundus / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus profundus / qualifier
 
16S Identity %: 25.225225225225223
Amount25.225225225225223
Unit1
Property / Comparison to close relatives: Thermococcus profundus / qualifier
 
POCPu: 8.875338753387533
Amount8.875338753387533
Unit1
Property / Comparison to close relatives: Thermococcus profundus / qualifier
 
G+C Difference (%): 18.560000000000002
Amount18.560000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium flexile / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium flexile / qualifier
 
16S Identity %: 25.034387895460796
Amount25.034387895460796
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium beijingense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium beijingense / qualifier
 
16S Identity %: 24.91325468424705
Amount24.91325468424705
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus litoralis / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus litoralis / qualifier
 
16S Identity %: 24.897959183673468
Amount24.897959183673468
Unit1
Property / Comparison to close relatives: Thermococcus litoralis / qualifier
 
POCPu: 9.660628773683115
Amount9.660628773683115
Unit1
Property / Comparison to close relatives: Thermococcus litoralis / qualifier
 
G+C Difference (%): 8.560000000000002
Amount8.560000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
16S Identity %: 24.813052345343305
Amount24.813052345343305
Unit1
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
POCPu: 9.540889526542324
Amount9.540889526542324
Unit1
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
G+C Difference (%): 15.009999999999998
Amount15.009999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermus sociabilis / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermus sociabilis / qualifier
 
16S Identity %: 24.795640326975477
Amount24.795640326975477
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus zilligii / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus zilligii / qualifier
 
16S Identity %: 24.742974640164498
Amount24.742974640164498
Unit1
Property / Comparison to close relatives: Thermococcus zilligii / qualifier
 
POCPu: 9.206425317669623
Amount9.206425317669623
Unit1
Property / Comparison to close relatives: Thermococcus zilligii / qualifier
 
G+C Difference (%): 19.949999999999996
Amount19.949999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus gammatolerans / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus gammatolerans / qualifier
 
16S Identity %: 24.693877551020407
Amount24.693877551020407
Unit1
Property / Comparison to close relatives: Thermococcus gammatolerans / qualifier
 
POCPu: 9.263392857142858
Amount9.263392857142858
Unit1
Property / Comparison to close relatives: Thermococcus gammatolerans / qualifier
 
G+C Difference (%): 19.03
Amount19.03
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium oryzae / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium oryzae / qualifier
 
16S Identity %: 24.653739612188367
Amount24.653739612188367
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter crinale / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter crinale / qualifier
 
16S Identity %: 24.51388888888889
Amount24.51388888888889
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus thermotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus thermotolerans / qualifier
 
16S Identity %: 24.47171097477846
Amount24.47171097477846
Unit1
Property / Comparison to close relatives: Thermococcus thermotolerans / qualifier
 
POCPu: 8.854961832061068
Amount8.854961832061068
Unit1
Property / Comparison to close relatives: Thermococcus thermotolerans / qualifier
 
G+C Difference (%): 18.96
Amount18.96
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus henrietii / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus henrietii / qualifier
 
16S Identity %: 24.285714285714285
Amount24.285714285714285
Unit1
Property / Comparison to close relatives: Thermococcus henrietii / qualifier
 
POCPu: 8.836206896551724
Amount8.836206896551724
Unit1
Property / Comparison to close relatives: Thermococcus henrietii / qualifier
 
G+C Difference (%): 20.049999999999997
Amount20.049999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Palaeococcus pacificus / rank
 
Normal rank
Property / Comparison to close relatives: Palaeococcus pacificus / qualifier
 
16S Identity %: 24.06380027739251
Amount24.06380027739251
Unit1
Property / Comparison to close relatives: Palaeococcus pacificus / qualifier
 
POCPu: 10.42830540037244
Amount10.42830540037244
Unit1
Property / Comparison to close relatives: Palaeococcus pacificus / qualifier
 
G+C Difference (%): 8.509999999999998
Amount8.509999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter marburgensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier
 
16S Identity %: 23.99728076138681
Amount23.99728076138681
Unit1
Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier
 
POCPu: 9.743463246176615
Amount9.743463246176615
Unit1
Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier
 
G+C Difference (%): 14.11
Amount14.11
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus cleftensis / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus cleftensis / qualifier
 
16S Identity %: 23.945578231292515
Amount23.945578231292515
Unit1
Property / Comparison to close relatives: Thermococcus cleftensis / qualifier
 
POCPu: 9.337899543378995
Amount9.337899543378995
Unit1
Property / Comparison to close relatives: Thermococcus cleftensis / qualifier
 
G+C Difference (%): 21.29
Amount21.29
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium kanagiense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium kanagiense / qualifier
 
16S Identity %: 23.920493488690884
Amount23.920493488690884
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus aegaeus / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus aegaeus / qualifier
 
16S Identity %: 23.59472588480222
Amount23.59472588480222
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus piezophilus / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus piezophilus / qualifier
 
16S Identity %: 23.537414965986393
Amount23.537414965986393
Unit1
Property / Comparison to close relatives: Thermococcus piezophilus / qualifier
 
POCPu: 9.092896174863387
Amount9.092896174863387
Unit1
Property / Comparison to close relatives: Thermococcus piezophilus / qualifier
 
G+C Difference (%): 16.58
Amount16.58
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus kodakarensis / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus kodakarensis / qualifier
 
16S Identity %: 23.537414965986393
Amount23.537414965986393
Unit1
Property / Comparison to close relatives: Thermococcus kodakarensis / qualifier
 
POCPu: 9.027928122970339
Amount9.027928122970339
Unit1
Property / Comparison to close relatives: Thermococcus kodakarensis / qualifier
 
G+C Difference (%): 17.47
Amount17.47
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermus fervidus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermus fervidus / qualifier
 
16S Identity %: 23.537414965986393
Amount23.537414965986393
Unit1
Property / Comparison to close relatives: Methanothermus fervidus / qualifier
 
POCPu: 10.458057395143488
Amount10.458057395143488
Unit1
Property / Comparison to close relatives: Methanothermus fervidus / qualifier
 
G+C Difference (%): 2.8900000000000006
Amount2.8900000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus coalescens / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus coalescens / qualifier
 
16S Identity %: 23.46938775510204
Amount23.46938775510204
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter ruminantium / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier
 
16S Identity %: 23.370319001386964
Amount23.370319001386964
Unit1
Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier
 
POCPu: 6.7924528301886795
Amount6.7924528301886795
Unit1
Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier
 
G+C Difference (%): 1.8900000000000006
Amount1.8900000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter acididurans / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter acididurans / qualifier
 
16S Identity %: 23.16258351893096
Amount23.16258351893096
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter smithii / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier
 
16S Identity %: 23.12925170068027
Amount23.12925170068027
Unit1
Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier
 
POCPu: 7.366617719040626
Amount7.366617719040626
Unit1
Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier
 
G+C Difference (%): 3.5
Amount3.5
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium lacus / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium lacus / qualifier
 
16S Identity %: 23.12267657992565
Amount23.12267657992565
Unit1
Property / Comparison to close relatives: Methanobacterium lacus / qualifier
 
POCPu: 8.782104391052195
Amount8.782104391052195
Unit1
Property / Comparison to close relatives: Methanobacterium lacus / qualifier
 
G+C Difference (%): 1.2999999999999972
Amount1.2999999999999972
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus marisnigri / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
16S Identity %: 23.071672354948806
Amount23.071672354948806
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
POCPu: 6.3923125130561935
Amount6.3923125130561935
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
G+C Difference (%): 27.53
Amount27.53
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermococcus sibiricus / rank
 
Normal rank
Property / Comparison to close relatives: Thermococcus sibiricus / qualifier
 
16S Identity %: 22.721088435374153
Amount22.721088435374153
Unit1
Property / Comparison to close relatives: Thermococcus sibiricus / qualifier
 
POCPu: 10.0531546105847
Amount10.0531546105847
Unit1
Property / Comparison to close relatives: Thermococcus sibiricus / qualifier
 
G+C Difference (%): 5.670000000000002
Amount5.670000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium paludis / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium paludis / qualifier
 
16S Identity %: 22.585034013605444
Amount22.585034013605444
Unit1
Property / Comparison to close relatives: Methanobacterium paludis / qualifier
 
POCPu: 9.459743535841918
Amount9.459743535841918
Unit1
Property / Comparison to close relatives: Methanobacterium paludis / qualifier
 
G+C Difference (%): 1.1999999999999957
Amount1.1999999999999957
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium arcticum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium arcticum / qualifier
 
16S Identity %: 21.88385269121813
Amount21.88385269121813
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter wolfeii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter wolfeii / qualifier
 
POCPu: 9.754335260115607
Amount9.754335260115607
Unit1
Property / Comparison to close relatives: Methanothermobacter wolfeii / qualifier
 
G+C Difference (%): 14.14
Amount14.14
Unit1
Property / CAZyme
 
Property / CAZyme: GH101 / rank
 
Normal rank
Property / CAZyme: GH101 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH23 / rank
 
Normal rank
Property / CAZyme: GH23 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 10
Amount10
Unit1
Property / CAZyme
 
Property / CAZyme: GT7 / rank
 
Normal rank
Property / CAZyme: GT7 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT13 / rank
 
Normal rank
Property / CAZyme: GT13 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT20 / rank
 
Normal rank
Property / CAZyme: GT20 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 25
Amount25
Unit1
Property / CAZyme
 
Property / CAZyme: GT22 / rank
 
Normal rank
Property / CAZyme: GT22 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT0 / rank
 
Normal rank
Property / CAZyme: GT0 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: PL12 / rank
 
Normal rank
Property / CAZyme: PL12 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE15 / rank
 
Normal rank
Property / CAZyme: CE15 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE0 / rank
 
Normal rank
Property / CAZyme: CE0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 7
Amount7
Unit1
Property / CAZyme
 
Property / CAZyme: CBM48 / rank
 
Normal rank
Property / CAZyme: CBM48 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Proline biosynthesis, glutamate => proline / rank
 
Normal rank
Property / Pathway: Proline biosynthesis, glutamate => proline / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine / rank
 
Normal rank
Property / Pathway: Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / rank
 
Normal rank
Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-L-FucNAc biosynthesis, UDP-GlcNAc => UDP-L-FucNAc / rank
 
Normal rank
Property / Pathway: UDP-L-FucNAc biosynthesis, UDP-GlcNAc => UDP-L-FucNAc / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA / rank
 
Normal rank
Property / Pathway: UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / rank
 
Normal rank
Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / qualifier
 
Property / Pathway
 
Property / Pathway: CMP-Leg5Ac7Ac biosynthesis, UDP-BacNAc4NAc => CMP-Leg5Ac7Ac / rank
 
Normal rank
Property / Pathway: CMP-Leg5Ac7Ac biosynthesis, UDP-BacNAc4NAc => CMP-Leg5Ac7Ac / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA / rank
 
Normal rank
Property / Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / rank
 
Normal rank
Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate / rank
 
Normal rank
Property / Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 1.9
Amount1.9
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.11
Amount0.11
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.8
Amount0.8
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.05
Amount0.05
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0.18
Amount0.18
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 11
Amount11
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.31
Amount0.31
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 3.5
Amount3.5
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.73
Amount0.73
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0.9
Amount0.9
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.08
Amount0.08
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 13:29, 8 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_013178285.1
    genome assembly

      Statements

      no current description - please contribute here
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