GCA_012910725.1 (Q79968): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 86.4693446088795 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosarcina baltica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosarcina baltica / qualifier | |||||||
16S Identity %: 86.38783269961976
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanolobus psychrotolerans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier | |||||||
16S Identity %: 86.32478632478633
| |||||||
| Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier | |||||||
POCPu: 18.343472157229762
| |||||||
| Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier | |||||||
G+C Difference (%): 0
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanolobus profundi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanolobus profundi / qualifier | |||||||
16S Identity %: 86.31503920171062
| |||||||
| Property / Comparison to close relatives: Methanolobus profundi / qualifier | |||||||
POCPu: 18.687589158345222
| |||||||
| Property / Comparison to close relatives: Methanolobus profundi / qualifier | |||||||
G+C Difference (%): 1.240000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanohalophilus levihalophilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier | |||||||
16S Identity %: 86.26734842951059
| |||||||
| Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier | |||||||
POCPu: 20.801364023870416
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| Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier | |||||||
G+C Difference (%): 1.1900000000000048
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosarcina lacustris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosarcina lacustris / qualifier | |||||||
16S Identity %: 86.13933236574745
| |||||||
| Property / Comparison to close relatives: Methanosarcina lacustris / qualifier | |||||||
POCPu: 16.726128016789087
| |||||||
| Property / Comparison to close relatives: Methanosarcina lacustris / qualifier | |||||||
G+C Difference (%): 0.490000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosalsum natronophilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier | |||||||
16S Identity %: 85.75380359612724
| |||||||
| Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier | |||||||
POCPu: 21.586037966932025
| |||||||
| Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier | |||||||
G+C Difference (%): 6.989999999999995
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanosarcina thermophila / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanosarcina thermophila / qualifier | |||||||
16S Identity %: 85.46348314606742
| |||||||
| Property / Comparison to close relatives: Methanosarcina thermophila / qualifier | |||||||
POCPu: 19.815323184427253
| |||||||
| Property / Comparison to close relatives: Methanosarcina thermophila / qualifier | |||||||
G+C Difference (%): 0.17999999999999972
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanolobus tindarius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanolobus tindarius / qualifier | |||||||
16S Identity %: 85.30239099859352
| |||||||
| Property / Comparison to close relatives: Methanolobus tindarius / qualifier | |||||||
POCPu: 18.705882352941178
| |||||||
| Property / Comparison to close relatives: Methanolobus tindarius / qualifier | |||||||
G+C Difference (%): 1.5399999999999991
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanolobus vulcani / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanolobus vulcani / qualifier | |||||||
16S Identity %: 85.27131782945736
| |||||||
| Property / Comparison to close relatives: Methanolobus vulcani / qualifier | |||||||
POCPu: 19.83755845434408
| |||||||
| Property / Comparison to close relatives: Methanolobus vulcani / qualifier | |||||||
G+C Difference (%): 1.1299999999999955
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methermicoccus shengliensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier | |||||||
16S Identity %: 85.17964071856288
| |||||||
| Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier | |||||||
POCPu: 20.06194081211287
| |||||||
| Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier | |||||||
G+C Difference (%): 13.240000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothrix soehngenii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothrix soehngenii / qualifier | |||||||
16S Identity %: 85.03401360544217
| |||||||
| Property / Comparison to close relatives: Methanothrix soehngenii / qualifier | |||||||
POCPu: 15.101289134438305
| |||||||
| Property / Comparison to close relatives: Methanothrix soehngenii / qualifier | |||||||
G+C Difference (%): 9.660000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanimicrococcus blatticola / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanimicrococcus blatticola / qualifier | |||||||
16S Identity %: 84.78561549100968
| |||||||
| Property / Comparison to close relatives: Methanimicrococcus blatticola / qualifier | |||||||
POCPu: 16.900420757363253
| |||||||
| Property / Comparison to close relatives: Methanimicrococcus blatticola / qualifier | |||||||
G+C Difference (%): 0.6499999999999986
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothrix thermoacetophila / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier | |||||||
16S Identity %: 84.36437797416724
| |||||||
| Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier | |||||||
POCPu: 20.251126851255634
| |||||||
| Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier | |||||||
G+C Difference (%): 12.219999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanoplanus limicola / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanoplanus limicola / qualifier | |||||||
16S Identity %: 83.97524071526823
| |||||||
| Property / Comparison to close relatives: Methanoplanus limicola / qualifier | |||||||
POCPu: 9.75609756097561
| |||||||
| Property / Comparison to close relatives: Methanoplanus limicola / qualifier | |||||||
G+C Difference (%): 0.8599999999999994
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanoculleus palmolei / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanoculleus palmolei / qualifier | |||||||
16S Identity %: 83.97480755773267
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanogenium cariaci / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanogenium cariaci / qualifier | |||||||
16S Identity %: 83.81344307270233
| |||||||
| Property / Comparison to close relatives: Methanogenium cariaci / qualifier | |||||||
POCPu: 7.909502262443439
| |||||||
| Property / Comparison to close relatives: Methanogenium cariaci / qualifier | |||||||
G+C Difference (%): 10.730000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanoplanus endosymbiosus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanoplanus endosymbiosus / qualifier | |||||||
16S Identity %: 83.60655737704919
| |||||||
| Property / Comparison to close relatives: Methanoplanus endosymbiosus / qualifier | |||||||
POCPu: 9.831730769230768
| |||||||
| Property / Comparison to close relatives: Methanoplanus endosymbiosus / qualifier | |||||||
G+C Difference (%): 0.9500000000000028
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanoculleus marisnigri / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier | |||||||
16S Identity %: 83.48122866894198
| |||||||
| Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier | |||||||
POCPu: 10.537463595446122
| |||||||
| Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier | |||||||
G+C Difference (%): 20.730000000000004
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH65 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH65 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH161 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH161 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH15 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH15 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH133 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH133 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH6 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH57 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH57 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH105 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH105 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT0 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT20 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT20 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE9 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM57 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM57 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM2 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acylglycerol degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acylglycerol degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Heme biosynthesis, archaea, siroheme => heme / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Heme biosynthesis, archaea, siroheme => heme / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glutamine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glutamine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arginine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arginine degradation I / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0.3
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0.25
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 03:53, 8 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_012910725.1 |
genome assembly |
Statements
no current description - please contribute here
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