GCA_011045925.1 (Q76303): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 24.285714285714285 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (182 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
POCPu: 2.49546279491833
| |||||||
| Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier | |||||||
G+C Difference (%): 6.619999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus sibiricus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus sibiricus / qualifier | |||||||
16S Identity %: 24.269204622705644
| |||||||
| Property / Comparison to close relatives: Thermococcus sibiricus / qualifier | |||||||
POCPu: 2.4595687331536387
| |||||||
| Property / Comparison to close relatives: Thermococcus sibiricus / qualifier | |||||||
G+C Difference (%): 1.6699999999999946
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
16S Identity %: 23.624823695345558
| |||||||
| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
POCPu: 2.4741506646971936
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| Property / Comparison to close relatives: Methanocaldococcus vulcanius / qualifier | |||||||
G+C Difference (%): 10.29
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus profundus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus profundus / qualifier | |||||||
16S Identity %: 23.426573426573427
| |||||||
| Property / Comparison to close relatives: Thermococcus profundus / qualifier | |||||||
POCPu: 2.7370478983382207
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| Property / Comparison to close relatives: Thermococcus profundus / qualifier | |||||||
G+C Difference (%): 11.220000000000006
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus lauensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus lauensis / qualifier | |||||||
16S Identity %: 23.413897280966765
| |||||||
| Property / Comparison to close relatives: Methanocaldococcus lauensis / qualifier | |||||||
POCPu: 2.9353431178103926
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| Property / Comparison to close relatives: Methanocaldococcus lauensis / qualifier | |||||||
G+C Difference (%): 12.819999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus thermotolerans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus thermotolerans / qualifier | |||||||
16S Identity %: 23.292349726775956
| |||||||
| Property / Comparison to close relatives: Thermococcus thermotolerans / qualifier | |||||||
POCPu: 2.820830750154991
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| Property / Comparison to close relatives: Thermococcus thermotolerans / qualifier | |||||||
G+C Difference (%): 11.620000000000005
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus celer / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus celer / qualifier | |||||||
16S Identity %: 23.23446327683616
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| Property / Comparison to close relatives: Thermococcus celer / qualifier | |||||||
POCPu: 2.8629856850715747
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| Property / Comparison to close relatives: Thermococcus celer / qualifier | |||||||
G+C Difference (%): 14.580000000000005
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus barossii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus barossii / qualifier | |||||||
16S Identity %: 23.216783216783217
| |||||||
| Property / Comparison to close relatives: Thermococcus barossii / qualifier | |||||||
POCPu: 3.051643192488263
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| Property / Comparison to close relatives: Thermococcus barossii / qualifier | |||||||
G+C Difference (%): 12.82
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanotorris igneus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
16S Identity %: 23.15573770491803
| |||||||
| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
POCPu: 2.7085590465872156
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| Property / Comparison to close relatives: Methanotorris igneus / qualifier | |||||||
G+C Difference (%): 9.57
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus hydrothermalis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus hydrothermalis / qualifier | |||||||
16S Identity %: 23.15270935960591
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus nautili / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus nautili / qualifier | |||||||
16S Identity %: 23.120168657765287
| |||||||
| Property / Comparison to close relatives: Thermococcus nautili / qualifier | |||||||
POCPu: 2.6854219948849107
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| Property / Comparison to close relatives: Thermococcus nautili / qualifier | |||||||
G+C Difference (%): 12.970000000000006
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus thioreducens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus thioreducens / qualifier | |||||||
16S Identity %: 23.119777158774372
| |||||||
| Property / Comparison to close relatives: Thermococcus thioreducens / qualifier | |||||||
POCPu: 2.6412776412776413
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| Property / Comparison to close relatives: Thermococcus thioreducens / qualifier | |||||||
G+C Difference (%): 11.580000000000005
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus cleftensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus cleftensis / qualifier | |||||||
16S Identity %: 22.993197278911566
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| Property / Comparison to close relatives: Thermococcus cleftensis / qualifier | |||||||
POCPu: 2.9460443561734526
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| Property / Comparison to close relatives: Thermococcus cleftensis / qualifier | |||||||
G+C Difference (%): 13.950000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
16S Identity %: 22.966507177033492
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| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
POCPu: 2.8551771585827312
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| Property / Comparison to close relatives: Methanotorris formicicus / qualifier | |||||||
G+C Difference (%): 9.43
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus fumicolans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus fumicolans / qualifier | |||||||
16S Identity %: 22.963483146067414
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier | |||||||
16S Identity %: 22.949689869055824
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| Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier | |||||||
POCPu: 2.544625902012913
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| Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier | |||||||
G+C Difference (%): 8.979999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus siculi / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus siculi / qualifier | |||||||
16S Identity %: 22.87719298245614
| |||||||
| Property / Comparison to close relatives: Thermococcus siculi / qualifier | |||||||
POCPu: 2.7228525121555913
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| Property / Comparison to close relatives: Thermococcus siculi / qualifier | |||||||
G+C Difference (%): 13.120000000000005
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermococcus prieurii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermococcus prieurii / qualifier | |||||||
16S Identity %: 22.86764705882353
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus villosus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus villosus / qualifier | |||||||
16S Identity %: 22.855181880576527
| |||||||
| Property / Comparison to close relatives: Methanocaldococcus villosus / qualifier | |||||||
POCPu: 3.053763440860215
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| Property / Comparison to close relatives: Methanocaldococcus villosus / qualifier | |||||||
G+C Difference (%): 12.369999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanothermococcus okinawensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier | |||||||
16S Identity %: 22.693096377306905
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| Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier | |||||||
POCPu: 2.679938744257274
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| Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier | |||||||
G+C Difference (%): 12.589999999999996
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanococcus aeolicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
16S Identity %: 22.65571526351814
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| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
POCPu: 2.5080906148867315
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| Property / Comparison to close relatives: Methanococcus aeolicus / qualifier | |||||||
G+C Difference (%): 11.829999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanocaldococcus indicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanocaldococcus indicus / qualifier | |||||||
16S Identity %: 22.103004291845494
| |||||||
| Property / Carbon source | |||||||
| Property / Carbon source: starch / rank | |||||||
Normal rank | |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH57 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH57 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH19 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT3 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 9
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 6
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT35 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT35 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM12 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM12 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM48 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM48 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM5 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arginine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arginine degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetyl-CoA to acetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetyl-CoA to acetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactate production / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactate production / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 10:34, 7 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_011045925.1 |
genome assembly |
Statements
no current description - please contribute here
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