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GCA_009777615.1 (Q74387): Difference between revisions

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Created a new Item
 
Added qualifier: Relative abundance (%) (P19): 0.19
 
(328 intermediate revisions by the same user not shown)
Property / Protologue of the species
 
no current description - please contribute here
Property / Protologue of the species: no current description - please contribute here / rank
 
Normal rank
Property / Instance of
 
Property / Instance of: Genome Assembly Accession / rank
 
Normal rank
Property / GTDB
 
Property / GTDB: Archaea / rank
 
Normal rank
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylophilus alvi / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier
 
16S Identity %: 92.11977935382191
Amount92.11977935382191
Unit1
Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier
 
POCPu: 51.243138521149504
Amount51.243138521149504
Unit1
Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier
 
G+C Difference (%): 3.3300000000000054
Amount3.3300000000000054
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier
 
16S Identity %: 89.23829489867225
Amount89.23829489867225
Unit1
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier
 
POCPu: 23.878758008871365
Amount23.878758008871365
Unit1
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier
 
G+C Difference (%): 8.219999999999999
Amount8.219999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Cuniculiplasma divulgatum / rank
 
Normal rank
Property / Comparison to close relatives: Cuniculiplasma divulgatum / qualifier
 
16S Identity %: 79.26330150068213
Amount79.26330150068213
Unit1
Property / Comparison to close relatives: Cuniculiplasma divulgatum / qualifier
 
POCPu: 4.589301373867291
Amount4.589301373867291
Unit1
Property / Comparison to close relatives: Cuniculiplasma divulgatum / qualifier
 
G+C Difference (%): 14.96
Amount14.96
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix harundinacea / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
16S Identity %: 79.24107142857143
Amount79.24107142857143
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
POCPu: 6.3353077517383465
Amount6.3353077517383465
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
G+C Difference (%): 3.240000000000002
Amount3.240000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus levihalophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
16S Identity %: 78.87013939838592
Amount78.87013939838592
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
POCPu: 6.813246471226927
Amount6.813246471226927
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
G+C Difference (%): 9.739999999999995
Amount9.739999999999995
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus chelungpuianus / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
16S Identity %: 78.68098159509202
Amount78.68098159509202
Unit1
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
POCPu: 7.024586051179127
Amount7.024586051179127
Unit1
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
G+C Difference (%): 4.109999999999999
Amount4.109999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides orientis / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
16S Identity %: 78.67847411444143
Amount78.67847411444143
Unit1
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
POCPu: 6.963350785340314
Amount6.963350785340314
Unit1
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
G+C Difference (%): 9.579999999999998
Amount9.579999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides burtonii / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides burtonii / qualifier
 
16S Identity %: 78.66394001363327
Amount78.66394001363327
Unit1
Property / Comparison to close relatives: Methanococcoides burtonii / qualifier
 
POCPu: 6.967615309126594
Amount6.967615309126594
Unit1
Property / Comparison to close relatives: Methanococcoides burtonii / qualifier
 
G+C Difference (%): 11.5
Amount11.5
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus zinderi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
16S Identity %: 78.64938608458391
Amount78.64938608458391
Unit1
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
POCPu: 6.917475728155339
Amount6.917475728155339
Unit1
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
G+C Difference (%): 8.199999999999996
Amount8.199999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides methylutens / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
16S Identity %: 78.63013698630137
Amount78.63013698630137
Unit1
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
POCPu: 6.658163265306122
Amount6.658163265306122
Unit1
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
G+C Difference (%): 9.759999999999998
Amount9.759999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermogymnomonas acidicola / rank
 
Normal rank
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
16S Identity %: 78.61313868613139
Amount78.61313868613139
Unit1
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
POCPu: 5.4762412103132325
Amount5.4762412103132325
Unit1
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
G+C Difference (%): 4.170000000000002
Amount4.170000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermoplasma volcanium / rank
 
Normal rank
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
16S Identity %: 78.48876786929885
Amount78.48876786929885
Unit1
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
POCPu: 5.3565666343981935
Amount5.3565666343981935
Unit1
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
G+C Difference (%): 12.339999999999996
Amount12.339999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermoplasma acidophilum / rank
 
Normal rank
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
16S Identity %: 78.4741144414169
Amount78.4741144414169
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
POCPu: 5.773672055427252
Amount5.773672055427252
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
G+C Difference (%): 6.269999999999996
Amount6.269999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus mangrovi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
16S Identity %: 78.4741144414169
Amount78.4741144414169
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
POCPu: 7.535282258064516
Amount7.535282258064516
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
G+C Difference (%): 10.649999999999999
Amount10.649999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus sediminis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
16S Identity %: 78.33787465940054
Amount78.33787465940054
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
POCPu: 7.397590361445783
Amount7.397590361445783
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
G+C Difference (%): 11.32
Amount11.32
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides alaskense / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
16S Identity %: 78.32476120499634
Amount78.32476120499634
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
POCPu: 7.023933402705515
Amount7.023933402705515
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
G+C Difference (%): 10.57
Amount10.57
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans hollandica / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
16S Identity %: 78.3090783090783
Amount78.3090783090783
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
POCPu: 6.857003416300635
Amount6.857003416300635
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
G+C Difference (%): 10.39
Amount10.39
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus halotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
16S Identity %: 78.27019299499642
Amount78.27019299499642
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
POCPu: 6.545545047287208
Amount6.545545047287208
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
G+C Difference (%): 8.68
Amount8.68
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans thermophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans thermophila / qualifier
 
16S Identity %: 78.20324005891017
Amount78.20324005891017
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolinea tarda / rank
 
Normal rank
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
16S Identity %: 78.18181818181819
Amount78.18181818181819
Unit1
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
POCPu: 5.3274835474772795
Amount5.3274835474772795
Unit1
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
G+C Difference (%): 2.5700000000000003
Amount2.5700000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Picrophilus torridus / rank
 
Normal rank
Property / Comparison to close relatives: Picrophilus torridus / qualifier
 
16S Identity %: 78.12071330589849
Amount78.12071330589849
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalobium evestigatum / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
16S Identity %: 78.03706245710363
Amount78.03706245710363
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
POCPu: 6.597671410090557
Amount6.597671410090557
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
G+C Difference (%): 15.839999999999996
Amount15.839999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix soehngenii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
16S Identity %: 78.03547066848567
Amount78.03547066848567
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
POCPu: 5.677533821246396
Amount5.677533821246396
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
G+C Difference (%): 1.269999999999996
Amount1.269999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus mahii / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
16S Identity %: 77.99727520435967
Amount77.99727520435967
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
POCPu: 7.574884792626728
Amount7.574884792626728
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
G+C Difference (%): 9.64
Amount9.64
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Picrophilus oshimae / rank
 
Normal rank
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
16S Identity %: 77.99727520435967
Amount77.99727520435967
Unit1
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
POCPu: 5.480800787659994
Amount5.480800787659994
Unit1
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
G+C Difference (%): 16.28
Amount16.28
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus profundi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
16S Identity %: 77.96852646638054
Amount77.96852646638054
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
POCPu: 6.863417982155114
Amount6.863417982155114
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
G+C Difference (%): 9.689999999999998
Amount9.689999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus halophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
16S Identity %: 77.96030116358659
Amount77.96030116358659
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
POCPu: 7.7164904258359535
Amount7.7164904258359535
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
G+C Difference (%): 9.86
Amount9.86
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus bombayensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
16S Identity %: 77.93715846994536
Amount77.93715846994536
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
POCPu: 7.05039297272307
Amount7.05039297272307
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
G+C Difference (%): 12.54
Amount12.54
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans uponensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans uponensis / qualifier
 
16S Identity %: 77.93053545586108
Amount77.93053545586108
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Acidiplasma aeolicum / rank
 
Normal rank
Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier
 
16S Identity %: 77.9269202087994
Amount77.9269202087994
Unit1
Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier
 
POCPu: 4.52322738386308
Amount4.52322738386308
Unit1
Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier
 
G+C Difference (%): 18.28
Amount18.28
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina semesiae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina semesiae / qualifier
 
16S Identity %: 77.89327789327788
Amount77.89327789327788
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix thermoacetophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
16S Identity %: 77.77777777777779
Amount77.77777777777779
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
POCPu: 8.162641394069093
Amount8.162641394069093
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
G+C Difference (%): 1.2899999999999991
Amount1.2899999999999991
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanotorris igneus / rank
 
Normal rank
Property / Comparison to close relatives: Methanotorris igneus / qualifier
 
16S Identity %: 77.67918088737201
Amount77.67918088737201
Unit1
Property / Comparison to close relatives: Methanotorris igneus / qualifier
 
POCPu: 7.462686567164178
Amount7.462686567164178
Unit1
Property / Comparison to close relatives: Methanotorris igneus / qualifier
 
G+C Difference (%): 19.96
Amount19.96
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosphaerula palustris / rank
 
Normal rank
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
16S Identity %: 77.6559287183002
Amount77.6559287183002
Unit1
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
POCPu: 5.613207547169812
Amount5.613207547169812
Unit1
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
G+C Difference (%): 3.0900000000000034
Amount3.0900000000000034
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus oregonensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus oregonensis / qualifier
 
16S Identity %: 77.65205091937766
Amount77.65205091937766
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum natronophilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
16S Identity %: 77.63888888888889
Amount77.63888888888889
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
POCPu: 7.344797435150102
Amount7.344797435150102
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
G+C Difference (%): 17.919999999999995
Amount17.919999999999995
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanotorris formicicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
16S Identity %: 77.59562841530054
Amount77.59562841530054
Unit1
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
POCPu: 6.98626132709734
Amount6.98626132709734
Unit1
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
G+C Difference (%): 19.82
Amount19.82
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Acidiplasma cupricumulans / rank
 
Normal rank
Property / Comparison to close relatives: Acidiplasma cupricumulans / qualifier
 
16S Identity %: 77.51561415683554
Amount77.51561415683554
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus psychrotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
16S Identity %: 77.41243745532523
Amount77.41243745532523
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
POCPu: 6.4879477359765705
Amount6.4879477359765705
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
G+C Difference (%): 10.93
Amount10.93
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus thermophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
16S Identity %: 77.40152038700761
Amount77.40152038700761
Unit1
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
POCPu: 6.837146702557201
Amount6.837146702557201
Unit1
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
G+C Difference (%): 7.060000000000002
Amount7.060000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina vacuolata / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
16S Identity %: 77.35978112175103
Amount77.35978112175103
Unit1
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
POCPu: 6.118914758514528
Amount6.118914758514528
Unit1
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
G+C Difference (%): 12.549999999999997
Amount12.549999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoregula boonei / rank
 
Normal rank
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
16S Identity %: 77.33887733887734
Amount77.33887733887734
Unit1
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
POCPu: 6.1418901980446226
Amount6.1418901980446226
Unit1
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
G+C Difference (%): 2.25
Amount2.25
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocella arvoryzae / rank
 
Normal rank
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
16S Identity %: 77.31607629427792
Amount77.31607629427792
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
POCPu: 5.7011795543905635
Amount5.7011795543905635
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
G+C Difference (%): 2.3400000000000034
Amount2.3400000000000034
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus taylorii / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus taylorii / qualifier
 
16S Identity %: 77.21160651096956
Amount77.21160651096956
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina siciliae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
16S Identity %: 77.1701982228298
Amount77.1701982228298
Unit1
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
POCPu: 5.446240337315531
Amount5.446240337315531
Unit1
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
G+C Difference (%): 9.32
Amount9.32
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus marisnigri / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
16S Identity %: 77.13894592744695
Amount77.13894592744695
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
POCPu: 6.062912227295788
Amount6.062912227295788
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
G+C Difference (%): 9.800000000000004
Amount9.800000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
16S Identity %: 77.13498622589532
Amount77.13498622589532
Unit1
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
POCPu: 6.5459167461074035
Amount6.5459167461074035
Unit1
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
G+C Difference (%): 19.369999999999997
Amount19.369999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermococcus okinawensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
16S Identity %: 77.11748633879782
Amount77.11748633879782
Unit1
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
POCPu: 6.269993602047346
Amount6.269993602047346
Unit1
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
G+C Difference (%): 22.979999999999997
Amount22.979999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus hydrogenitrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus hydrogenitrophicus / qualifier
 
16S Identity %: 77.06293706293707
Amount77.06293706293707
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus vulcani / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
16S Identity %: 76.66195190947667
Amount76.66195190947667
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
POCPu: 7.024597918637654
Amount7.024597918637654
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
G+C Difference (%): 12.059999999999995
Amount12.059999999999995
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH19 / rank
 
Normal rank
Property / CAZyme: GH19 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT7 / rank
 
Normal rank
Property / CAZyme: GT7 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT13 / rank
 
Normal rank
Property / CAZyme: GT13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 5
Amount5
Unit1
Property / CAZyme
 
Property / CAZyme: PL0 / rank
 
Normal rank
Property / CAZyme: PL0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM48 / rank
 
Normal rank
Property / CAZyme: CBM48 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: CBM13 / rank
 
Normal rank
Property / CAZyme: CBM13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM5 / rank
 
Normal rank
Property / CAZyme: CBM5 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Proline biosynthesis, glutamate => proline / rank
 
Normal rank
Property / Pathway: Proline biosynthesis, glutamate => proline / qualifier
 
Property / Pathway
 
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / rank
 
Normal rank
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / rank
 
Normal rank
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / qualifier
 
Property / Pathway
 
Property / Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea / rank
 
Normal rank
Property / Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, methanol => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, methanol => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Methionine degradation I / rank
 
Normal rank
Property / Pathway: Methionine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Methanol conversion / rank
 
Normal rank
Property / Pathway: Methanol conversion / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 1.3
Amount1.3
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.1
Amount0.1
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 9.4
Amount9.4
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0.21
Amount0.21
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.6
Amount0.6
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.08
Amount0.08
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 3.3
Amount3.3
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 2.8
Amount2.8
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.04
Amount0.04
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 4.8
Amount4.8
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.55
Amount0.55
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.19
Amount0.19
Unit1

Latest revision as of 23:43, 6 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_009777615.1
    genome assembly

      Statements

      no current description - please contribute here
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