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‎Added qualifier: Ecosystem (P27): Generic (Q43559)
 
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Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Threonine biosynthesis, aspartate => homoserine => threonine / rank
 
Normal rank
Property / Pathway: Threonine biosynthesis, aspartate => homoserine => threonine / qualifier
 
Property / Pathway
 
Property / Pathway: Serine biosynthesis, glycerate-3P => serine / rank
 
Normal rank
Property / Pathway: Serine biosynthesis, glycerate-3P => serine / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / rank
 
Normal rank
Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD / rank
 
Normal rank
Property / Pathway: Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD / qualifier
 
Property / Pathway
 
Property / Pathway: Cytochrome bc1 complex respiratory unit / rank
 
Normal rank
Property / Pathway: Cytochrome bc1 complex respiratory unit / qualifier
 
Property / Pathway
 
Property / Pathway: CAM (Crassulacean acid metabolism), light / rank
 
Normal rank
Property / Pathway: CAM (Crassulacean acid metabolism), light / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / rank
 
Normal rank
Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / qualifier
 
Property / Pathway
 
Property / Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin / rank
 
Normal rank
Property / Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: Fatty acid biosynthesis, elongation / rank
 
Normal rank
Property / Pathway: Fatty acid biosynthesis, elongation / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamine degradation II / rank
 
Normal rank
Property / Pathway: Glutamine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 1.7
Amount1.7
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 53.1
Amount53.1
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 2.33
Amount2.33
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0.6
Amount0.6
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 4.8
Amount4.8
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.12
Amount0.12
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 1
Amount1
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.11
Amount0.11
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 1.2
Amount1.2
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 2.6
Amount2.6
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 4.8
Amount4.8
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.17
Amount0.17
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0.8
Amount0.8
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: 3300027749_48.fna / rank
 
Normal rank
Property / MAGs: 3300027749_48.fna / qualifier
 

Latest revision as of 14:00, 16 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_000371745.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Terrihabitans soli
      16S Identity %
      85.3641933287951
      POCPu
      6.967213114754098
      G+C Difference (%)
      32.39
      0 references
      Flaviflagellibacter deserti
      16S Identity %
      85.33619456366237
      0 references
      Pleomorphomonas oryzae
      16S Identity %
      84.92117888965045
      POCPu
      4.639914009315658
      G+C Difference (%)
      33.150000000000006
      0 references
      Dongia rigui
      16S Identity %
      84.63172804532579
      POCPu
      5.769614693551607
      G+C Difference (%)
      32.760000000000005
      0 references
      Dichotomicrobium thermohalophilum
      16S Identity %
      84.59441036128152
      POCPu
      8.309699376063529
      G+C Difference (%)
      34.45
      0 references
      Kordiimonas lipolytica
      16S Identity %
      84.5788043478261
      0 references
      Afipia broomeae
      16S Identity %
      84.35374149659864
      POCPu
      5.374677002583979
      G+C Difference (%)
      31.470000000000002
      0 references
      Pelagibacterium lacus
      16S Identity %
      84.30706521739131
      POCPu
      6.243628950050968
      G+C Difference (%)
      34.66
      0 references
      Mariluticola halotolerans
      16S Identity %
      84.30706521739131
      POCPu
      6.071161980592187
      G+C Difference (%)
      28.349999999999998
      0 references
      Ensifer alkalisoli
      16S Identity %
      84.29248476641843
      0 references
      Devosia psychrophila
      16S Identity %
      84.1711956521739
      POCPu
      4.470996338408171
      G+C Difference (%)
      31.26
      0 references
      Mesorhizobium alhagi
      16S Identity %
      84.1570751523358
      POCPu
      3.9821849620120515
      G+C Difference (%)
      32.81
      0 references
      Bradyrhizobium namibiense
      16S Identity %
      84.1108857336038
      0 references
      Ensifer mexicanus
      16S Identity %
      84.0877914951989
      0 references
      Bradyrhizobium oligotrophicum
      16S Identity %
      84.07859078590786
      POCPu
      3.763101401692133
      G+C Difference (%)
      35.28999999999999
      0 references
      Devosia beringensis
      16S Identity %
      84.03886190145732
      POCPu
      5.087303298124596
      G+C Difference (%)
      34
      0 references
      Butyratibacter algicola
      16S Identity %
      84.02166553825322
      0 references
      Ensifer canadensis
      16S Identity %
      84.02166553825322
      POCPu
      3.463766402648067
      G+C Difference (%)
      31.12
      0 references
      Bradyrhizobium mercantei
      16S Identity %
      84.01639344262296
      POCPu
      3.683199638458931
      G+C Difference (%)
      34.150000000000006
      0 references
      Bradyrhizobium viridifuturi
      16S Identity %
      84.00546821599453
      POCPu
      3.467420909281375
      G+C Difference (%)
      34.19
      0 references
      Aliidongia dinghuensis
      16S Identity %
      84.00277008310249
      POCPu
      4.326923076923077
      G+C Difference (%)
      37.129999999999995
      0 references
      Neorhizobium tomejilense
      16S Identity %
      83.97827562797013
      POCPu
      3.998298596341982
      G+C Difference (%)
      31.610000000000003
      0 references
      Roseospirillum parvum
      16S Identity %
      83.97565922920892
      0 references
      Bradyrhizobium ripae
      16S Identity %
      83.94308943089432
      0 references
      Bradyrhizobium elkanii
      16S Identity %
      83.921302578019
      POCPu
      3.4752210569607236
      G+C Difference (%)
      33.870000000000005
      0 references
      Aminobacter aminovorans
      16S Identity %
      83.91274710293115
      POCPu
      4.665314401622718
      G+C Difference (%)
      33.349999999999994
      0 references
      Bradyrhizobium pachyrhizi
      16S Identity %
      83.81855111712932
      POCPu
      3.6475181260457332
      G+C Difference (%)
      33.879999999999995
      0 references
      Devosia epidermidihirudinis
      16S Identity %
      83.81855111712932
      POCPu
      5.336012502790802
      G+C Difference (%)
      31.250000000000004
      0 references
      Mesorhizobium norvegicum
      16S Identity %
      83.80952380952381
      POCPu
      3.7911961281401245
      G+C Difference (%)
      32.56999999999999
      0 references
      Bradyrhizobium australafricanum
      16S Identity %
      83.80758807588076
      POCPu
      3.486238532110092
      G+C Difference (%)
      33.68000000000001
      0 references
      Devosia chinhatensis
      16S Identity %
      83.79661016949153
      POCPu
      5.810247609708262
      G+C Difference (%)
      32.510000000000005
      0 references
      Pseudemcibacter aquimaris
      16S Identity %
      83.7947332883187
      POCPu
      6.556955515556698
      G+C Difference (%)
      12.91
      0 references
      Bradyrhizobium australiense
      16S Identity %
      83.79120879120879
      POCPu
      3.960146298398285
      G+C Difference (%)
      32.040000000000006
      0 references
      Bradyrhizobium jicamae
      16S Identity %
      83.75084631008801
      POCPu
      3.579689393104968
      G+C Difference (%)
      32.39
      0 references
      Devosia honganensis
      16S Identity %
      83.7144837144837
      0 references
      Bartonella apis
      16S Identity %
      83.7052062204192
      POCPu
      7.8331637843336726
      G+C Difference (%)
      15.610000000000003
      0 references
      Devosia glacialis
      16S Identity %
      83.69565217391305
      0 references
      Pelagibacterium lentulum
      16S Identity %
      83.69039391845196
      POCPu
      5.215419501133787
      G+C Difference (%)
      27.830000000000002
      0 references
      Mesorhizobium tamadayense
      16S Identity %
      83.6734693877551
      POCPu
      4.180225281602003
      G+C Difference (%)
      33.33
      0 references
      Pseudahrensia aquimaris
      16S Identity %
      83.66921473245309
      0 references
      Devosia faecipullorum
      16S Identity %
      83.66101694915254
      POCPu
      5.892634207240949
      G+C Difference (%)
      32.349999999999994
      0 references
      Segnochrobactrum spirostomi
      16S Identity %
      83.61543669600542
      POCPu
      5.288808664259928
      G+C Difference (%)
      38.44
      0 references
      Devosia neptuniae
      16S Identity %
      83.59322033898306
      POCPu
      4.4283861404483975
      G+C Difference (%)
      32.31999999999999
      0 references
      Ahrensia kielensis
      16S Identity %
      83.53825136612022
      POCPu
      5.962264150943397
      G+C Difference (%)
      18.19
      0 references
      Pararhizobium antarcticum
      16S Identity %
      83.48002708192281
      POCPu
      4.629160331137017
      G+C Difference (%)
      30.830000000000002
      0 references
      Rhodospirillum rubrum
      16S Identity %
      83.44640434192672
      POCPu
      5.826703934637712
      G+C Difference (%)
      35.53999999999999
      0 references
      Methylosinus trichosporium
      16S Identity %
      83.4235453315291
      POCPu
      4.448919809593555
      G+C Difference (%)
      35.95
      0 references
      Devosia marina
      16S Identity %
      83.34461746784022
      POCPu
      5.316792202038104
      G+C Difference (%)
      31.49
      0 references
      Oricola indica
      16S Identity %
      83.29952670723462
      POCPu
      4.885764499121265
      G+C Difference (%)
      32.25
      0 references
      Hoeflea phototrophica
      16S Identity %
      83.23191345503719
      POCPu
      5.4931836407377705
      G+C Difference (%)
      29.959999999999997
      0 references
      Sinorhizobium alkalisoli
      POCPu
      4.510467980295566
      G+C Difference (%)
      32.400000000000006
      0 references
      Sinorhizobium mexicanum
      POCPu
      3.759500542888165
      G+C Difference (%)
      31.610000000000003
      0 references
      CAZyme
      GH6
      Occurance
      1
      0 references
      GH23
      Occurance
      1
      0 references
      GH28
      Occurance
      1
      0 references
      GH13
      Occurance
      1
      0 references
      GH43
      Occurance
      1
      0 references
      GH16
      Occurance
      1
      0 references
      GH0
      Occurance
      1
      0 references
      GH103
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT4
      Occurance
      7
      0 references
      GT41
      Occurance
      2
      0 references
      GT2
      Occurance
      5
      0 references
      GT28
      Occurance
      3
      0 references
      GT83
      Occurance
      1
      0 references
      GT30
      Occurance
      1
      0 references
      GT9
      Occurance
      1
      0 references
      GT19
      Occurance
      1
      0 references
      GT51
      Occurance
      1
      0 references
      PL0
      Occurance
      1
      0 references
      CE12
      Occurance
      1
      0 references
      CE11
      Occurance
      1
      0 references
      CBM13
      Occurance
      1
      0 references
      CBM50
      Occurance
      3
      0 references
      CBM48
      Occurance
      1
      0 references
      Pathway
      Ecosystem
       
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