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GCA_006954465.1 (Q72424): Difference between revisions

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Created a new Item
 
Added qualifier: Ecosystem (P27): Human (Q43674)
 
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Property / Protologue of the species
 
no current description - please contribute here
Property / Protologue of the species: no current description - please contribute here / rank
 
Normal rank
Property / Instance of
 
Property / Instance of: Genome Assembly Accession / rank
 
Normal rank
Property / GTDB
 
Property / GTDB: Archaea / rank
 
Normal rank
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylophilus alvi / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier
 
16S Identity %: 93.45941686367219
Amount93.45941686367219
Unit1
Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier
 
POCPu: 39.919103920348476
Amount39.919103920348476
Unit1
Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier
 
ANI %: 78.0827
Amount78.0827
Unit1
Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier
 
G+C Difference (%): 2.509999999999998
Amount2.509999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier
 
16S Identity %: 88.0503144654088
Amount88.0503144654088
Unit1
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier
 
POCPu: 17.77245508982036
Amount17.77245508982036
Unit1
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier
 
G+C Difference (%): 2.3799999999999955
Amount2.3799999999999955
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermoplasma volcanium / rank
 
Normal rank
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
16S Identity %: 78.35262083049693
Amount78.35262083049693
Unit1
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
POCPu: 4.228855721393035
Amount4.228855721393035
Unit1
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
G+C Difference (%): 18.18
Amount18.18
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermoplasma acidophilum / rank
 
Normal rank
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
16S Identity %: 78.2016348773842
Amount78.2016348773842
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
POCPu: 3.8437102922490465
Amount3.8437102922490465
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
G+C Difference (%): 12.11
Amount12.11
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermogymnomonas acidicola / rank
 
Normal rank
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
16S Identity %: 78.17518248175183
Amount78.17518248175183
Unit1
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
POCPu: 4.012474012474013
Amount4.012474012474013
Unit1
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
G+C Difference (%): 1.6700000000000017
Amount1.6700000000000017
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Cuniculiplasma divulgatum / rank
 
Normal rank
Property / Comparison to close relatives: Cuniculiplasma divulgatum / qualifier
 
16S Identity %: 78.11860940695297
Amount78.11860940695297
Unit1
Property / Comparison to close relatives: Cuniculiplasma divulgatum / qualifier
 
POCPu: 3.0243075183719617
Amount3.0243075183719617
Unit1
Property / Comparison to close relatives: Cuniculiplasma divulgatum / qualifier
 
G+C Difference (%): 20.800000000000004
Amount20.800000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Acidiplasma aeolicum / rank
 
Normal rank
Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier
 
16S Identity %: 77.62863534675614
Amount77.62863534675614
Unit1
Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier
 
POCPu: 3.452345824727058
Amount3.452345824727058
Unit1
Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier
 
G+C Difference (%): 24.120000000000005
Amount24.120000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Picrophilus torridus / rank
 
Normal rank
Property / Comparison to close relatives: Picrophilus torridus / qualifier
 
16S Identity %: 77.50342935528121
Amount77.50342935528121
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Picrophilus oshimae / rank
 
Normal rank
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
16S Identity %: 77.24795640326975
Amount77.24795640326975
Unit1
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
POCPu: 3.6662452591656134
Amount3.6662452591656134
Unit1
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
G+C Difference (%): 22.120000000000005
Amount22.120000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus zinderi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
16S Identity %: 77.18579234972678
Amount77.18579234972678
Unit1
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
POCPu: 4.979938635827237
Amount4.979938635827237
Unit1
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
G+C Difference (%): 14.04
Amount14.04
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix harundinacea / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
16S Identity %: 77.15773809523809
Amount77.15773809523809
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
POCPu: 4.95
Amount4.95
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
G+C Difference (%): 2.6000000000000014
Amount2.6000000000000014
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Acidiplasma cupricumulans / rank
 
Normal rank
Property / Comparison to close relatives: Acidiplasma cupricumulans / qualifier
 
16S Identity %: 77.04576976421636
Amount77.04576976421636
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides methylutens / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
16S Identity %: 76.95473251028807
Amount76.95473251028807
Unit1
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
POCPu: 4.85509041367352
Amount4.85509041367352
Unit1
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
G+C Difference (%): 15.600000000000001
Amount15.600000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides orientis / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
16S Identity %: 76.94406548431105
Amount76.94406548431105
Unit1
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
POCPu: 5.003810007620015
Amount5.003810007620015
Unit1
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
G+C Difference (%): 15.420000000000002
Amount15.420000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus mangrovi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
16S Identity %: 76.83923705722071
Amount76.83923705722071
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
POCPu: 5.336597307221543
Amount5.336597307221543
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
G+C Difference (%): 16.490000000000002
Amount16.490000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides burtonii / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides burtonii / qualifier
 
16S Identity %: 76.82344921608725
Amount76.82344921608725
Unit1
Property / Comparison to close relatives: Methanococcoides burtonii / qualifier
 
POCPu: 4.769854519437157
Amount4.769854519437157
Unit1
Property / Comparison to close relatives: Methanococcoides burtonii / qualifier
 
G+C Difference (%): 17.340000000000003
Amount17.340000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix soehngenii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
16S Identity %: 76.80763983628923
Amount76.80763983628923
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
POCPu: 3.5667963683527883
Amount3.5667963683527883
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
G+C Difference (%): 7.109999999999999
Amount7.109999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus chelungpuianus / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
16S Identity %: 76.68711656441718
Amount76.68711656441718
Unit1
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
POCPu: 5.0450889592980745
Amount5.0450889592980745
Unit1
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
G+C Difference (%): 9.950000000000003
Amount9.950000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Ferroplasma acidiphilum / rank
 
Normal rank
Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier
 
16S Identity %: 76.61346287300486
Amount76.61346287300486
Unit1
Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier
 
POCPu: 3.5221602582917524
Amount3.5221602582917524
Unit1
Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier
 
G+C Difference (%): 21.61
Amount21.61
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus halotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
16S Identity %: 76.59269863994274
Amount76.59269863994274
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
POCPu: 4.449818621523579
Amount4.449818621523579
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
G+C Difference (%): 14.520000000000003
Amount14.520000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans thermophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans thermophila / qualifier
 
16S Identity %: 76.50957290132547
Amount76.50957290132547
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina semesiae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina semesiae / qualifier
 
16S Identity %: 76.50727650727652
Amount76.50727650727652
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum natronophilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
16S Identity %: 76.45833333333333
Amount76.45833333333333
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
POCPu: 5.608793686583991
Amount5.608793686583991
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
G+C Difference (%): 23.759999999999998
Amount23.759999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanotorris formicicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
16S Identity %: 76.4344262295082
Amount76.4344262295082
Unit1
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
POCPu: 4.918032786885246
Amount4.918032786885246
Unit1
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
G+C Difference (%): 25.660000000000004
Amount25.660000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalobium evestigatum / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
16S Identity %: 76.38984214138641
Amount76.38984214138641
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
POCPu: 5.072827724761426
Amount5.072827724761426
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
G+C Difference (%): 21.68
Amount21.68
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum zhilinae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
16S Identity %: 76.37517630465445
Amount76.37517630465445
Unit1
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
POCPu: 5.825242718446602
Amount5.825242718446602
Unit1
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
G+C Difference (%): 18.940000000000005
Amount18.940000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus sediminis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
16S Identity %: 76.36239782016348
Amount76.36239782016348
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
POCPu: 4.921490508554019
Amount4.921490508554019
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
G+C Difference (%): 17.160000000000004
Amount17.160000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides alaskense / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
16S Identity %: 76.34092578986039
Amount76.34092578986039
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
POCPu: 5.150214592274678
Amount5.150214592274678
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
G+C Difference (%): 16.410000000000004
Amount16.410000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix thermoacetophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
16S Identity %: 76.20995228357191
Amount76.20995228357191
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
POCPu: 5.873671782762692
Amount5.873671782762692
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
G+C Difference (%): 4.550000000000004
Amount4.550000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanotorris igneus / rank
 
Normal rank
Property / Comparison to close relatives: Methanotorris igneus / qualifier
 
16S Identity %: 76.17747440273037
Amount76.17747440273037
Unit1
Property / Comparison to close relatives: Methanotorris igneus / qualifier
 
POCPu: 5.4411764705882355
Amount5.4411764705882355
Unit1
Property / Comparison to close relatives: Methanotorris igneus / qualifier
 
G+C Difference (%): 25.800000000000004
Amount25.800000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocaldococcus infernus / rank
 
Normal rank
Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier
 
16S Identity %: 76.16120218579235
Amount76.16120218579235
Unit1
Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier
 
POCPu: 5.111402359108781
Amount5.111402359108781
Unit1
Property / Comparison to close relatives: Methanocaldococcus infernus / qualifier
 
G+C Difference (%): 24.480000000000004
Amount24.480000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus levihalophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
16S Identity %: 76.15553925165077
Amount76.15553925165077
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
POCPu: 5.498553012365167
Amount5.498553012365167
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
G+C Difference (%): 15.579999999999998
Amount15.579999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocella arvoryzae / rank
 
Normal rank
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
16S Identity %: 76.12551159618009
Amount76.12551159618009
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
POCPu: 4.621938232161874
Amount4.621938232161874
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
G+C Difference (%): 3.5
Amount3.5
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans hollandica / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
16S Identity %: 76.0914760914761
Amount76.0914760914761
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
POCPu: 5.100830367734282
Amount5.100830367734282
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
G+C Difference (%): 16.230000000000004
Amount16.230000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methermicoccus shengliensis / rank
 
Normal rank
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
16S Identity %: 76.06581899775617
Amount76.06581899775617
Unit1
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
POCPu: 6.587202007528231
Amount6.587202007528231
Unit1
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
G+C Difference (%): 3.530000000000001
Amount3.530000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus halophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
16S Identity %: 76.04380561259411
Amount76.04380561259411
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
POCPu: 5.779867256637168
Amount5.779867256637168
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
G+C Difference (%): 15.700000000000003
Amount15.700000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus profundi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
16S Identity %: 76.03719599427754
Amount76.03719599427754
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
POCPu: 4.991087344028521
Amount4.991087344028521
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
G+C Difference (%): 15.530000000000001
Amount15.530000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus bombayensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
16S Identity %: 76.02459016393442
Amount76.02459016393442
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
POCPu: 5.019131217645735
Amount5.019131217645735
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
G+C Difference (%): 18.380000000000003
Amount18.380000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus mahii / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
16S Identity %: 75.95367847411444
Amount75.95367847411444
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
POCPu: 5.711897464474784
Amount5.711897464474784
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
G+C Difference (%): 15.480000000000004
Amount15.480000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolinea tarda / rank
 
Normal rank
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
16S Identity %: 75.8041958041958
Amount75.8041958041958
Unit1
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
POCPu: 4.02055622732769
Amount4.02055622732769
Unit1
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
G+C Difference (%): 3.270000000000003
Amount3.270000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus thermophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
16S Identity %: 75.79529737206086
Amount75.79529737206086
Unit1
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
POCPu: 5.036534446764092
Amount5.036534446764092
Unit1
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
G+C Difference (%): 1.2199999999999989
Amount1.2199999999999989
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus psychrotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
16S Identity %: 75.76840600428878
Amount75.76840600428878
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
POCPu: 4.960491659350307
Amount4.960491659350307
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
G+C Difference (%): 16.770000000000003
Amount16.770000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina vacuolata / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
16S Identity %: 75.71819425444598
Amount75.71819425444598
Unit1
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
POCPu: 4.422280767783214
Amount4.422280767783214
Unit1
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
G+C Difference (%): 18.39
Amount18.39
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermococcus okinawensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
16S Identity %: 75.68306010928961
Amount75.68306010928961
Unit1
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
POCPu: 4.440333024976873
Amount4.440333024976873
Unit1
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
G+C Difference (%): 28.82
Amount28.82
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina horonobensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina horonobensis / qualifier
 
16S Identity %: 75.66807313642757
Amount75.66807313642757
Unit1
Property / Comparison to close relatives: Methanosarcina horonobensis / qualifier
 
POCPu: 4.138161188052728
Amount4.138161188052728
Unit1
Property / Comparison to close relatives: Methanosarcina horonobensis / qualifier
 
G+C Difference (%): 16.79
Amount16.79
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina siciliae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
16S Identity %: 75.5980861244019
Amount75.5980861244019
Unit1
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
POCPu: 3.9421587192287832
Amount3.9421587192287832
Unit1
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
G+C Difference (%): 15.160000000000004
Amount15.160000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
16S Identity %: 75.55096418732782
Amount75.55096418732782
Unit1
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
POCPu: 5.08578431372549
Amount5.08578431372549
Unit1
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
G+C Difference (%): 25.21
Amount25.21
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus marisnigri / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
16S Identity %: 75.23939808481532
Amount75.23939808481532
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
POCPu: 4.607046070460704
Amount4.607046070460704
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
G+C Difference (%): 3.960000000000001
Amount3.960000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcus aeolicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcus aeolicus / qualifier
 
16S Identity %: 75.05126452494873
Amount75.05126452494873
Unit1
Property / Comparison to close relatives: Methanococcus aeolicus / qualifier
 
POCPu: 4.221720915243313
Amount4.221720915243313
Unit1
Property / Comparison to close relatives: Methanococcus aeolicus / qualifier
 
G+C Difference (%): 28.060000000000002
Amount28.060000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus vulcani / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
16S Identity %: 74.68175388967468
Amount74.68175388967468
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
POCPu: 4.902186421173763
Amount4.902186421173763
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
G+C Difference (%): 17.9
Amount17.9
Unit1
Property / CAZyme
 
Property / CAZyme: GH28 / rank
 
Normal rank
Property / CAZyme: GH28 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH19 / rank
 
Normal rank
Property / CAZyme: GH19 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT7 / rank
 
Normal rank
Property / CAZyme: GT7 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 6
Amount6
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: CBM5 / rank
 
Normal rank
Property / CAZyme: CBM5 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank
 
Normal rank
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: Tryptophan biosynthesis, chorismate => tryptophan / rank
 
Normal rank
Property / Pathway: Tryptophan biosynthesis, chorismate => tryptophan / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0.8
Amount0.8
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 2
Amount2
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.07
Amount0.07
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 1.5
Amount1.5
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 4.6
Amount4.6
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0.57
Amount0.57
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.6
Amount0.6
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.08
Amount0.08
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.9
Amount0.9
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 1.7
Amount1.7
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 5.1
Amount5.1
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.05
Amount0.05
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 1.8
Amount1.8
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.12
Amount0.12
Unit1
Property / MAGs
 
Property / MAGs: BritoIL_2016__W3_22_ST__bin_129.fa / rank
 
Normal rank
Property / MAGs: BritoIL_2016__W3_22_ST__bin_129.fa / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_900768585.1_SRS476144_87_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_900768585.1_SRS476144_87_genomic.fna / qualifier
 

Latest revision as of 08:27, 6 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_006954465.1
    genome assembly

      Statements

      no current description - please contribute here
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