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‎Added qualifier: Relative abundance (%) (P19): 0
‎Added qualifier: Ecosystem (P27): Pig (Q65928)
 
(33 intermediate revisions by the same user not shown)
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.8
Amount0.8
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 1
Amount1
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 6
Amount6
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.31
Amount0.31
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.31
Amount0.31
Unit1
Property / MAGs
 
Property / MAGs: CosteaPI_2017__mickey2-11-30-0__bin_66.fa / rank
 
Normal rank
Property / MAGs: CosteaPI_2017__mickey2-11-30-0__bin_66.fa / qualifier
 
Property / MAGs
 
Property / MAGs: PIGvsB100pB20.1913.fa / rank
 
Normal rank
Property / MAGs: PIGvsB100pB20.1913.fa / qualifier
 

Latest revision as of 08:21, 6 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_006954405.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Methanomethylophilus alvi
      16S Identity %
      90.92344119968429
      POCPu
      47.05495228693649
      G+C Difference (%)
      7.950000000000003
      0 references
      Methanomassiliicoccus luminyensis
      16S Identity %
      88.74912648497553
      POCPu
      22.675
      G+C Difference (%)
      12.839999999999996
      0 references
      Cuniculiplasma divulgatum
      16S Identity %
      78.44474761255115
      POCPu
      4.490038655961938
      G+C Difference (%)
      10.340000000000003
      0 references
      Thermogymnomonas acidicola
      16S Identity %
      78.28947368421053
      POCPu
      5.7820927723840345
      G+C Difference (%)
      8.79
      0 references
      Acidiplasma aeolicum
      16S Identity %
      78.2089552238806
      POCPu
      4.729309271935283
      G+C Difference (%)
      13.660000000000004
      0 references
      Picrophilus torridus
      16S Identity %
      78.17433081674675
      0 references
      Thermoplasma volcanium
      16S Identity %
      78.06539509536785
      POCPu
      5.557382439986847
      G+C Difference (%)
      7.719999999999999
      0 references
      Picrophilus oshimae
      16S Identity %
      77.98227675528288
      POCPu
      5.185680829708933
      G+C Difference (%)
      11.660000000000004
      0 references
      Thermoplasma acidophilum
      16S Identity %
      77.98227675528288
      POCPu
      5.785401950891355
      G+C Difference (%)
      1.6499999999999986
      0 references
      Acidiplasma cupricumulans
      16S Identity %
      77.86259541984732
      0 references
      Methanothrix harundinacea
      16S Identity %
      77.82738095238095
      POCPu
      6.2745098039215685
      G+C Difference (%)
      7.859999999999999
      0 references
      Methanolobus sediminis
      16S Identity %
      77.79291553133515
      POCPu
      6.47605083088954
      G+C Difference (%)
      6.700000000000003
      0 references
      Methanolobus mangrovi
      16S Identity %
      77.79291553133515
      POCPu
      6.521739130434782
      G+C Difference (%)
      6.030000000000001
      0 references
      Methanolobus zinderi
      16S Identity %
      77.76261937244202
      POCPu
      6.20384047267356
      G+C Difference (%)
      3.5799999999999983
      0 references
      Methanococcoides orientis
      16S Identity %
      77.58855585831063
      POCPu
      6.59223817118554
      G+C Difference (%)
      4.960000000000001
      0 references
      Methanolobus bombayensis
      16S Identity %
      77.52732240437157
      POCPu
      6.115276476101219
      G+C Difference (%)
      7.920000000000002
      0 references
      Methanococcoides burtonii
      16S Identity %
      77.50511247443764
      POCPu
      6.172224987555998
      G+C Difference (%)
      6.880000000000003
      0 references
      Methanocella arvoryzae
      16S Identity %
      77.50511247443764
      POCPu
      5.995575221238938
      G+C Difference (%)
      6.960000000000001
      0 references
      Methanococcoides methylutens
      16S Identity %
      77.46575342465754
      POCPu
      6.29207664422579
      G+C Difference (%)
      5.140000000000001
      0 references
      Methanolobus psychrotolerans
      16S Identity %
      77.19799857040744
      POCPu
      5.7749372289431635
      G+C Difference (%)
      6.310000000000002
      0 references
      Methanolobus halotolerans
      16S Identity %
      77.1265189421015
      POCPu
      6.262626262626263
      G+C Difference (%)
      4.060000000000002
      0 references
      Methanolobus profundi
      16S Identity %
      77.1101573676681
      POCPu
      5.796429399489914
      G+C Difference (%)
      5.07
      0 references
      Methanosalsum natronophilum
      16S Identity %
      77.08333333333334
      POCPu
      6.7892084198043285
      G+C Difference (%)
      13.299999999999997
      0 references
      Methanomethylovorans hollandica
      16S Identity %
      77.06167706167706
      POCPu
      6.311881188118812
      G+C Difference (%)
      5.770000000000003
      0 references
      Methanohalobium evestigatum
      16S Identity %
      77.00754975978037
      POCPu
      6.094037299711059
      G+C Difference (%)
      11.219999999999999
      0 references
      Methanohalophilus halophilus
      16S Identity %
      77.00205338809035
      POCPu
      6.6259808195292065
      G+C Difference (%)
      5.240000000000002
      0 references
      Methanolinea tarda
      16S Identity %
      76.92307692307693
      POCPu
      4.819661666134696
      G+C Difference (%)
      7.189999999999998
      0 references
      Methanotorris formicicus
      16S Identity %
      76.91256830601093
      POCPu
      6.898602438299138
      G+C Difference (%)
      15.200000000000003
      0 references
      Methanohalophilus mahii
      16S Identity %
      76.90735694822888
      POCPu
      6.649091974223785
      G+C Difference (%)
      5.020000000000003
      0 references
      Ferroplasma acidiphilum
      16S Identity %
      76.80555555555556
      POCPu
      4.826732673267327
      G+C Difference (%)
      11.149999999999999
      0 references
      Methanoregula boonei
      16S Identity %
      76.78447678447678
      POCPu
      5.8763673365555835
      G+C Difference (%)
      6.869999999999997
      0 references
      Methanothrix thermoacetophila
      16S Identity %
      76.75528289025222
      POCPu
      7.749766573295985
      G+C Difference (%)
      5.909999999999997
      0 references
      Methanolobus oregonensis
      16S Identity %
      76.73267326732673
      0 references
      Methanosarcina semesiae
      16S Identity %
      76.57657657657657
      0 references
      Methanotorris igneus
      16S Identity %
      76.51877133105802
      POCPu
      7.224806201550388
      G+C Difference (%)
      15.340000000000003
      0 references
      Methanosphaerula palustris
      16S Identity %
      76.49074708704592
      POCPu
      5.380200860832137
      G+C Difference (%)
      7.710000000000001
      0 references
      Methanoculleus marisnigri
      16S Identity %
      76.47058823529412
      POCPu
      6.024716786817714
      G+C Difference (%)
      14.420000000000002
      0 references
      Methanothrix soehngenii
      16S Identity %
      76.46657571623466
      POCPu
      4.942709503482363
      G+C Difference (%)
      3.3500000000000014
      0 references
      Methanolacinia petrolearia
      16S Identity %
      76.36612021857924
      POCPu
      5.705492424242424
      G+C Difference (%)
      0.240000000000002
      0 references
      Methanothermococcus thermolithotrophicus
      16S Identity %
      76.3573883161512
      POCPu
      6.6364519261897055
      G+C Difference (%)
      14.75
      0 references
      Methanoculleus palmolei
      16S Identity %
      76.26050420168067
      0 references
      Methanoculleus thermophilus
      16S Identity %
      76.24309392265194
      POCPu
      6.972928630024611
      G+C Difference (%)
      11.68
      0 references
      Methanogenium cariaci
      16S Identity %
      76.18393960192176
      POCPu
      4.8117897727272725
      G+C Difference (%)
      4.420000000000002
      0 references
      Methanogenium frigidum
      16S Identity %
      76.18393960192176
      0 references
      Methanoculleus chikugoensis
      16S Identity %
      76.17379117028732
      POCPu
      5.9147869674185465
      G+C Difference (%)
      14.219999999999999
      0 references
      Halomarina oriensis
      16S Identity %
      76.0082023239918
      POCPu
      2.080761770410862
      G+C Difference (%)
      19.159999999999997
      0 references
      Methanolobus vulcani
      16S Identity %
      75.8840169731259
      POCPu
      6.18705035971223
      G+C Difference (%)
      7.439999999999998
      0 references
      Methanothermococcus okinawensis
      16S Identity %
      75.80095432856169
      POCPu
      6.844850065189048
      G+C Difference (%)
      18.36
      0 references
      Methanococcus vannielii
      16S Identity %
      75.20491803278688
      POCPu
      6.478247062559543
      G+C Difference (%)
      16.310000000000002
      0 references
      Methanococcus aeolicus
      16S Identity %
      75.17053206002728
      POCPu
      6.352459016393443
      G+C Difference (%)
      17.6
      0 references
      CAZyme
      GH28
      Occurance
      1
      0 references
      GH13
      Occurance
      1
      0 references
      GH105
      Occurance
      1
      0 references
      GH19
      Occurance
      2
      0 references
      GT66
      Occurance
      1
      0 references
      GT7
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT4
      Occurance
      7
      0 references
      GT2
      Occurance
      5
      0 references
      GT20
      Occurance
      1
      0 references
      CBM50
      Occurance
      4
      0 references
      CBM48
      Occurance
      1
      0 references
      CBM5
      Occurance
      2
      0 references
      Pathway
       
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