GCA_000333815.1 (Q44468): Difference between revisions
Added qualifier: POCPu (P4): 33.674252109434924 |
Added qualifier: Relative abundance (%) (P19): 0 |
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| Property / Comparison to close relatives: Granulimonas faecalis / qualifier | |||||||
ANI %: 78.4879
| |||||||
| Property / Comparison to close relatives: Granulimonas faecalis / qualifier | |||||||
G+C Difference (%): 3.319999999999993
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Eggerthella lenta / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Eggerthella lenta / qualifier | |||||||
16S Identity %: 25.718015665796344
| |||||||
| Property / Comparison to close relatives: Eggerthella lenta / qualifier | |||||||
POCPu: 20.713305898491083
| |||||||
| Property / Comparison to close relatives: Eggerthella lenta / qualifier | |||||||
G+C Difference (%): 1.6099999999999994
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Eggerthella guodeyinii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Eggerthella guodeyinii / qualifier | |||||||
16S Identity %: 25.718015665796344
| |||||||
| Property / Comparison to close relatives: Eggerthella guodeyinii / qualifier | |||||||
POCPu: 19.635036496350363
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| Property / Comparison to close relatives: Eggerthella guodeyinii / qualifier | |||||||
ANI %: 77.4803
| |||||||
| Property / Comparison to close relatives: Eggerthella guodeyinii / qualifier | |||||||
G+C Difference (%): 0.3499999999999943
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Eggerthella timonensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Eggerthella timonensis / qualifier | |||||||
16S Identity %: 25.663129973474803
| |||||||
| Property / Comparison to close relatives: Eggerthella timonensis / qualifier | |||||||
POCPu: 20.10562052055828
| |||||||
| Property / Comparison to close relatives: Eggerthella timonensis / qualifier | |||||||
ANI %: 77.7363
| |||||||
| Property / Comparison to close relatives: Eggerthella timonensis / qualifier | |||||||
G+C Difference (%): 0.6400000000000006
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Olsenella massiliensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Olsenella massiliensis / qualifier | |||||||
16S Identity %: 25.651302605210418
| |||||||
| Property / Comparison to close relatives: Olsenella massiliensis / qualifier | |||||||
POCPu: 33.60448807854137
| |||||||
| Property / Comparison to close relatives: Olsenella massiliensis / qualifier | |||||||
ANI %: 77.9301
| |||||||
| Property / Comparison to close relatives: Olsenella massiliensis / qualifier | |||||||
G+C Difference (%): 0.4200000000000017
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Collinsella tanakaei / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Collinsella tanakaei / qualifier | |||||||
16S Identity %: 25.630810092961486
| |||||||
| Property / Comparison to close relatives: Collinsella tanakaei / qualifier | |||||||
POCPu: 48.76409887209023
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| Property / Comparison to close relatives: Collinsella tanakaei / qualifier | |||||||
ANI %: 79.3658
| |||||||
| Property / Comparison to close relatives: Collinsella tanakaei / qualifier | |||||||
G+C Difference (%): 5.810000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Adlercreutzia muris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Adlercreutzia muris / qualifier | |||||||
16S Identity %: 25.48611111111111
| |||||||
| Property / Comparison to close relatives: Adlercreutzia muris / qualifier | |||||||
POCPu: 22.340425531914892
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| Property / Comparison to close relatives: Adlercreutzia muris / qualifier | |||||||
G+C Difference (%): 0.730000000000004
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Senegalimassilia anaerobia / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Senegalimassilia anaerobia / qualifier | |||||||
16S Identity %: 25.471698113207548
| |||||||
| Property / Comparison to close relatives: Senegalimassilia anaerobia / qualifier | |||||||
POCPu: 24.71308339709258
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| Property / Comparison to close relatives: Senegalimassilia anaerobia / qualifier | |||||||
G+C Difference (%): 4.880000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Paraeggerthella hongkongensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Paraeggerthella hongkongensis / qualifier | |||||||
16S Identity %: 25.46075085324232
| |||||||
| Property / Comparison to close relatives: Paraeggerthella hongkongensis / qualifier | |||||||
POCPu: 21.68232867293147
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| Property / Comparison to close relatives: Paraeggerthella hongkongensis / qualifier | |||||||
G+C Difference (%): 4.920000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Collinsella stercoris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Collinsella stercoris / qualifier | |||||||
16S Identity %: 25.45691906005222
| |||||||
| Property / Comparison to close relatives: Collinsella stercoris / qualifier | |||||||
POCPu: 48.33994053518335
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| Property / Comparison to close relatives: Collinsella stercoris / qualifier | |||||||
ANI %: 80.3339
| |||||||
| Property / Comparison to close relatives: Collinsella stercoris / qualifier | |||||||
G+C Difference (%): 2.460000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Collinsella intestinalis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Collinsella intestinalis / qualifier | |||||||
16S Identity %: 25.45691906005222
| |||||||
| Property / Comparison to close relatives: Collinsella intestinalis / qualifier | |||||||
POCPu: 49.44930810505507
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| Property / Comparison to close relatives: Collinsella intestinalis / qualifier | |||||||
ANI %: 79.7382
| |||||||
| Property / Comparison to close relatives: Collinsella intestinalis / qualifier | |||||||
G+C Difference (%): 3.520000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Olsenella porci / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Olsenella porci / qualifier | |||||||
16S Identity %: 25.31815137307435
| |||||||
| Property / Comparison to close relatives: Olsenella porci / qualifier | |||||||
POCPu: 34.8090058183658
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| Property / Comparison to close relatives: Olsenella porci / qualifier | |||||||
ANI %: 77.973
| |||||||
| Property / Comparison to close relatives: Olsenella porci / qualifier | |||||||
G+C Difference (%): 0.9399999999999977
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Senegalimassilia faecalis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Senegalimassilia faecalis / qualifier | |||||||
16S Identity %: 25.23680649526387
| |||||||
| Property / Comparison to close relatives: Senegalimassilia faecalis / qualifier | |||||||
POCPu: 23.145539906103284
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| Property / Comparison to close relatives: Senegalimassilia faecalis / qualifier | |||||||
G+C Difference (%): 4.630000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Olsenella uli / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Olsenella uli / qualifier | |||||||
16S Identity %: 25.06527415143603
| |||||||
| Property / Comparison to close relatives: Olsenella uli / qualifier | |||||||
POCPu: 34.104199893673574
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| Property / Comparison to close relatives: Olsenella uli / qualifier | |||||||
ANI %: 78.1425
| |||||||
| Property / Comparison to close relatives: Olsenella uli / qualifier | |||||||
G+C Difference (%): 1.1099999999999994
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Cryptobacterium curtum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Cryptobacterium curtum / qualifier | |||||||
16S Identity %: 25
| |||||||
| Property / Comparison to close relatives: Cryptobacterium curtum / qualifier | |||||||
POCPu: 21.079308288610616
| |||||||
| Property / Comparison to close relatives: Cryptobacterium curtum / qualifier | |||||||
G+C Difference (%): 14.900000000000006
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Slackia equolifaciens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Slackia equolifaciens / qualifier | |||||||
16S Identity %: 24.9667994687915
| |||||||
| Property / Comparison to close relatives: Slackia equolifaciens / qualifier | |||||||
POCPu: 26.22169249106079
| |||||||
| Property / Comparison to close relatives: Slackia equolifaciens / qualifier | |||||||
G+C Difference (%): 6
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Berryella intestinalis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Berryella intestinalis / qualifier | |||||||
16S Identity %: 24.755244755244753
| |||||||
| Property / Comparison to close relatives: Berryella intestinalis / qualifier | |||||||
POCPu: 22.610595303113055
| |||||||
| Property / Comparison to close relatives: Berryella intestinalis / qualifier | |||||||
G+C Difference (%): 2.25
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Adlercreutzia caecimuris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Adlercreutzia caecimuris / qualifier | |||||||
16S Identity %: 24.701195219123505
| |||||||
| Property / Comparison to close relatives: Adlercreutzia caecimuris / qualifier | |||||||
POCPu: 21.011058451816748
| |||||||
| Property / Comparison to close relatives: Adlercreutzia caecimuris / qualifier | |||||||
G+C Difference (%): 1.9500000000000028
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermophilibacter provencensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermophilibacter provencensis / qualifier | |||||||
16S Identity %: 24.684804246848042
| |||||||
| Property / Comparison to close relatives: Thermophilibacter provencensis / qualifier | |||||||
POCPu: 39.26665119517289
| |||||||
| Property / Comparison to close relatives: Thermophilibacter provencensis / qualifier | |||||||
ANI %: 79.4604
| |||||||
| Property / Comparison to close relatives: Thermophilibacter provencensis / qualifier | |||||||
G+C Difference (%): 1.5999999999999943
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Xiamenia xianingshaonis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Xiamenia xianingshaonis / qualifier | |||||||
16S Identity %: 24.585818422796553
| |||||||
| Property / Comparison to close relatives: Xiamenia xianingshaonis / qualifier | |||||||
POCPu: 23.563218390804597
| |||||||
| Property / Comparison to close relatives: Xiamenia xianingshaonis / qualifier | |||||||
G+C Difference (%): 2.510000000000005
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Slackia faecicanis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Slackia faecicanis / qualifier | |||||||
16S Identity %: 24.46949602122016
| |||||||
| Property / Comparison to close relatives: Slackia faecicanis / qualifier | |||||||
POCPu: 25.968357883251503
| |||||||
| Property / Comparison to close relatives: Slackia faecicanis / qualifier | |||||||
G+C Difference (%): 2.8599999999999994
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Slackia isoflavoniconvertens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Slackia isoflavoniconvertens / qualifier | |||||||
16S Identity %: 24.369189907038514
| |||||||
| Property / Comparison to close relatives: Slackia isoflavoniconvertens / qualifier | |||||||
POCPu: 24.488739321770645
| |||||||
| Property / Comparison to close relatives: Slackia isoflavoniconvertens / qualifier | |||||||
G+C Difference (%): 8.14
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Slackia piriformis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Slackia piriformis / qualifier | |||||||
16S Identity %: 23.306772908366533
| |||||||
| Property / Comparison to close relatives: Slackia piriformis / qualifier | |||||||
POCPu: 25.46895640686922
| |||||||
| Property / Comparison to close relatives: Slackia piriformis / qualifier | |||||||
G+C Difference (%): 8.64
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Paratractidigestivibacter faecalis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Paratractidigestivibacter faecalis / qualifier | |||||||
POCPu: 37.411764705882355
| |||||||
| Property / Comparison to close relatives: Paratractidigestivibacter faecalis / qualifier | |||||||
ANI %: 78.8454
| |||||||
| Property / Comparison to close relatives: Paratractidigestivibacter faecalis / qualifier | |||||||
G+C Difference (%): 0.3100000000000023
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Adlercreutzia equolifaciens / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Adlercreutzia equolifaciens / qualifier | |||||||
POCPu: 21.992966002344666
| |||||||
| Property / Comparison to close relatives: Adlercreutzia equolifaciens / qualifier | |||||||
G+C Difference (%): 2.3500000000000014
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Parvibacter caecicola / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Parvibacter caecicola / qualifier | |||||||
POCPu: 21.906693711967545
| |||||||
| Property / Comparison to close relatives: Parvibacter caecicola / qualifier | |||||||
G+C Difference (%): 3.3400000000000034
| |||||||
| Property / Carbon source | |||||||
| Property / Carbon source: cellobiose / rank | |||||||
Normal rank | |||||||
| Property / Carbon source | |||||||
| Property / Carbon source: starch / rank | |||||||
Normal rank | |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH73 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH73 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 12
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH77 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH77 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH6 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH16 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH16 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH2 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH3 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH3 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH78 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH78 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH36 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH36 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH35 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH35 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH43 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH43 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH79 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH79 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH1 / qualifier | |||||||
Occurance: 6
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH4 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH49 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH49 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH71 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH71 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH5 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH19 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 25
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT13 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT35 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT35 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT5 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 9
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT28 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT8 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT8 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT20 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT20 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT26 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT26 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE9 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE9 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE4 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 5
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM48 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM48 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM2 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM5 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM5 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Proline biosynthesis, glutamate => proline / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Proline biosynthesis, glutamate => proline / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Tyrosine biosynthesis, chorismate => arogenate => tyrosine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Triacylglycerol biosynthesis / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Triacylglycerol biosynthesis / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glutathione biosynthesis, glutamate => glutathione / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glutathione biosynthesis, glutamate => glutathione / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha / rank | |||||||
Normal rank | |||||||
| Property / Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Thiamine salvage pathway, HMP/HET => TMP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Thiamine salvage pathway, HMP/HET => TMP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank | |||||||
Normal rank | |||||||
| Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc / rank | |||||||
Normal rank | |||||||
| Property / Pathway: UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycogen degradation, glycogen => glucose-6P / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycogen degradation, glycogen => glucose-6P / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glycogen biosynthesis, glucose-1P => glycogen/starch / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Fatty acid biosynthesis, elongation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Fatty acid biosynthesis, elongation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Melibiose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Melibiose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Fructose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Fructose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Mannose degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Mannose degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Galacturonate degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Galacturonate degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Aspartate degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Aspartate degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Alanine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Alanine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Cysteine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Cysteine degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Glutamine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Glutamine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Serine degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Serine degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Threonine degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Threonine degradation I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Threonine degradation II / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Threonine degradation II / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arginine degradation V / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arginine degradation V / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Bifidobacterium shunt / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Bifidobacterium shunt / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyruvate:formate lyase / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyruvate:formate lyase / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactaldehyde degradation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactaldehyde degradation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Acetyl-CoA to acetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Acetyl-CoA to acetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Ethanol production I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Ethanol production I / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Lactate production / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Lactate production / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0.5
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 2.6
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0.01
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 22.8
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0.13
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0.1
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 1.8
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 2.1
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0.9
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
Latest revision as of 09:24, 16 July 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_000333815.1 |
genome assembly |
Statements
no current description - please contribute here
0 references
28.073916133617626
23.02096705177578
77.457
0.6700000000000017
0 references
27.511490479317136
48.63671773565308
79.1957
6.010000000000005
0 references
27.320954907161806
40.24096385542168
79.3673
0.4200000000000017
0 references
27.224435590969453
38.43115124153499
79.1574
0.21000000000000796
0 references
27.00729927007299
22.39454094292804
77.8596
0.519999999999996
0 references
26.856763925729442
46.9807391983342
80.0276
1.8200000000000003
0 references
26.790450928381965
52.47122545700744
81.0708
1.6800000000000068
0 references
26.779882429784458
44.069583552978386
77.5595
5.420000000000002
0 references
0 references
26.449033977348435
64.77680861980502
82.2578
4.310000000000002
0 references
0 references
0 references
26.211015262110156
30.721003134796238
78.4059
0.4300000000000068
0 references
0 references
0 references
25.974884335756776
22.677824267782427
78.0272
0.28999999999999204
0 references
0 references
0 references
25.81721147431621
34.308705193855154
78.0186
3.4000000000000057
0 references
25.77922077922078
33.674252109434924
78.4879
3.319999999999993
0 references
0 references
25.718015665796344
19.635036496350363
77.4803
0.3499999999999943
0 references
25.663129973474803
20.10562052055828
77.7363
0.6400000000000006
0 references
25.651302605210418
33.60448807854137
77.9301
0.4200000000000017
0 references
25.630810092961486
48.76409887209023
79.3658
5.810000000000002
0 references
0 references
0 references
0 references
25.45691906005222
48.33994053518335
80.3339
2.460000000000001
0 references
25.45691906005222
49.44930810505507
79.7382
3.520000000000003
0 references
25.31815137307435
34.8090058183658
77.973
0.9399999999999977
0 references
0 references
25.06527415143603
34.104199893673574
78.1425
1.1099999999999994
0 references
0 references
0 references
0 references
0 references
24.684804246848042
39.26665119517289
79.4604
1.5999999999999943
0 references
0 references
0 references
0 references
0 references
0 references
21.992966002344666
2.3500000000000014
0 references
0 references
0 references
0 references
0 references
0 references
0 references