GCA_000309075.1 (Q44424): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 85.03118503118503 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (178 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Tistrella mobilis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Tistrella mobilis / qualifier | |||||||
16S Identity %: 84.99308437067774
| |||||||
| Property / Comparison to close relatives: Tistrella mobilis / qualifier | |||||||
POCPu: 5.757666867107637
| |||||||
| Property / Comparison to close relatives: Tistrella mobilis / qualifier | |||||||
G+C Difference (%): 39.28
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Cucumibacter marinus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Cucumibacter marinus / qualifier | |||||||
16S Identity %: 84.95212038303693
| |||||||
| Property / Comparison to close relatives: Cucumibacter marinus / qualifier | |||||||
POCPu: 6.284772305790233
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| Property / Comparison to close relatives: Cucumibacter marinus / qualifier | |||||||
G+C Difference (%): 33.16
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Chelativorans intermedius / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Chelativorans intermedius / qualifier | |||||||
16S Identity %: 84.94915254237289
| |||||||
| Property / Comparison to close relatives: Chelativorans intermedius / qualifier | |||||||
POCPu: 6.172140430351076
| |||||||
| Property / Comparison to close relatives: Chelativorans intermedius / qualifier | |||||||
G+C Difference (%): 36.620000000000005
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ehrlichia ruminantium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ehrlichia ruminantium / qualifier | |||||||
16S Identity %: 84.79571332886805
| |||||||
| Property / Comparison to close relatives: Ehrlichia ruminantium / qualifier | |||||||
POCPu: 15.493581230633025
| |||||||
| Property / Comparison to close relatives: Ehrlichia ruminantium / qualifier | |||||||
G+C Difference (%): 1.5700000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Devosia psychrophila / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Devosia psychrophila / qualifier | |||||||
16S Identity %: 84.78260869565217
| |||||||
| Property / Comparison to close relatives: Devosia psychrophila / qualifier | |||||||
POCPu: 5.2236198462613554
| |||||||
| Property / Comparison to close relatives: Devosia psychrophila / qualifier | |||||||
G+C Difference (%): 32.05
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ehrlichia muris subsp. muris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ehrlichia muris subsp. muris / qualifier | |||||||
16S Identity %: 84.77531857813548
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ehrlichia chaffeensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ehrlichia chaffeensis / qualifier | |||||||
16S Identity %: 84.66175485599464
| |||||||
| Property / Comparison to close relatives: Ehrlichia chaffeensis / qualifier | |||||||
POCPu: 15.087561742254154
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| Property / Comparison to close relatives: Ehrlichia chaffeensis / qualifier | |||||||
G+C Difference (%): 1.0500000000000007
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Tistrella bauzanensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Tistrella bauzanensis / qualifier | |||||||
16S Identity %: 84.65679676985195
| |||||||
| Property / Comparison to close relatives: Tistrella bauzanensis / qualifier | |||||||
POCPu: 5.6262769134056265
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| Property / Comparison to close relatives: Tistrella bauzanensis / qualifier | |||||||
G+C Difference (%): 38.03
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Emcibacter nanhaiensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Emcibacter nanhaiensis / qualifier | |||||||
16S Identity %: 84.44139821795751
| |||||||
| Property / Comparison to close relatives: Emcibacter nanhaiensis / qualifier | |||||||
POCPu: 7.906688687035508
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| Property / Comparison to close relatives: Emcibacter nanhaiensis / qualifier | |||||||
G+C Difference (%): 27.179999999999996
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Magnetovibrio blakemorei / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Magnetovibrio blakemorei / qualifier | |||||||
16S Identity %: 84.28475486903963
| |||||||
| Property / Comparison to close relatives: Magnetovibrio blakemorei / qualifier | |||||||
POCPu: 7.286276133305734
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| Property / Comparison to close relatives: Magnetovibrio blakemorei / qualifier | |||||||
G+C Difference (%): 25.24
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Kordiimonas lipolytica / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Kordiimonas lipolytica / qualifier | |||||||
16S Identity %: 84.08631153068106
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Pseudemcibacter aquimaris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Pseudemcibacter aquimaris / qualifier | |||||||
16S Identity %: 84.03755868544602
| |||||||
| Property / Comparison to close relatives: Pseudemcibacter aquimaris / qualifier | |||||||
POCPu: 8.182640144665461
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| Property / Comparison to close relatives: Pseudemcibacter aquimaris / qualifier | |||||||
G+C Difference (%): 13.7
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Kordiimonas marina / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Kordiimonas marina / qualifier | |||||||
16S Identity %: 84.0301576422207
| |||||||
| Property / Comparison to close relatives: Kordiimonas marina / qualifier | |||||||
POCPu: 7.82590051457976
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| Property / Comparison to close relatives: Kordiimonas marina / qualifier | |||||||
G+C Difference (%): 30.88
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Rickettsia tamurae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Rickettsia tamurae / qualifier | |||||||
POCPu: 33.969986357435204
| |||||||
| Property / Comparison to close relatives: Rickettsia tamurae / qualifier | |||||||
G+C Difference (%): 3.419999999999998
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Rickettsia conorii / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Rickettsia conorii / qualifier | |||||||
POCPu: 29.348837209302324
| |||||||
| Property / Comparison to close relatives: Rickettsia conorii / qualifier | |||||||
G+C Difference (%): 2.789999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Ehrlichia muris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Ehrlichia muris / qualifier | |||||||
POCPu: 15.336322869955158
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| Property / Comparison to close relatives: Ehrlichia muris / qualifier | |||||||
G+C Difference (%): 0.6099999999999994
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 5
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH6 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH6 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH65 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH65 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH28 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH23 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH23 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH25 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH25 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT32 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT32 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 7
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 7
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT28 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT28 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT30 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT30 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT19 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE11 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE11 / qualifier | |||||||
Occurance: 3
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM20 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM20 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM47 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM47 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM48 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM48 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Succinate dehydrogenase, prokaryotes / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Succinate dehydrogenase, prokaryotes / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Cytochrome bc1 complex respiratory unit / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Cytochrome bc1 complex respiratory unit / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: CAM (Crassulacean acid metabolism), light / rank | |||||||
Normal rank | |||||||
| Property / Pathway: CAM (Crassulacean acid metabolism), light / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha / rank | |||||||
Normal rank | |||||||
| Property / Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Fatty acid biosynthesis, elongation / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Fatty acid biosynthesis, elongation / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Aspartate degradation I / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Aspartate degradation I / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 08:17, 16 July 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_000309075.1 |
genome assembly |
Statements
no current description - please contribute here
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