Jump to content

GCA_000299095.1 (Q44389): Difference between revisions

Add links
From wikibase
← Older edit
Admin (talk | contribs)
Bots, Bureaucrats, Interface administrators, Administrators
1,124,913 edits
 
(94 intermediate revisions by the same user not shown)
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: Glycine cleavage system / rank
 
Normal rank
Property / Pathway: Glycine cleavage system / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / rank
 
Normal rank
Property / Pathway: GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc / qualifier
 
Property / Pathway
 
Property / Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin / rank
 
Normal rank
Property / Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate / rank
 
Normal rank
Property / Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate / qualifier
 
Property / Pathway
 
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank
 
Normal rank
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier
 
Property / Pathway
 
Property / Pathway: Fatty acid biosynthesis, elongation / rank
 
Normal rank
Property / Pathway: Fatty acid biosynthesis, elongation / qualifier
 
Property / Pathway
 
Property / Pathway: C1-unit interconversion, prokaryotes / rank
 
Normal rank
Property / Pathway: C1-unit interconversion, prokaryotes / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Alanine degradation II / rank
 
Normal rank
Property / Pathway: Alanine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Glycine degradation / rank
 
Normal rank
Property / Pathway: Glycine degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine degradation II / rank
 
Normal rank
Property / Pathway: Cysteine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamine degradation II / rank
 
Normal rank
Property / Pathway: Glutamine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Glycerol degradation II / rank
 
Normal rank
Property / Pathway: Glycerol degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Succinate production / rank
 
Normal rank
Property / Pathway: Succinate production / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0.6
Amount0.6
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0.48
Amount0.48
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 2.5
Amount2.5
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.04
Amount0.04
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 51
Amount51
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 1.66
Amount1.66
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0.9
Amount0.9
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 58.5
Amount58.5
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 6.38
Amount6.38
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.7
Amount0.7
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.05
Amount0.05
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.8
Amount0.8
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.1
Amount0.1
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.7
Amount0.7
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 6.6
Amount6.6
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.24
Amount0.24
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 2.1
Amount2.1
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 8.6
Amount8.6
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 1.61
Amount1.61
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.04
Amount0.04
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 07:20, 16 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_000299095.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Neorhizobium tomejilense
      16S Identity %
      27.656675749318797
      POCPu
      6.935817805383023
      G+C Difference (%)
      32.82000000000001
      0 references
      Mesorhizobium atlanticum
      16S Identity %
      27.63784887678693
      POCPu
      7.4935064935064934
      G+C Difference (%)
      35.099999999999994
      0 references
      Mesorhizobium comanense
      16S Identity %
      27.55102040816326
      POCPu
      7.137715930902111
      G+C Difference (%)
      34.900000000000006
      0 references
      Endobacterium cereale
      16S Identity %
      27.501701837985028
      POCPu
      7.00870985302123
      G+C Difference (%)
      30.140000000000004
      0 references
      Mesorhizobium wenxiniae
      16S Identity %
      27.27891156462585
      POCPu
      7.510971786833856
      G+C Difference (%)
      33.25
      0 references
      Ensifer canadensis
      16S Identity %
      27.2108843537415
      POCPu
      6.196627983358879
      G+C Difference (%)
      32.33
      0 references
      Phyllobacterium calauticae
      16S Identity %
      27.142857142857142
      POCPu
      8.481051344743276
      G+C Difference (%)
      30.48
      0 references
      Mesorhizobium tianshanense
      16S Identity %
      25.799863852961195
      POCPu
      6.753909282466452
      G+C Difference (%)
      33.489999999999995
      0 references
      Shinella zoogloeoides
      16S Identity %
      25.775327360441075
      POCPu
      8.543625268019133
      G+C Difference (%)
      35.80000000000001
      0 references
      Mesorhizobium chacoense
      16S Identity %
      25.77107607950651
      0 references
      Tistrella bauzanensis
      16S Identity %
      25.681198910081743
      POCPu
      7.6887590342918655
      G+C Difference (%)
      38.45
      0 references
      Mesorhizobium loti
      16S Identity %
      25.594405594405593
      POCPu
      6.704427233845799
      G+C Difference (%)
      33.72
      0 references
      Mesorhizobium norvegicum
      16S Identity %
      25.57980900409277
      POCPu
      6.489896289960441
      G+C Difference (%)
      33.78
      0 references
      Mesorhizobium neociceri
      16S Identity %
      25.56701030927835
      POCPu
      6.89900426742532
      G+C Difference (%)
      33.739999999999995
      0 references
      Mesorhizobium muleiense
      16S Identity %
      25.562372188139058
      POCPu
      7.5125628140703515
      G+C Difference (%)
      33.629999999999995
      0 references
      Mesorhizobium amorphae
      16S Identity %
      25.51159618008186
      POCPu
      7.212713936430318
      G+C Difference (%)
      34.239999999999995
      0 references
      Aminobacter aminovorans
      16S Identity %
      25.495557074504443
      POCPu
      8.116883116883116
      G+C Difference (%)
      34.56
      0 references
      Hoeflea anabaenae
      16S Identity %
      25.454545454545453
      0 references
      Brucella grignonensis
      16S Identity %
      25.443383356070942
      POCPu
      8.757297748123436
      G+C Difference (%)
      25.52
      0 references
      Mesorhizobium tamadayense
      16S Identity %
      25.443383356070942
      POCPu
      6.959030582804386
      G+C Difference (%)
      34.540000000000006
      0 references
      Rhizobium favelukesii
      16S Identity %
      25.42955326460481
      POCPu
      6.216364634816035
      G+C Difference (%)
      31.02
      0 references
      Mesorhizobium erdmanii
      16S Identity %
      25.37414965986395
      POCPu
      7.200197604050882
      G+C Difference (%)
      33.980000000000004
      0 references
      Aminobacter niigataensis
      16S Identity %
      25.291295407813568
      POCPu
      8.618059792556437
      G+C Difference (%)
      34.769999999999996
      0 references
      Rhizobium lentis
      16S Identity %
      25.290498974709504
      POCPu
      7.258382642998027
      G+C Difference (%)
      32.56
      0 references
      Aminobacter aganoensis
      16S Identity %
      25.273972602739725
      POCPu
      8.352435530085959
      G+C Difference (%)
      35.260000000000005
      0 references
      Mesorhizobium jarvisii
      16S Identity %
      25.272479564032697
      POCPu
      7.193605683836591
      G+C Difference (%)
      34.57000000000001
      0 references
      Rhizobium rhizogenes
      16S Identity %
      25.256673511293638
      POCPu
      6.918081918081918
      G+C Difference (%)
      31.279999999999998
      0 references
      Rhizobium lusitanum
      16S Identity %
      25.25597269624573
      POCPu
      6.179712726867832
      G+C Difference (%)
      31.000000000000004
      0 references
      Pararhizobium giardinii
      16S Identity %
      25.238095238095237
      0 references
      Rhizobium dioscoreae
      16S Identity %
      25.221540558963873
      POCPu
      6.896551724137931
      G+C Difference (%)
      31.02
      0 references
      Rhizobium pisi
      16S Identity %
      25.221540558963873
      POCPu
      7.011070110701106
      G+C Difference (%)
      32.349999999999994
      0 references
      Ensifer alkalisoli
      16S Identity %
      25.221540558963873
      0 references
      Pseudohoeflea suaedae
      16S Identity %
      25.155925155925157
      POCPu
      10.814094775212636
      G+C Difference (%)
      33.91
      0 references
      Rhizobium anhuiense
      16S Identity %
      25.153793574846205
      POCPu
      6.8179016150906175
      G+C Difference (%)
      32.5
      0 references
      Rhizobium ruizarguesonis
      16S Identity %
      25.153793574846205
      POCPu
      6.074713296241626
      G+C Difference (%)
      32.120000000000005
      0 references
      Rhizobium laguerreae
      16S Identity %
      25.0852079072938
      POCPu
      6.422878574777309
      G+C Difference (%)
      32.150000000000006
      0 references
      Rhizobium leguminosarum
      16S Identity %
      25.0852079072938
      POCPu
      6.134206958879349
      G+C Difference (%)
      31.95
      0 references
      Shinella lacus
      16S Identity %
      24.880708929788682
      POCPu
      7.196364976053052
      G+C Difference (%)
      34.980000000000004
      0 references
      Rhizobium etli
      16S Identity %
      24.880382775119617
      POCPu
      7.001561686621552
      G+C Difference (%)
      32.400000000000006
      0 references
      Rhizobium metallidurans
      16S Identity %
      24.84641638225256
      POCPu
      7.885642475651901
      G+C Difference (%)
      33.67
      0 references
      Rhizobium beringeri
      16S Identity %
      24.7612551159618
      POCPu
      6.225501498731843
      G+C Difference (%)
      32.14
      0 references
      Mesorhizobium alhagi
      16S Identity %
      24.74437627811861
      POCPu
      7.124804428932483
      G+C Difference (%)
      34.019999999999996
      0 references
      Brucella oryzae
      16S Identity %
      24.693877551020407
      POCPu
      7.84225352112676
      G+C Difference (%)
      27.48
      0 references
      Rhizobium johnstonii
      16S Identity %
      24.69304229195089
      0 references
      Rhizobium brockwellii
      16S Identity %
      24.69304229195089
      POCPu
      6.660137120470128
      G+C Difference (%)
      32.25
      0 references
      Oricola indica
      16S Identity %
      24.438393464942138
      POCPu
      8.955223880597014
      G+C Difference (%)
      33.46000000000001
      0 references
      Ferirhizobium litorale
      16S Identity %
      24.438393464942138
      POCPu
      8.162622124172707
      G+C Difference (%)
      32.870000000000005
      0 references
      Bartonella apis
      16S Identity %
      24.23417290673928
      POCPu
      11.506622516556291
      G+C Difference (%)
      16.820000000000004
      0 references
      Rhizobium aethiopicum
      16S Identity %
      23.581681476418318
      POCPu
      6.991912340203496
      G+C Difference (%)
      32.44
      0 references
      Paenochrobactrum glaciei
      16S Identity %
      23.537414965986393
      POCPu
      9.732161112246985
      G+C Difference (%)
      20.37
      0 references
      Rhizobium giardinii
      POCPu
      7.201516108654453
      G+C Difference (%)
      32.03
      0 references
      Sinorhizobium alkalisoli
      POCPu
      8.04629758750523
      G+C Difference (%)
      33.61
      0 references
      CAZyme
      GH13
      Occurance
      2
      0 references
      GH23
      Occurance
      3
      0 references
      GH65
      Occurance
      1
      0 references
      GH28
      Occurance
      1
      0 references
      GH73
      Occurance
      1
      0 references
      GH0
      Occurance
      2
      0 references
      GH103
      Occurance
      1
      0 references
      GH16
      Occurance
      1
      0 references
      GH3
      Occurance
      1
      0 references
      GT13
      Occurance
      2
      0 references
      GT51
      Occurance
      2
      0 references
      GT4
      Occurance
      14
      0 references
      GT41
      Occurance
      1
      0 references
      GT1
      Occurance
      3
      0 references
      GT28
      Occurance
      4
      0 references
      GT83
      Occurance
      1
      0 references
      GT2
      Occurance
      15
      0 references
      GT21
      Occurance
      1
      0 references
      GT19
      Occurance
      1
      0 references
      GT0
      Occurance
      1
      0 references
      GT9
      Occurance
      2
      0 references
      GT17
      Occurance
      2
      0 references
      GT30
      Occurance
      2
      0 references
      CE11
      Occurance
      2
      0 references
      CE12
      Occurance
      1
      0 references
      CBM13
      Occurance
      2
      0 references
      CBM50
      Occurance
      2
      0 references
      CBM20
      Occurance
      1
      0 references
      CBM6
      Occurance
      1
      0 references
      CBM48
      Occurance
      1
      0 references
      Pathway
      Ecosystem
      MAGs
      no MAG matches found
      0 references
       
      Retrieved from "https://taxakg.zbmed.de/w/index.php?title=Item:Q44389&oldid=102742"