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‎Added qualifier: Prevalence (%) (P18): 0.5
‎Added qualifier: Ecosystem (P27): Generic (Q43559)
 
(36 intermediate revisions by the same user not shown)
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.13
Amount0.13
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.09
Amount0.09
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 6.6
Amount6.6
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.17
Amount0.17
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: 3300000148_7.fna / rank
 
Normal rank
Property / MAGs: 3300000148_7.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300000238_6.fna / rank
 
Normal rank
Property / MAGs: 3300000238_6.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300025668_41.fna / rank
 
Normal rank
Property / MAGs: 3300025668_41.fna / qualifier
 

Latest revision as of 01:45, 16 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_000205985.2
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Sedimenticola hydrogenitrophicus
      16S Identity %
      30.403645833333332
      POCPu
      18.28310502283105
      G+C Difference (%)
      21.46
      0 references
      Pseudomonas rustica
      16S Identity %
      27.77053455019557
      POCPu
      11.051132103763683
      G+C Difference (%)
      19.65
      0 references
      Marimicrobium arenosum
      16S Identity %
      26.561472715318867
      0 references
      Neptunomonas qingdaonensis
      16S Identity %
      26.03896103896104
      POCPu
      14.942099364960775
      G+C Difference (%)
      6.950000000000003
      0 references
      Sedimenticola selenatireducens
      16S Identity %
      26.007802340702213
      POCPu
      17.98894633624532
      G+C Difference (%)
      17.35
      0 references
      Neptuniibacter victor
      16S Identity %
      26.007802340702213
      POCPu
      15.510286405808793
      G+C Difference (%)
      4.899999999999999
      0 references
      Pseudohongiella nitratireducens
      16S Identity %
      25.8777633289987
      POCPu
      14.292175486205336
      G+C Difference (%)
      12.520000000000003
      0 references
      Pseudomonas crudilactis
      16S Identity %
      25.684485006518905
      POCPu
      10.299186543499243
      G+C Difference (%)
      19.870000000000005
      0 references
      Spartinivicinus marinus
      16S Identity %
      25.682704811443436
      POCPu
      10.669708763924305
      G+C Difference (%)
      1.1499999999999986
      0 references
      Kangiella japonica
      16S Identity %
      25.570776255707763
      POCPu
      18.879955641807598
      G+C Difference (%)
      4.149999999999999
      0 references
      Pseudomonas khorasanensis
      16S Identity %
      25.554106910039113
      POCPu
      11.365059486537257
      G+C Difference (%)
      20.450000000000003
      0 references
      Pseudomonas benzenivorans
      16S Identity %
      25.49019607843137
      POCPu
      11.91463227391371
      G+C Difference (%)
      25.940000000000005
      0 references
      Kangiella koreensis
      16S Identity %
      25.45931758530184
      POCPu
      17.43807855891919
      G+C Difference (%)
      4.43
      0 references
      Pseudomonas tensinigenes
      16S Identity %
      25.423728813559322
      POCPu
      10.302273987798115
      G+C Difference (%)
      19.910000000000004
      0 references
      Pseudomonas pergaminensis
      16S Identity %
      25.407166123778502
      POCPu
      10.023310023310025
      G+C Difference (%)
      21.490000000000002
      0 references
      Pseudomonas salmasensis
      16S Identity %
      25.407166123778502
      POCPu
      10.743555356876769
      G+C Difference (%)
      21.03
      0 references
      Spongiibacter tropicus
      16S Identity %
      25.358539765319428
      POCPu
      14.158415841584157
      G+C Difference (%)
      18.020000000000003
      0 references
      Pseudomonas azadiae
      16S Identity %
      25.342019543973944
      POCPu
      10.859929078014185
      G+C Difference (%)
      21.43
      0 references
      Pseudomonas iranensis
      16S Identity %
      25.293350717079534
      POCPu
      10.935887988209284
      G+C Difference (%)
      20.630000000000003
      0 references
      Pseudomonas atacamensis
      16S Identity %
      25.293350717079534
      POCPu
      10.840902431878114
      G+C Difference (%)
      20.620000000000005
      0 references
      Aestuariirhabdus litorea
      16S Identity %
      25.26246719160105
      POCPu
      16.165890816758356
      G+C Difference (%)
      20.560000000000002
      0 references
      Pseudomonas gozinkensis
      16S Identity %
      25.228161668839633
      POCPu
      10.51745898190997
      G+C Difference (%)
      21.050000000000004
      0 references
      Saccharophagus degradans
      16S Identity %
      25.195822454308093
      POCPu
      12.849872773536896
      G+C Difference (%)
      6.57
      0 references
      Kangiella aquimarina
      16S Identity %
      25.19480519480519
      POCPu
      18.39080459770115
      G+C Difference (%)
      4.450000000000003
      0 references
      Pseudomonas fitomaticsae
      16S Identity %
      25.16297262059974
      POCPu
      10.466089868825007
      G+C Difference (%)
      21.330000000000005
      0 references
      Pseudomonas allokribbensis
      16S Identity %
      25.16297262059974
      POCPu
      10.132822127892647
      G+C Difference (%)
      21.080000000000005
      0 references
      Pseudomonas azerbaijanoccidentalis
      16S Identity %
      25.16297262059974
      POCPu
      9.801041527573776
      G+C Difference (%)
      20.04
      0 references
      Kangiella profundi
      16S Identity %
      25.064935064935064
      POCPu
      18.38989739542226
      G+C Difference (%)
      4.550000000000004
      0 references
      Thiorhodospira sibirica
      16S Identity %
      24.934725848563968
      POCPu
      17.377976892242394
      G+C Difference (%)
      17.370000000000005
      0 references
      Kangiella geojedonensis
      16S Identity %
      24.868766404199473
      POCPu
      18.376302797586398
      G+C Difference (%)
      4.520000000000003
      0 references
      Motiliproteus coralliicola
      16S Identity %
      24.772431729518857
      POCPu
      15.342785006797435
      G+C Difference (%)
      17.47
      0 references
      Neptunomonas acidivorans
      16S Identity %
      24.752475247524753
      0 references
      Maricurvus nonylphenolicus
      16S Identity %
      24.642392717815344
      0 references
      Alkalimarinus alittae
      16S Identity %
      24.57293035479632
      POCPu
      14.876828329484217
      G+C Difference (%)
      3.980000000000004
      0 references
      Alkalimarinus sediminis
      16S Identity %
      24.507227332457294
      POCPu
      15.122239747634069
      G+C Difference (%)
      4.910000000000004
      0 references
      Kangiella shandongensis
      16S Identity %
      24.48051948051948
      POCPu
      17.622027534418024
      G+C Difference (%)
      5.890000000000001
      0 references
      Thalassolituus oleivorans
      16S Identity %
      24.44733420026008
      POCPu
      13.982193443949816
      G+C Difference (%)
      7.3700000000000045
      0 references
      Alkalimarinus coralli
      16S Identity %
      24.44733420026008
      POCPu
      13.866947516236616
      G+C Difference (%)
      6.560000000000002
      0 references
      Oceaniserpentilla haliotis
      16S Identity %
      24.25227568270481
      0 references
      Pseudomonas moraviensis
      16S Identity %
      24.2503259452412
      POCPu
      11.102831594634873
      G+C Difference (%)
      20.910000000000004
      0 references
      Bermanella marisrubri
      16S Identity %
      23.9556135770235
      POCPu
      15.103270223752151
      G+C Difference (%)
      4.700000000000003
      0 references
      Pseudomonas lactis
      16S Identity %
      23.759791122715406
      POCPu
      9.710437710437711
      G+C Difference (%)
      20.760000000000005
      0 references
      Acidihalobacter aeolianus
      16S Identity %
      23.728813559322035
      POCPu
      16.40625
      G+C Difference (%)
      22.57
      0 references
      Kangiella sediminilitoris
      16S Identity %
      23.62204724409449
      POCPu
      19.079837618403246
      G+C Difference (%)
      4.140000000000001
      0 references
      Neptuniibacter caesariensis
      16S Identity %
      23.407022106631988
      POCPu
      14.681662984535047
      G+C Difference (%)
      6.760000000000005
      0 references
      Pseudomonas glycinae
      16S Identity %
      23.368146214099216
      POCPu
      10.626239727968263
      G+C Difference (%)
      21.22
      0 references
      Marinobacterium litorale
      16S Identity %
      23.342002600780233
      POCPu
      13.347802495930546
      G+C Difference (%)
      17.130000000000003
      0 references
      Marinobacterium aestuarii
      16S Identity %
      23.111979166666664
      POCPu
      12.599897976534603
      G+C Difference (%)
      19.53
      0 references
      Reinekea blandensis
      16S Identity %
      22.845953002610965
      POCPu
      11.809593023255815
      G+C Difference (%)
      12.850000000000001
      0 references
      Thiohalomonas nitratireducens
      16S Identity %
      22.046204620462046
      0 references
      CAZyme
      GH13
      Occurance
      2
      0 references
      GH6
      Occurance
      2
      0 references
      GH28
      Occurance
      1
      0 references
      GH23
      Occurance
      3
      0 references
      GH16
      Occurance
      1
      0 references
      GH3
      Occurance
      1
      0 references
      GH103
      Occurance
      3
      0 references
      GH0
      Occurance
      1
      0 references
      GH19
      Occurance
      1
      0 references
      GH43
      Occurance
      1
      0 references
      GH73
      Occurance
      1
      0 references
      GH114
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT4
      Occurance
      6
      0 references
      GT28
      Occurance
      3
      0 references
      GT2
      Occurance
      2
      0 references
      GT32
      Occurance
      1
      0 references
      GT30
      Occurance
      1
      0 references
      GT19
      Occurance
      1
      0 references
      GT51
      Occurance
      1
      0 references
      CE11
      Occurance
      1
      0 references
      CBM50
      Occurance
      5
      0 references
      CBM13
      Occurance
      3
      0 references
      CBM5
      Occurance
      1
      0 references
      CBM48
      Occurance
      1
      0 references
      Pathway
      Ecosystem
       
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