Jump to content

GCF_007826885.1 (Q343797): Difference between revisions

From wikibase
‎Changed an Item
‎Changed an Item
 
(2 intermediate revisions by the same user not shown)
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Threonine biosynthesis, aspartate => homoserine => threonine / rank
 
Normal rank
Property / Pathway: Threonine biosynthesis, aspartate => homoserine => threonine / qualifier
 
Property / Pathway
 
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank
 
Normal rank
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier
 
Property / Pathway
 
Property / Pathway: Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine / rank
 
Normal rank
Property / Pathway: Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: Acylglycerol degradation / rank
 
Normal rank
Property / Pathway: Acylglycerol degradation / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Polyamine biosynthesis, arginine => ornithine => putrescine / rank
 
Normal rank
Property / Pathway: Polyamine biosynthesis, arginine => ornithine => putrescine / qualifier
 
Property / Pathway
 
Property / Pathway: F420 biosynthesis, archaea / rank
 
Normal rank
Property / Pathway: F420 biosynthesis, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA / rank
 
Normal rank
Property / Pathway: Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank
 
Normal rank
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / rank
 
Normal rank
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 1
Amount1
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0.27
Amount0.27
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 8
Amount8
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 1.5
Amount1.5
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 2.1
Amount2.1
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 24.5
Amount24.5
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.07
Amount0.07
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 43.4
Amount43.4
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 4.48
Amount4.48
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 7.8
Amount7.8
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.2
Amount0.2
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 6.9
Amount6.9
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.12
Amount0.12
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 61.5
Amount61.5
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.34
Amount0.34
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 11.3
Amount11.3
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.14
Amount0.14
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 1.5
Amount1.5
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 1.4
Amount1.4
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 2.41
Amount2.41
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 02:24, 29 September 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCF_007826885.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      95.50408719346049
      29.763700351935647
      0 references
      86.23511904761905
      18.207797509695855
      0.1700000000000017
      0 references
      0 references
      86.10354223433242
      17.31886865555986
      0.5900000000000034
      0 references
      86.05166051660517
      19.089604264916957
      1.3299999999999983
      0 references
      85.90971272229822
      17.888910851947028
      0.09000000000000341
      0 references
      85.83106267029973
      18.34772370486656
      0.17999999999999972
      0 references
      0 references
      0 references
      81.69398907103826
      4.07358738501971
      0 references
      81.00137174211248
      1.7380509000620732
      12.509999999999998
      0 references
      80.46448087431693
      1.6569829997848073
      13.939999999999998
      0 references
      80.36935704514364
      1.8226500102396066
      0 references
      79.7153024911032
      1.5918011338857392
      22.729999999999997
      0 references
      79.46058091286307
      2.2335673261008293
      1.1000000000000014
      0 references
      79.28913192071086
      1.8810961449140733
      3.469999999999999
      0 references
      79.18956043956044
      1.6354208216992423
      0 references
      79.15512465373962
      1.7976166431024034
      1.6899999999999977
      0 references
      79.1095890410959
      2.1104201997361973
      2.710000000000001
      0 references
      79.08093278463649
      2.0144367970454926
      1.2100000000000009
      0 references
      79.0665751544269
      1.9839946648882962
      0 references
      79.01234567901234
      1.8473107732548635
      1.3599999999999994
      0 references
      79.00136798905609
      1.8994172242607381
      0 references
      78.96193771626298
      2.0031353422748652
      2.3200000000000003
      0 references
      78.94736842105263
      1.6029310739638196
      12.729999999999997
      0 references
      78.91854893908283
      1.6235993597072946
      0 references
      78.87901572112098
      1.8584420719652037
      19.909999999999997
      0 references
      78.87517146776406
      1.8483110261312936
      1.8400000000000034
      0 references
      78.8515406162465
      1.6975653339289705
      3.969999999999999
      0 references
      0 references
      78.34699453551912
      1.7398869073510224
      2.8400000000000034
      0 references
      78.22525597269625
      1.4306410720753349
      0 references
      78.20689655172414
      1.6147635524798154
      11.159999999999997
      0 references
      78.18057455540355
      1.5270708005552984
      0 references
      78.09719370294319
      1.5039281705948373
      0 references
      78.02047781569966
      2.16076058772688
      3.210000000000001
      0 references
      78.01724137931035
      1.8894578845135088
      0 references
      77.96123474515434
      1.8013960819635217
      22.520000000000003
      0 references
      77.94221282593375
      2.0434945631796024
      0 references
      77.82340862422998
      2.35191637630662
      1.7800000000000011
      0 references
      77.82340862422998
      2.2819701762313604
      0.38000000000000256
      0 references
      77.78537252221463
      2.1994134897360706
      1.7000000000000028
      0 references
      77.73109243697479
      1.6664272374658813
      0 references
      77.71701982228298
      2.2190553745928336
      1.5600000000000023
      0 references
      0 references
      77.59562841530054
      2.0294056740525988
      2.710000000000001
      0 references
      77.58865248226951
      1.6210937500000002
      15.079999999999998
      0 references
      77.58031442241969
      1.296967385084875
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references