Jump to content

GCA_039679445.1 (Q337605): Difference between revisions

Add links
From wikibase
← Older edit
Admin (talk | contribs)
Bots, Bureaucrats, Interface administrators, Administrators
5,472,969 edits
‎Changed an Item
‎Changed an Item
 
(2 intermediate revisions by the same user not shown)
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Proline biosynthesis, glutamate => proline / rank
 
Normal rank
Property / Pathway: Proline biosynthesis, glutamate => proline / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine / rank
 
Normal rank
Property / Pathway: Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / rank
 
Normal rank
Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA / rank
 
Normal rank
Property / Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / rank
 
Normal rank
Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate / rank
 
Normal rank
Property / Pathway: Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 1.9
Amount1.9
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.11
Amount0.11
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.7
Amount0.7
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.06
Amount0.06
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0.18
Amount0.18
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 10.5
Amount10.5
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.32
Amount0.32
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 3.5
Amount3.5
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.71
Amount0.71
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0.9
Amount0.9
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.08
Amount0.08
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 23:28, 28 September 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_039679445.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Methanobrevibacter olleyae
      16S Identity %
      84.00954653937947
      POCPu
      7.729994556341861
      G+C Difference (%)
      8.629999999999999
      0 references
      Methanobacterium lacus
      16S Identity %
      82.94862248696947
      POCPu
      9.282796187017702
      G+C Difference (%)
      0.3999999999999986
      0 references
      Methanobacterium aarhusense
      16S Identity %
      82.85714285714286
      0 references
      Methanobrevibacter acididurans
      16S Identity %
      82.82527881040892
      0 references
      Thermococcus sibiricus
      16S Identity %
      82.58503401360544
      POCPu
      10.60179257362356
      G+C Difference (%)
      4.770000000000003
      0 references
      Methanobacterium paludis
      16S Identity %
      82.5170068027211
      POCPu
      9.573241061130334
      G+C Difference (%)
      0.29999999999999716
      0 references
      Methanobacterium veterum
      16S Identity %
      82.48882265275708
      POCPu
      8.869093725793958
      G+C Difference (%)
      2.259999999999998
      0 references
      Methanobacterium subterraneum
      16S Identity %
      82.48072880168185
      POCPu
      9.16242480333179
      G+C Difference (%)
      3.969999999999999
      0 references
      Methanobrevibacter ruminantium
      16S Identity %
      82.47206703910615
      POCPu
      6.906686260102865
      G+C Difference (%)
      2.789999999999999
      0 references
      Methanobacterium alcaliphilum
      16S Identity %
      82.45738636363636
      POCPu
      9.911631239550992
      G+C Difference (%)
      2.030000000000001
      0 references
      Methanobacterium movens
      16S Identity %
      82.42677824267783
      0 references
      Methanobacterium flexile
      16S Identity %
      82.41451500348919
      0 references
      Methanothermus sociabilis
      16S Identity %
      82.27241615331964
      0 references
      Methanobrevibacter smithii
      16S Identity %
      82.24489795918367
      POCPu
      7.6965065502183405
      G+C Difference (%)
      4.399999999999999
      0 references
      Methanothermus fervidus
      16S Identity %
      82.24489795918367
      POCPu
      11.46158650843223
      G+C Difference (%)
      3.789999999999999
      0 references
      Methanobrevibacter curvatus
      16S Identity %
      82.2140221402214
      POCPu
      7.468879668049793
      G+C Difference (%)
      9.71
      0 references
      Methanobacterium oryzae
      16S Identity %
      82.09576682859125
      0 references
      Thermococcus aegaeus
      16S Identity %
      82.05841446453408
      0 references
      Methanobacterium beijingense
      16S Identity %
      81.94050991501416
      0 references
      Methanothermobacter tenebrarum
      16S Identity %
      81.89593727726302
      POCPu
      10.981175128351397
      G+C Difference (%)
      6.619999999999997
      0 references
      Methanobacterium arcticum
      16S Identity %
      81.86968838526913
      0 references
      Thermococcus litoralis
      16S Identity %
      81.7687074829932
      POCPu
      9.974891577265463
      G+C Difference (%)
      7.660000000000004
      0 references
      Methanobacterium petrolearium
      16S Identity %
      81.75919250180245
      POCPu
      9.67894239848914
      G+C Difference (%)
      2.3400000000000034
      0 references
      Thermococcus paralvinellae
      16S Identity %
      81.74386920980926
      POCPu
      10.970149253731343
      G+C Difference (%)
      4.869999999999997
      0 references
      Thermococcus gammatolerans
      16S Identity %
      81.70068027210884
      POCPu
      9.438146870379498
      G+C Difference (%)
      18.130000000000003
      0 references
      Thermococcus kodakarensis
      16S Identity %
      81.70068027210884
      POCPu
      9.625923278532285
      G+C Difference (%)
      16.57
      0 references
      Methanothermobacter crinale
      16S Identity %
      81.66666666666667
      0 references
      Thermococcus piezophilus
      16S Identity %
      81.63265306122449
      POCPu
      9.920539369130749
      G+C Difference (%)
      15.68
      0 references
      Methanobacterium formicicum
      16S Identity %
      81.61925601750546
      POCPu
      9.655495664401219
      G+C Difference (%)
      5.939999999999998
      0 references
      Methanothermobacter marburgensis
      16S Identity %
      81.57715839564922
      POCPu
      9.746696035242291
      G+C Difference (%)
      13.21
      0 references
      Thermococcus cleftensis
      16S Identity %
      81.56462585034014
      POCPu
      9.828196058615463
      G+C Difference (%)
      20.39
      0 references
      Thermococcus zilligii
      16S Identity %
      81.55006858710563
      POCPu
      9.842624699919979
      G+C Difference (%)
      19.049999999999997
      0 references
      Methanobacterium movilense
      16S Identity %
      81.54761904761905
      0 references
      Thermococcus thermotolerans
      16S Identity %
      81.5143246930423
      POCPu
      9.632476579389863
      G+C Difference (%)
      18.060000000000002
      0 references
      Methanothermobacter wolfei
      16S Identity %
      81.46341463414633
      0 references
      Methanobacterium congolense
      16S Identity %
      81.45833333333333
      POCPu
      9.671317096240246
      G+C Difference (%)
      3.0600000000000023
      0 references
      Methanobacterium kanagiense
      16S Identity %
      81.4256339958876
      0 references
      Palaeococcus pacificus
      16S Identity %
      81.40180430256765
      POCPu
      10.944759938048529
      G+C Difference (%)
      7.609999999999999
      0 references
      Methanobacterium ferruginis
      16S Identity %
      81.39700641482538
      POCPu
      8.909657320872274
      G+C Difference (%)
      1.9600000000000009
      0 references
      Methanothermobacter thermautotrophicus
      16S Identity %
      81.37321549966009
      POCPu
      9.813829787234042
      G+C Difference (%)
      14.11
      0 references
      Thermococcus eurythermalis
      16S Identity %
      81.34785568413886
      POCPu
      9.536392024981984
      G+C Difference (%)
      18.020000000000003
      0 references
      Methanobacterium aggregans
      16S Identity %
      81.3304721030043
      POCPu
      9.684466019417476
      G+C Difference (%)
      2.710000000000001
      0 references
      Methanobacterium palustre
      16S Identity %
      81.21428571428572
      0 references
      Thermococcus celericrescens
      16S Identity %
      81.15646258503402
      POCPu
      8.832807570977918
      G+C Difference (%)
      18.86
      0 references
      Thermococcus camini
      16S Identity %
      81.08843537414965
      POCPu
      9.66231205324131
      G+C Difference (%)
      19.200000000000003
      0 references
      Methanoculleus marisnigri
      16S Identity %
      80.94262295081968
      POCPu
      6.139747995418098
      G+C Difference (%)
      26.630000000000003
      0 references
      Methanotorris igneus
      16S Identity %
      80.80326752893124
      POCPu
      10.091743119266056
      G+C Difference (%)
      3.1300000000000026
      0 references
      Methanotorris formicicus
      16S Identity %
      80.79019073569482
      POCPu
      9.573361082206034
      G+C Difference (%)
      2.990000000000002
      0 references
      Methanothermobacter defluvii
      16S Identity %
      80.72625698324022
      0 references
      Methanococcus aeolicus
      16S Identity %
      80.43626448534424
      POCPu
      8.330888823701965
      G+C Difference (%)
      5.390000000000001
      0 references
      Methanothermobacter wolfeii
      POCPu
      9.785522788203753
      G+C Difference (%)
      13.240000000000002
      0 references
      CAZyme
      GH101
      Occurance
      1
      0 references
      GH13
      Occurance
      1
      0 references
      GT2
      Occurance
      9
      0 references
      GT7
      Occurance
      1
      0 references
      GT13
      Occurance
      2
      0 references
      GT66
      Occurance
      1
      0 references
      GT22
      Occurance
      1
      0 references
      GT4
      Occurance
      6
      0 references
      GT0
      Occurance
      3
      0 references
      CE9
      Occurance
      1
      0 references
      CE14
      Occurance
      1
      0 references
      CBM50
      Occurance
      10
      0 references
      CBM48
      Occurance
      1
      0 references
      Pathway
      Ecosystem
      MAGs
      no MAG matches found
      0 references
       
      Retrieved from "https://taxakg.zbmed.de/w/index.php?title=Item:Q337605&oldid=5491734"