Jump to content

GCA_038874075.1 (Q335904): Difference between revisions

Add links
From wikibase
← Older edit
Admin (talk | contribs)
Bots, Bureaucrats, Interface administrators, Administrators
5,472,969 edits
‎Changed an Item
‎Changed an Item
 
(3 intermediate revisions by the same user not shown)
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 7
Amount7
Unit1
Property / CAZyme
 
Property / CAZyme: GH92 / rank
 
Normal rank
Property / CAZyme: GH92 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH2 / rank
 
Normal rank
Property / CAZyme: GH2 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH28 / rank
 
Normal rank
Property / CAZyme: GH28 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH57 / rank
 
Normal rank
Property / CAZyme: GH57 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH15 / rank
 
Normal rank
Property / CAZyme: GH15 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH16 / rank
 
Normal rank
Property / CAZyme: GH16 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH1 / rank
 
Normal rank
Property / CAZyme: GH1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH43 / rank
 
Normal rank
Property / CAZyme: GH43 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH130 / rank
 
Normal rank
Property / CAZyme: GH130 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH105 / rank
 
Normal rank
Property / CAZyme: GH105 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH78 / rank
 
Normal rank
Property / CAZyme: GH78 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT22 / rank
 
Normal rank
Property / CAZyme: GT22 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT35 / rank
 
Normal rank
Property / CAZyme: GT35 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 9
Amount9
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 8
Amount8
Unit1
Property / CAZyme
 
Property / CAZyme: GT26 / rank
 
Normal rank
Property / CAZyme: GT26 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: CBM13 / rank
 
Normal rank
Property / CAZyme: CBM13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM51 / rank
 
Normal rank
Property / CAZyme: CBM51 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / rank
 
Normal rank
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamate degradation II / rank
 
Normal rank
Property / Pathway: Glutamate degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 22:18, 28 September 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_038874075.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Caldisphaera lagunensis
      16S Identity %
      29.025570145127848
      POCPu
      2.01597565614302
      G+C Difference (%)
      4.479999999999997
      0 references
      Acidilobus saccharovorans
      16S Identity %
      27.918088737201362
      POCPu
      2.8768699654775602
      G+C Difference (%)
      22.71
      0 references
      Methanobrevibacter millerae
      16S Identity %
      27.380952380952383
      POCPu
      2.44745177080334
      G+C Difference (%)
      1.9100000000000037
      0 references
      Thermoproteus tenax
      16S Identity %
      27.33469665985003
      POCPu
      1.8472135253600501
      G+C Difference (%)
      20.620000000000005
      0 references
      Pyrodictium brockii
      16S Identity %
      27.072243346007607
      0 references
      Methanobrevibacter filiformis
      16S Identity %
      27.005150846210448
      POCPu
      3.5174227481919793
      G+C Difference (%)
      7.52
      0 references
      Hyperthermus butylicus
      16S Identity %
      26.985350809560526
      POCPu
      3.44474761255116
      G+C Difference (%)
      19.230000000000004
      0 references
      Aeropyrum camini
      16S Identity %
      26.71863926293409
      POCPu
      2.483564645726808
      G+C Difference (%)
      22.22
      0 references
      Pyrobaculum ferrireducens
      16S Identity %
      26.430517711171664
      POCPu
      1.2026612077789152
      G+C Difference (%)
      22.46
      0 references
      Geoglobus ahangari
      16S Identity %
      26.293706293706293
      POCPu
      4.016576346828179
      G+C Difference (%)
      18.6
      0 references
      Vulcanisaeta thermophila
      16S Identity %
      26.212227687983138
      POCPu
      1.8948655256723717
      G+C Difference (%)
      14.57
      0 references
      Archaeoglobus infectus
      16S Identity %
      26.15493958777541
      0 references
      Vulcanisaeta souniana
      16S Identity %
      26.05099931082012
      POCPu
      1.5898251192368837
      G+C Difference (%)
      10.620000000000005
      0 references
      Nitrosopumilus piranensis
      16S Identity %
      25.97402597402597
      POCPu
      1.3854679802955665
      G+C Difference (%)
      0.6899999999999977
      0 references
      Thermoproteus thermophilus
      16S Identity %
      25.918079096045197
      0 references
      Nitrosopumilus cobalaminigenes
      16S Identity %
      25.786593707250343
      0 references
      Methanobrevibacter curvatus
      16S Identity %
      25.737463126843657
      POCPu
      3.4785435630689205
      G+C Difference (%)
      8.79
      0 references
      Archaeoglobus veneficus
      16S Identity %
      25.64625850340136
      POCPu
      5.035308566165183
      G+C Difference (%)
      12.54
      0 references
      Methanofollis formosanus
      16S Identity %
      25.64102564102564
      POCPu
      2.304635761589404
      G+C Difference (%)
      25.810000000000002
      0 references
      Pyrobaculum neutrophilum
      16S Identity %
      25.544959128065397
      POCPu
      1.6164817749603804
      G+C Difference (%)
      25.4
      0 references
      Nitrosopumilus oxyclinae
      16S Identity %
      25.444596443228455
      0 references
      Methanobrevibacter arboriphilus
      16S Identity %
      25.376685170499602
      POCPu
      3.7352555701179555
      G+C Difference (%)
      9.069999999999997
      0 references
      Methermicoccus shengliensis
      16S Identity %
      25.26080476900149
      POCPu
      4.0899042004421515
      G+C Difference (%)
      20.060000000000002
      0 references
      Pyrobaculum organotrophum
      16S Identity %
      25.23098791755508
      0 references
      Methanoculleus bourgensis
      16S Identity %
      24.900556881463803
      POCPu
      2.302805717310746
      G+C Difference (%)
      26.130000000000003
      0 references
      Picrophilus torridus
      16S Identity %
      24.845147969717825
      0 references
      Natronosalvus amylolyticus
      16S Identity %
      24.81203007518797
      POCPu
      0.9844457570387871
      G+C Difference (%)
      24.980000000000004
      0 references
      Pyrobaculum calidifontis
      16S Identity %
      24.7275204359673
      POCPu
      1.6494845360824744
      G+C Difference (%)
      22.64
      0 references
      Methanococcus maripaludis
      16S Identity %
      24.609929078014183
      POCPu
      3.764544832306639
      G+C Difference (%)
      1.5899999999999963
      0 references
      Caldivirga maquilingensis
      16S Identity %
      24.58448753462604
      POCPu
      1.7290160326941213
      G+C Difference (%)
      8.590000000000003
      0 references
      Pyrobaculum igneiluti
      16S Identity %
      24.455040871934607
      0 references
      Saliphagus infecundisoli
      16S Identity %
      24.316939890710383
      POCPu
      0.7749207467418106
      G+C Difference (%)
      29.690000000000005
      0 references
      Methanobrevibacter thaueri
      16S Identity %
      24.287974683544302
      POCPu
      2.7743526510480887
      G+C Difference (%)
      2.3599999999999994
      0 references
      Archaeoglobus neptunius
      16S Identity %
      24.23417290673928
      POCPu
      4.144195288106727
      G+C Difference (%)
      11.54
      0 references
      Vulcanisaeta distributa
      16S Identity %
      24.182561307901906
      POCPu
      1.8508437670114317
      G+C Difference (%)
      10.920000000000002
      0 references
      Thermocladium modestius
      16S Identity %
      24.171270718232044
      POCPu
      2.053588891061999
      G+C Difference (%)
      18.630000000000003
      0 references
      Methanobrevibacter cuticularis
      16S Identity %
      24.159021406727827
      POCPu
      3.376459450930893
      G+C Difference (%)
      7.719999999999999
      0 references
      Nitrosopumilus maritimus
      16S Identity %
      24.104477611940297
      POCPu
      1.3438216978039987
      G+C Difference (%)
      0.3399999999999963
      0 references
      Picrophilus oshimae
      16S Identity %
      24.06015037593985
      POCPu
      2.453531598513011
      G+C Difference (%)
      1.4699999999999989
      0 references
      Thermococcus aggregans
      16S Identity %
      24.031007751937985
      POCPu
      6.086679413639261
      G+C Difference (%)
      8.830000000000005
      0 references
      Stetteria hydrogenophila
      16S Identity %
      23.959938366718028
      0 references
      Methanonatronarchaeum thermophilum
      16S Identity %
      23.959044368600683
      POCPu
      3.6259541984732824
      G+C Difference (%)
      3.3900000000000006
      0 references
      Conexivisphaera calida
      16S Identity %
      23.73806275579809
      POCPu
      2.097130242825607
      G+C Difference (%)
      27.560000000000002
      0 references
      Pyrobaculum oguniense
      16S Identity %
      23.70778773259821
      POCPu
      1.4335145823035098
      G+C Difference (%)
      20.54
      0 references
      Natronosalvus rutilus
      16S Identity %
      23.702185792349727
      POCPu
      0.8990447649372543
      G+C Difference (%)
      28.450000000000003
      0 references
      Archaeoglobus fulgidus
      16S Identity %
      23.501362397820163
      POCPu
      4.334621755935947
      G+C Difference (%)
      14.07
      0 references
      Ignicoccus pacificus
      16S Identity %
      22.942073170731707
      POCPu
      2.990033222591362
      G+C Difference (%)
      13.670000000000002
      0 references
      Methanobrevibacter woesei
      16S Identity %
      22.781954887218046
      POCPu
      3.4996276991809383
      G+C Difference (%)
      4.609999999999999
      0 references
      Cuniculiplasma divulgatum
      16S Identity %
      22.19945355191257
      POCPu
      1.6318537859007836
      G+C Difference (%)
      2.789999999999999
      0 references
      Carbon source
      starch
      0 references
      CAZyme
      GH0
      Occurance
      7
      0 references
      GH92
      Occurance
      1
      0 references
      GH2
      Occurance
      1
      0 references
      GH28
      Occurance
      1
      0 references
      GH57
      Occurance
      1
      0 references
      GH15
      Occurance
      1
      0 references
      GH16
      Occurance
      1
      0 references
      GH1
      Occurance
      1
      0 references
      GH43
      Occurance
      1
      0 references
      GH130
      Occurance
      2
      0 references
      GH105
      Occurance
      2
      0 references
      GH78
      Occurance
      1
      0 references
      GT22
      Occurance
      1
      0 references
      GT35
      Occurance
      1
      0 references
      GT2
      Occurance
      9
      0 references
      GT4
      Occurance
      8
      0 references
      GT26
      Occurance
      1
      0 references
      CBM50
      Occurance
      2
      0 references
      CBM13
      Occurance
      1
      0 references
      CBM51
      Occurance
      1
      0 references
      MAGs
      no MAG matches found
      0 references
       
      Retrieved from "https://taxakg.zbmed.de/w/index.php?title=Item:Q335904&oldid=5485228"