Jump to content

GCA_038728085.1 (Q335357): Difference between revisions

Add links
From wikibase
← Older edit
Admin (talk | contribs)
Bots, Bureaucrats, Interface administrators, Administrators
5,472,969 edits
‎Changed an Item
‎Changed an Item
 
(2 intermediate revisions by the same user not shown)
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: beta-Oxidation, acyl-CoA synthesis / rank
 
Normal rank
Property / Pathway: beta-Oxidation, acyl-CoA synthesis / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: CAM (Crassulacean acid metabolism), dark / rank
 
Normal rank
Property / Pathway: CAM (Crassulacean acid metabolism), dark / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Formaldehyde assimilation, ribulose monophosphate pathway / rank
 
Normal rank
Property / Pathway: Formaldehyde assimilation, ribulose monophosphate pathway / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / rank
 
Normal rank
Property / Pathway: Histidine degradation, histidine => N-formiminoglutamate => glutamate / qualifier
 
Property / Pathway
 
Property / Pathway: De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP / rank
 
Normal rank
Property / Pathway: De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Tryptophan degradation / rank
 
Normal rank
Property / Pathway: Tryptophan degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Methionine degradation II / rank
 
Normal rank
Property / Pathway: Methionine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamine degradation II / rank
 
Normal rank
Property / Pathway: Glutamine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Histidine degradation / rank
 
Normal rank
Property / Pathway: Histidine degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Lactate production / rank
 
Normal rank
Property / Pathway: Lactate production / qualifier
 
Property / Pathway
 
Property / Pathway: Succinate production / rank
 
Normal rank
Property / Pathway: Succinate production / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.1
Amount0.1
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: GCA_011364585.1_ASM1136458v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_011364585.1_ASM1136458v1_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_011366615.1_ASM1136661v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_011366615.1_ASM1136661v1_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300017398_19.fna / rank
 
Normal rank
Property / MAGs: 3300017398_19.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300017400_25.fna / rank
 
Normal rank
Property / MAGs: 3300017400_25.fna / qualifier
 

Latest revision as of 21:26, 28 September 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_038728085.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Thermococcus litoralis
      16S Identity %
      29.709655638082378
      POCPu
      9.153713298791018
      G+C Difference (%)
      3.9499999999999957
      0 references
      Aeropyrum camini
      16S Identity %
      27.177700348432055
      POCPu
      7.084639498432602
      G+C Difference (%)
      9.689999999999998
      0 references
      Aeropyrum pernix
      16S Identity %
      26.84797768479777
      POCPu
      6.933414783139891
      G+C Difference (%)
      9.270000000000003
      0 references
      Thermofilum pendens
      16S Identity %
      26.65773610180844
      POCPu
      8.632061944364782
      G+C Difference (%)
      10.61
      0 references
      Pyrococcus furiosus
      16S Identity %
      26.446837146702556
      POCPu
      10.114816839803172
      G+C Difference (%)
      6.269999999999996
      0 references
      Pyrococcus woesei
      16S Identity %
      26.08098833218943
      0 references
      Pyrococcus kukulkanii
      16S Identity %
      25.99594868332208
      POCPu
      9.639830508474576
      G+C Difference (%)
      2.4200000000000017
      0 references
      Pyrobaculum igneiluti
      16S Identity %
      25.987943737441395
      0 references
      Ignisphaera aggregans
      16S Identity %
      25.968728755948334
      POCPu
      6.666666666666667
      G+C Difference (%)
      11.350000000000001
      0 references
      Pyrococcus glycovorans
      16S Identity %
      25.90489709013485
      0 references
      Thermococcus gammatolerans
      16S Identity %
      25.797691785471827
      POCPu
      9.06166219839142
      G+C Difference (%)
      6.520000000000003
      0 references
      Pyrodictium delaneyi
      16S Identity %
      25.68745808182428
      POCPu
      7.673402512288368
      G+C Difference (%)
      6.869999999999997
      0 references
      Vulcanisaeta distributa
      16S Identity %
      25.68745808182428
      POCPu
      6.1318468250121185
      G+C Difference (%)
      1.6099999999999994
      0 references
      Stetteria hydrogenophila
      16S Identity %
      25.64102564102564
      0 references
      Thermofilum uzonense
      16S Identity %
      25.618729096989966
      POCPu
      8.120578283605044
      G+C Difference (%)
      0.8999999999999986
      0 references
      Thermococcus piezophilus
      16S Identity %
      25.510204081632654
      POCPu
      9.359477124183007
      G+C Difference (%)
      4.07
      0 references
      Pyrobaculum calidifontis
      16S Identity %
      25.486250838363517
      POCPu
      5.562776189238368
      G+C Difference (%)
      10.11
      0 references
      Thermococcus eurythermalis
      16S Identity %
      25.47554347826087
      POCPu
      9.074315514993481
      G+C Difference (%)
      6.410000000000004
      0 references
      Pyrodictium occultum
      16S Identity %
      25.369127516778523
      POCPu
      8.21748532591906
      G+C Difference (%)
      16.46
      0 references
      Desulfurococcus amylolyticus
      16S Identity %
      25.33783783783784
      POCPu
      8.710445729840082
      G+C Difference (%)
      1.8800000000000026
      0 references
      Staphylothermus hellenicus
      16S Identity %
      25.301204819277107
      POCPu
      8.838226108682074
      G+C Difference (%)
      10.199999999999996
      0 references
      Pyrolobus fumarii
      16S Identity %
      25.28985507246377
      POCPu
      7.405345211581292
      G+C Difference (%)
      7.859999999999999
      0 references
      Thermococcus paralvinellae
      16S Identity %
      25.26954177897574
      POCPu
      9.967497291440953
      G+C Difference (%)
      6.740000000000002
      0 references
      Pyrococcus horikoshii
      16S Identity %
      25.172890733056708
      POCPu
      9.953434225844005
      G+C Difference (%)
      5.159999999999997
      0 references
      Desulfurococcus mucosus
      16S Identity %
      25.100671140939596
      POCPu
      8.33902939166097
      G+C Difference (%)
      6.100000000000001
      0 references
      Ignicoccus islandicus
      16S Identity %
      25.017182130584192
      POCPu
      7.32258064516129
      G+C Difference (%)
      2.1400000000000006
      0 references
      Thermogladius calderae
      16S Identity %
      24.949698189134807
      POCPu
      8.162579778300302
      G+C Difference (%)
      8.600000000000001
      0 references
      Sulfophobococcus zilligii
      16S Identity %
      24.9485949280329
      0 references
      Thermodiscus maritimus
      16S Identity %
      24.877365101611773
      0 references
      Thermococcus thermotolerans
      16S Identity %
      24.813052345343305
      POCPu
      9.048239895697522
      G+C Difference (%)
      6.450000000000003
      0 references
      Fervidicoccus fontis
      16S Identity %
      24.765729585006692
      POCPu
      8.041237113402062
      G+C Difference (%)
      9.57
      0 references
      Thermococcus sibiricus
      16S Identity %
      24.747134187457856
      POCPu
      9.53312831982108
      G+C Difference (%)
      6.839999999999996
      0 references
      Caldivirga maquilingensis
      16S Identity %
      24.691358024691358
      POCPu
      4.872006606110652
      G+C Difference (%)
      3.9399999999999977
      0 references
      Thermosphaera aggregans
      16S Identity %
      24.648359008707303
      POCPu
      8.919555705149781
      G+C Difference (%)
      0.3100000000000023
      0 references
      Thermococcus kodakarensis
      16S Identity %
      24.559023066485754
      POCPu
      8.813646937193074
      G+C Difference (%)
      4.960000000000001
      0 references
      Thermococcus coalescens
      16S Identity %
      24.49255751014885
      0 references
      Thermococcus cleftensis
      16S Identity %
      24.390243902439025
      POCPu
      9.449035812672177
      G+C Difference (%)
      8.780000000000001
      0 references
      Thermococcus henrietii
      16S Identity %
      24.390243902439025
      POCPu
      8.791773778920309
      G+C Difference (%)
      7.539999999999999
      0 references
      Conexivisphaera calida
      16S Identity %
      24.364123159303883
      POCPu
      7.634069400630914
      G+C Difference (%)
      15.030000000000001
      0 references
      Saccharolobus caldissimus
      16S Identity %
      24.135593220338983
      POCPu
      4.761904761904762
      G+C Difference (%)
      14.14
      0 references
      Acidilobus saccharovorans
      16S Identity %
      23.74245472837022
      POCPu
      6.832298136645963
      G+C Difference (%)
      10.18
      0 references
      Hyperthermus butylicus
      16S Identity %
      23.71987951807229
      POCPu
      8.303782505910165
      G+C Difference (%)
      6.700000000000003
      0 references
      Vulcanisaeta souniana
      16S Identity %
      23.61015785861359
      POCPu
      5.1822053951727405
      G+C Difference (%)
      1.9099999999999966
      0 references
      Thermofilum adornatum
      16S Identity %
      23.438549361987913
      POCPu
      8.524876345650275
      G+C Difference (%)
      0.5300000000000011
      0 references
      Pyrodictium brockii
      16S Identity %
      23.4375
      0 references
      Palaeococcus helgesonii
      16S Identity %
      23.103688239387612
      0 references
      Sulfolobus acidocaldarius
      16S Identity %
      23.10275352585628
      POCPu
      4.806954743032472
      G+C Difference (%)
      10.329999999999998
      0 references
      Ignicoccus hospitalis
      16S Identity %
      23.01196340605208
      POCPu
      7.224958949096879
      G+C Difference (%)
      9.480000000000004
      0 references
      Pyrofollis japonicus
      16S Identity %
      22.99393122049899
      POCPu
      7.904919845218353
      G+C Difference (%)
      2.3200000000000003
      0 references
      Vulcanisaeta thermophila
      16S Identity %
      22.6546212647672
      POCPu
      6.229860365198711
      G+C Difference (%)
      2.039999999999999
      0 references
      CAZyme
      GH133
      Occurance
      1
      0 references
      GH101
      Occurance
      1
      0 references
      GH57
      Occurance
      1
      0 references
      GH1
      Occurance
      1
      0 references
      GH105
      Occurance
      1
      0 references
      GH0
      Occurance
      3
      0 references
      GH16
      Occurance
      1
      0 references
      GH109
      Occurance
      1
      0 references
      GT7
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT66
      Occurance
      1
      0 references
      GT51
      Occurance
      1
      0 references
      GT2
      Occurance
      14
      0 references
      GT4
      Occurance
      11
      0 references
      GT0
      Occurance
      1
      0 references
      CE4
      Occurance
      1
      0 references
      CBM50
      Occurance
      5
      0 references
      Pathway
       
      Retrieved from "https://taxakg.zbmed.de/w/index.php?title=Item:Q335357&oldid=5480694"