Jump to content

GCA_000993595.1 (Q314998): Difference between revisions

Add links
From wikibase
← Older edit
Admin (talk | contribs)
Bots, Bureaucrats, Interface administrators, Administrators
5,470,625 edits
‎Changed an Item
‎Changed an Item
 
(2 intermediate revisions by the same user not shown)
Property / Pathway
 
Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank
 
Normal rank
Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier
 
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Proline biosynthesis, glutamate => proline / rank
 
Normal rank
Property / Pathway: Proline biosynthesis, glutamate => proline / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Glutathione biosynthesis, glutamate => glutathione / rank
 
Normal rank
Property / Pathway: Glutathione biosynthesis, glutamate => glutathione / qualifier
 
Property / Pathway
 
Property / Pathway: F-type ATPase, prokaryotes and chloroplasts / rank
 
Normal rank
Property / Pathway: F-type ATPase, prokaryotes and chloroplasts / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA / rank
 
Normal rank
Property / Pathway: Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank
 
Normal rank
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha / rank
 
Normal rank
Property / Pathway: GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha / qualifier
 
Property / Pathway
 
Property / Pathway: Alanine degradation II / rank
 
Normal rank
Property / Pathway: Alanine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Serine degradation / rank
 
Normal rank
Property / Pathway: Serine degradation / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 10:44, 28 September 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_000993595.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Clostridium chrysemydis
      16S Identity %
      28.540462427745666
      POCPu
      2.432077125328659
      G+C Difference (%)
      9.61
      0 references
      Clostridium cavendishii
      16S Identity %
      28.332170272156315
      POCPu
      2.0943329813445972
      G+C Difference (%)
      10.59
      0 references
      Clostridium colicanis
      16S Identity %
      27.864214992927867
      0 references
      Caloramator coolhaasii
      16S Identity %
      27.6536312849162
      0 references
      Dehalococcoides mccartyi
      16S Identity %
      27.49648382559775
      POCPu
      3.536629375676651
      G+C Difference (%)
      10.39
      0 references
      Thermoflavimicrobium daqui
      16S Identity %
      26.94693314955203
      POCPu
      2.751322751322751
      G+C Difference (%)
      0.6400000000000006
      0 references
      Haloimpatiens lingqiaonensis
      16S Identity %
      26.796929518492675
      POCPu
      2.677279305354559
      G+C Difference (%)
      7.740000000000002
      0 references
      Caloramator australicus
      16S Identity %
      26.662001399580127
      POCPu
      3.488073865093614
      G+C Difference (%)
      5.689999999999998
      0 references
      Clostridium baratii
      16S Identity %
      26.448011165387296
      POCPu
      2.9482841952634122
      G+C Difference (%)
      10.46
      0 references
      Clostridium cylindrosporum
      16S Identity %
      26.413793103448274
      POCPu
      3.0256012412723043
      G+C Difference (%)
      7.010000000000002
      0 references
      Clostridium moniliforme
      16S Identity %
      26.378227494766225
      POCPu
      3.0997304582210243
      G+C Difference (%)
      11.810000000000002
      0 references
      Caloramator boliviensis
      16S Identity %
      26.31954350927247
      0 references
      Clostridium drakei
      16S Identity %
      25.997248968363134
      POCPu
      2.0441010783840334
      G+C Difference (%)
      8.95
      0 references
      Caloramator proteoclasticus
      16S Identity %
      25.894134477825464
      POCPu
      3.8031914893617023
      G+C Difference (%)
      7.109999999999999
      0 references
      Clostridium hydrogeniformans
      16S Identity %
      25.8765778401122
      POCPu
      2.357920193470375
      G+C Difference (%)
      9.09
      0 references
      Clostridium muellerianum
      16S Identity %
      25.843503230437904
      POCPu
      1.9949335022165928
      G+C Difference (%)
      9.010000000000002
      0 references
      Clostridium vincentii
      16S Identity %
      25.815405968077727
      POCPu
      2.5819049685398134
      G+C Difference (%)
      7.760000000000002
      0 references
      Caloramator indicus
      16S Identity %
      25.8086717136958
      0 references
      Armatimonas rosea
      16S Identity %
      25.704225352112676
      POCPu
      1.260444696218666
      G+C Difference (%)
      23.9
      0 references
      Clostridium carboxidivorans
      16S Identity %
      25.653370013755154
      POCPu
      1.8991282689912827
      G+C Difference (%)
      8.530000000000001
      0 references
      Thermobrachium celere
      16S Identity %
      25.6198347107438
      POCPu
      4.455583402951824
      G+C Difference (%)
      9.530000000000001
      0 references
      Anaeromonas gelatinilytica
      16S Identity %
      25.447042640990368
      POCPu
      2.621264086232239
      G+C Difference (%)
      9.64
      0 references
      Clostridium chromiireducens
      16S Identity %
      25.366876310272534
      POCPu
      2.0829861689718383
      G+C Difference (%)
      8.34
      0 references
      Clostridium gasigenes
      16S Identity %
      25.27777777777778
      POCPu
      2.3785926660059467
      G+C Difference (%)
      9.8
      0 references
      Clostridium putrefaciens
      16S Identity %
      25.138504155124654
      POCPu
      2.5919526042952357
      G+C Difference (%)
      8.100000000000001
      0 references
      Clostridium akagii
      16S Identity %
      24.931129476584022
      POCPu
      2.4022947292936534
      G+C Difference (%)
      7.740000000000002
      0 references
      Proteiniclasticum ruminis
      16S Identity %
      24.896836313617605
      POCPu
      2.173382173382173
      G+C Difference (%)
      4.609999999999999
      0 references
      Clostridium pasteurianum
      16S Identity %
      24.896836313617605
      POCPu
      2.429227237949503
      G+C Difference (%)
      8.52
      0 references
      Tepidiforma bonchosmolovskayae
      16S Identity %
      24.742974640164498
      POCPu
      2.443369814202087
      G+C Difference (%)
      31.419999999999995
      0 references
      Fonticella tunisiensis
      16S Identity %
      24.72451790633609
      POCPu
      3.6787689348401056
      G+C Difference (%)
      1.4500000000000028
      0 references
      Clostridium uliginosum
      16S Identity %
      24.696645253390432
      POCPu
      2.77424819991529
      G+C Difference (%)
      10.36
      0 references
      Alkalicella caledoniensis
      16S Identity %
      24.671532846715326
      POCPu
      2.6014568158168574
      G+C Difference (%)
      2.259999999999998
      0 references
      Dehalogenimonas alkenigignens
      16S Identity %
      24.613220815752463
      POCPu
      3.3801020408163267
      G+C Difference (%)
      17.36
      0 references
      Clostridium tarantellae
      16S Identity %
      24.603721571330116
      POCPu
      2.7403414195867026
      G+C Difference (%)
      12.690000000000001
      0 references
      Dehalogenimonas formicexedens
      16S Identity %
      24.587912087912088
      POCPu
      3.334316907642372
      G+C Difference (%)
      15.5
      0 references
      Dehalogenimonas lykanthroporepellens
      16S Identity %
      24.519230769230766
      POCPu
      3.0878859857482186
      G+C Difference (%)
      16.58
      0 references
      Clostridium paraputrificum
      16S Identity %
      24.284717376133987
      POCPu
      2.551457975986278
      G+C Difference (%)
      8.470000000000002
      0 references
      Clostridium bovifaecis
      16S Identity %
      24.275862068965516
      POCPu
      2.404727939678011
      G+C Difference (%)
      5.840000000000003
      0 references
      Alpinimonas psychrophila
      16S Identity %
      24.261168384879724
      POCPu
      2.005308168681805
      G+C Difference (%)
      20.14
      0 references
      Fervidicella metallireducens
      16S Identity %
      24.199288256227756
      POCPu
      3.0661516175760504
      G+C Difference (%)
      6.420000000000002
      0 references
      Clostridium weizhouense
      16S Identity %
      24.15691672401927
      POCPu
      2.653018592020054
      G+C Difference (%)
      12
      0 references
      Clostridium acidisoli
      16S Identity %
      24.093816631130064
      POCPu
      2.632099742727093
      G+C Difference (%)
      8.36
      0 references
      Dehalogenimonas etheniformans
      16S Identity %
      23.96978021978022
      POCPu
      3.3030303030303028
      G+C Difference (%)
      13.469999999999999
      0 references
      Clostridium argentinense
      16S Identity %
      23.9504473503097
      POCPu
      2.093954843408594
      G+C Difference (%)
      9.86
      0 references
      Clostridium cellulovorans
      16S Identity %
      23.796423658872076
      POCPu
      2.0688425182807206
      G+C Difference (%)
      7.25
      0 references
      Clostridium perfringens
      16S Identity %
      23.484848484848484
      POCPu
      2.9961649089165867
      G+C Difference (%)
      10.130000000000003
      0 references
      Clostridium thailandense
      16S Identity %
      23.45201238390093
      POCPu
      1.8270054239223523
      G+C Difference (%)
      7.32
      0 references
      Sporacetigenium mesophilum
      16S Identity %
      23.230240549828178
      0 references
      Clostridium kogasense
      16S Identity %
      23.021582733812952
      0 references
      Sporosalibacterium faouarense
      16S Identity %
      22.696011004126547
      POCPu
      2.3993808049535605
      G+C Difference (%)
      7.620000000000001
      0 references
      CAZyme
      GH13
      Occurance
      2
      0 references
      GH6
      Occurance
      1
      0 references
      GH3
      Occurance
      1
      0 references
      GH28
      Occurance
      1
      0 references
      GH0
      Occurance
      2
      0 references
      GH23
      Occurance
      1
      0 references
      GH43
      Occurance
      1
      0 references
      GT7
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT51
      Occurance
      1
      0 references
      GT0
      Occurance
      1
      0 references
      GT4
      Occurance
      21
      0 references
      GT26
      Occurance
      3
      0 references
      GT2
      Occurance
      15
      0 references
      GT28
      Occurance
      3
      0 references
      CE1
      Occurance
      1
      0 references
      CE4
      Occurance
      1
      0 references
      CE14
      Occurance
      1
      0 references
      CBM50
      Occurance
      6
      0 references
      CBM13
      Occurance
      2
      0 references
      MAGs
      no MAG matches found
      0 references
       
      Retrieved from "https://taxakg.zbmed.de/w/index.php?title=Item:Q314998&oldid=5423013"