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Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank
 
Normal rank
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: V/A-type ATPase, prokaryotes / rank
 
Normal rank
Property / Pathway: V/A-type ATPase, prokaryotes / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme M biosynthesis / rank
 
Normal rank
Property / Pathway: Coenzyme M biosynthesis / qualifier
 
Property / Pathway
 
Property / Pathway: F420 biosynthesis, archaea / rank
 
Normal rank
Property / Pathway: F420 biosynthesis, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / rank
 
Normal rank
Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / qualifier
 
Property / Pathway
 
Property / Pathway: Isoleucine biosynthesis, pyruvate => 2-oxobutanoate / rank
 
Normal rank
Property / Pathway: Isoleucine biosynthesis, pyruvate => 2-oxobutanoate / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: 2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate / rank
 
Normal rank
Property / Pathway: 2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank
 
Normal rank
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA / rank
 
Normal rank
Property / Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / rank
 
Normal rank
Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, CO2 => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, CO2 => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, acetate => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, acetate => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamate degradation II / rank
 
Normal rank
Property / Pathway: Glutamate degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Alanine degradation II / rank
 
Normal rank
Property / Pathway: Alanine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine degradation I / rank
 
Normal rank
Property / Pathway: Cysteine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Serine degradation / rank
 
Normal rank
Property / Pathway: Serine degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis from carbon dioxide / rank
 
Normal rank
Property / Pathway: Methanogenesis from carbon dioxide / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0.07
Amount0.07
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 3
Amount3
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.07
Amount0.07
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 1.3
Amount1.3
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0.04
Amount0.04
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.07
Amount0.07
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 1.1
Amount1.1
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.96
Amount0.96
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 2.3
Amount2.3
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.37
Amount0.37
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 14.1
Amount14.1
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 4.9
Amount4.9
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.25
Amount0.25
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 3.9
Amount3.9
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 1.4
Amount1.4
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 1.34
Amount1.34
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.57
Amount0.57
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: 3300022181_47.fna / rank
 
Normal rank
Property / MAGs: 3300022181_47.fna / qualifier
 

Latest revision as of 21:26, 25 September 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCF_003491305.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Methanobacterium formicicum
      16S Identity %
      97.74709302325581
      POCPu
      89.05263157894737
      ANI %
      94.7213
      G+C Difference (%)
      0.030000000000001137
      0 references
      Methanobacterium subterraneum
      16S Identity %
      96.71787709497207
      POCPu
      79.16753381893861
      ANI %
      81.3594
      G+C Difference (%)
      2
      0 references
      Methanobacterium palustre
      16S Identity %
      95.72953736654804
      0 references
      Methanobacterium ferruginis
      16S Identity %
      95.5965909090909
      POCPu
      73.9335598338996
      ANI %
      79.8725
      G+C Difference (%)
      4.009999999999998
      0 references
      Methanobacterium petrolearium
      16S Identity %
      95.54597701149426
      POCPu
      75.39732994278448
      ANI %
      79.3488
      G+C Difference (%)
      3.6299999999999955
      0 references
      Methanobacterium kanagiense
      16S Identity %
      95.27720739219713
      0 references
      Methanobacterium bryantii
      16S Identity %
      95
      POCPu
      56.79620186390012
      G+C Difference (%)
      8.21
      0 references
      Methanobacterium paludis
      16S Identity %
      94.84396200814112
      POCPu
      62.204234122042344
      G+C Difference (%)
      5.670000000000002
      0 references
      Methanobacterium veterum
      16S Identity %
      94.72902746844841
      POCPu
      57.46414025146095
      G+C Difference (%)
      8.229999999999997
      0 references
      Methanobacterium arcticum
      16S Identity %
      94.56214689265536
      0 references
      Methanobacterium lacus
      16S Identity %
      94.49814126394051
      POCPu
      58.96911433831049
      G+C Difference (%)
      5.57
      0 references
      Methanobacterium oryzae
      16S Identity %
      94.39058171745152
      0 references
      Methanobacterium aggregans
      16S Identity %
      94.29386590584879
      POCPu
      64.67521181837932
      G+C Difference (%)
      3.259999999999998
      0 references
      Methanobacterium movilense
      16S Identity %
      94.11764705882352
      0 references
      Methanobacterium beijingense
      16S Identity %
      93.98443029016278
      0 references
      Methanobacterium congolense
      16S Identity %
      93.97506925207756
      POCPu
      63.391341256366715
      G+C Difference (%)
      2.9099999999999966
      0 references
      Methanobacterium alkalithermotolerans
      16S Identity %
      93.88609715242882
      POCPu
      58.55437665782494
      G+C Difference (%)
      5.049999999999997
      0 references
      Methanobacterium aarhusense
      16S Identity %
      93.61861861861863
      0 references
      Methanobacterium ivanovii
      16S Identity %
      93.57344632768361
      0 references
      Methanobacterium alcaliphilum
      16S Identity %
      93.48441926345609
      POCPu
      60.44967880085653
      G+C Difference (%)
      8
      0 references
      Methanobacterium movens
      16S Identity %
      93.46314325452016
      0 references
      Methanobacterium flexile
      16S Identity %
      93.39360222531293
      0 references
      Methanobacterium spitsbergense
      16S Identity %
      93.00582847626978
      POCPu
      59.45840639002533
      G+C Difference (%)
      8.879999999999995
      0 references
      Methanothermobacter thermautotrophicus
      16S Identity %
      92.26069246435846
      POCPu
      51.26090030638699
      G+C Difference (%)
      8.14
      0 references
      Methanothermobacter marburgensis
      16S Identity %
      92.12491513917176
      POCPu
      52.36938031591738
      G+C Difference (%)
      7.240000000000002
      0 references
      Methanobrevibacter arboriphilus
      16S Identity %
      92.06349206349206
      POCPu
      42.039397450753185
      G+C Difference (%)
      15.959999999999997
      0 references
      Methanothermobacter wolfei
      16S Identity %
      92.00833912439194
      0 references
      Methanothermobacter thermophilus
      16S Identity %
      91.87105816398038
      0 references
      Methanothermobacter thermoflexus
      16S Identity %
      91.79310344827586
      0 references
      Methanothermobacter defluvii
      16S Identity %
      91.3588850174216
      0 references
      Methanobrevibacter curvatus
      16S Identity %
      91.24356144223694
      POCPu
      34.13228854574787
      G+C Difference (%)
      15.68
      0 references
      Methanobrevibacter olleyae
      16S Identity %
      91.03885804916733
      POCPu
      35.28987250420977
      G+C Difference (%)
      14.599999999999998
      0 references
      Methanobrevibacter acididurans
      16S Identity %
      90.8685968819599
      0 references
      Methanothermobacter tenebrarum
      16S Identity %
      90.8315565031983
      POCPu
      52.04311857608423
      G+C Difference (%)
      0.6499999999999986
      0 references
      Methanobrevibacter ruminantium
      16S Identity %
      90.80779944289694
      POCPu
      32.19448094612352
      G+C Difference (%)
      8.759999999999998
      0 references
      Methanothermobacter crinale
      16S Identity %
      90.71379071379071
      0 references
      Methanobrevibacter cuticularis
      16S Identity %
      90.55597867479057
      POCPu
      39.05685920577617
      G+C Difference (%)
      14.61
      0 references
      Methanobrevibacter smithii
      16S Identity %
      90.4211956521739
      POCPu
      35.95370147094285
      G+C Difference (%)
      10.369999999999997
      0 references
      Methanobrevibacter millerae
      16S Identity %
      90.31746031746032
      POCPu
      30.59543918918919
      G+C Difference (%)
      4.979999999999997
      0 references
      Methanobrevibacter boviskoreani
      16S Identity %
      90.2439024390244
      POCPu
      36.232943469785575
      G+C Difference (%)
      12.419999999999998
      0 references
      Methanobrevibacter filiformis
      16S Identity %
      90.22058823529412
      POCPu
      36.840882694541236
      G+C Difference (%)
      14.41
      0 references
      Methanobacterium thermaggregans
      16S Identity %
      89.80309423347398
      0 references
      Methanosphaera stadtmanae
      16S Identity %
      89.80285520054385
      POCPu
      34.243429446287315
      G+C Difference (%)
      13.77
      0 references
      Methanobrevibacter woesei
      16S Identity %
      89.79744936234059
      POCPu
      38.085591288933905
      G+C Difference (%)
      11.5
      0 references
      Methanosphaera cuniculi
      16S Identity %
      89.60597826086956
      POCPu
      30.718623481781375
      G+C Difference (%)
      13.32
      0 references
      Methanobrevibacter wolinii
      16S Identity %
      89.36950146627566
      POCPu
      36.13714849531327
      G+C Difference (%)
      17.229999999999997
      0 references
      Methanobrevibacter gottschalkii
      16S Identity %
      88.88888888888889
      POCPu
      33.5787223937307
      G+C Difference (%)
      11.379999999999999
      0 references
      Methanobrevibacter thaueri
      16S Identity %
      88.62559241706161
      POCPu
      31.32904370978478
      G+C Difference (%)
      4.530000000000001
      0 references
      Methanothermus fervidus
      16S Identity %
      86.61684782608695
      POCPu
      42.41519674355495
      G+C Difference (%)
      9.759999999999998
      0 references
      Methanothermus sociabilis
      16S Identity %
      86.08458390177354
      0 references
      Methanothermobacter wolfeii
      POCPu
      51.64965582720152
      G+C Difference (%)
      7.270000000000003
      0 references
      CAZyme
      GH13
      Occurance
      1
      0 references
      GH0
      Occurance
      3
      0 references
      GH19
      Occurance
      1
      0 references
      GT13
      Occurance
      1
      0 references
      GT2
      Occurance
      32
      0 references
      GT66
      Occurance
      2
      0 references
      GT1
      Occurance
      5
      0 references
      GT81
      Occurance
      1
      0 references
      GT4
      Occurance
      23
      0 references
      GT0
      Occurance
      2
      0 references
      GT61
      Occurance
      1
      0 references
      GT60
      Occurance
      1
      0 references
      GT28
      Occurance
      1
      0 references
      CE9
      Occurance
      1
      0 references
      CE14
      Occurance
      4
      0 references
      CE4
      Occurance
      1
      0 references
      CBM50
      Occurance
      10
      0 references
      CBM2
      Occurance
      1
      0 references
      CBM5
      Occurance
      1
      0 references
      CBM48
      Occurance
      1
      0 references
      Pathway
      Ecosystem
       
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