Jump to content

GCF_001316245.1 (Q252195): Difference between revisions

From wikibase
‎Changed an Item
‎Changed an Item
 
(4 intermediate revisions by the same user not shown)
Property / Carbon source
 
Property / Carbon source: starch / rank
 
Normal rank
Property / CAZyme
 
Property / CAZyme: GH15 / rank
 
Normal rank
Property / CAZyme: GH15 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: GH57 / rank
 
Normal rank
Property / CAZyme: GH57 / qualifier
 
Occurance: 5
Amount5
Unit1
Property / CAZyme
 
Property / CAZyme: GH36 / rank
 
Normal rank
Property / CAZyme: GH36 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH135 / rank
 
Normal rank
Property / CAZyme: GH135 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH1 / rank
 
Normal rank
Property / CAZyme: GH1 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH38 / rank
 
Normal rank
Property / CAZyme: GH38 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT7 / rank
 
Normal rank
Property / CAZyme: GT7 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 13
Amount13
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 8
Amount8
Unit1
Property / CAZyme
 
Property / CAZyme: GT21 / rank
 
Normal rank
Property / CAZyme: GT21 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT35 / rank
 
Normal rank
Property / CAZyme: GT35 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE14 / rank
 
Normal rank
Property / CAZyme: CE14 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank
 
Normal rank
Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier
 
Property / Pathway
 
Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / rank
 
Normal rank
Property / Pathway: Gluconeogenesis, oxaloacetate => fructose-6P / qualifier
 
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Acylglycerol degradation / rank
 
Normal rank
Property / Pathway: Acylglycerol degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Heme biosynthesis, archaea, siroheme => heme / rank
 
Normal rank
Property / Pathway: Heme biosynthesis, archaea, siroheme => heme / qualifier
 
Property / Pathway
 
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank
 
Normal rank
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Methionine degradation I / rank
 
Normal rank
Property / Pathway: Methionine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA to crotonyl-CoA / rank
 
Normal rank
Property / Pathway: Acetyl-CoA to crotonyl-CoA / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 15:15, 25 September 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCF_001316245.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      99.07038512616202
      76.51784334929708
      81.241
      1.2999999999999972
      0 references
      98.30047586675731
      72.29575536284801
      78.95
      1.5999999999999943
      0 references
      98.25540823447312
      60.35249547026849
      77.2545
      2.3500000000000014
      0 references
      94.02061855670102
      33.26086956521739
      3.6299999999999955
      0 references
      0 references
      93.89261744966443
      20.679886685552407
      10.240000000000002
      0 references
      0 references
      93.72077488309954
      23.677623894543633
      8.400000000000006
      0 references
      93.62843729040911
      20.778172424927348
      10.420000000000002
      0 references
      0 references
      93.21692411014104
      19.83540476990259
      0 references
      93.10109289617486
      20.555149744338934
      0 references
      91.9753086419753
      26.453488372093027
      6.410000000000004
      0 references
      91.68937329700273
      20.23359105115973
      2.8700000000000045
      0 references
      90.91603053435115
      8.881521549467806
      7.010000000000005
      0 references
      0 references
      90.55283414975507
      8.524471735596894
      0 references
      90.49865229110512
      8.661825726141078
      0.21999999999999886
      0 references
      90.24882313382649
      9.187521426122728
      10.920000000000002
      0 references
      90.18817204301075
      7.663410969196092
      8.910000000000004
      0 references
      90.07328447701532
      7.478825013515948
      9.889999999999993
      0 references
      89.9859943977591
      8.450453655933108
      9.580000000000005
      0 references
      89.92612491605104
      7.877813504823152
      1.2100000000000009
      0 references
      89.77807666442501
      10.118194842406877
      16.770000000000003
      0 references
      89.75265017667844
      7.195845697329377
      9.790000000000006
      0 references
      89.72099853157121
      9.46287253746422
      8.170000000000002
      0 references
      89.52316991269308
      9.252787485438509
      0 references
      89.29765886287625
      8.968985750209555
      2.6300000000000026
      0 references
      89.24008069939475
      6.995110943963896
      0 references
      89.20754716981132
      7.453950766052676
      1.4500000000000028
      0 references
      0 references
      0 references
      88.75420875420875
      9.217214503558116
      0 references
      88.35800807537012
      7.149630191541817
      6.410000000000004
      0 references
      88.08080808080808
      10.506844247132815
      10.490000000000002
      0 references
      87.99185888738128
      7.321225879682179
      1.5700000000000003
      0 references
      0 references
      87.26027397260275
      7.398568019093078
      1.8299999999999983
      0 references
      0 references
      86.22795115332428
      13.062751073555894
      13.829999999999998
      0 references
      86.0385144429161
      11.191677175283733
      12.369999999999997
      0 references
      85.69463548830811
      11.726981218506642
      0 references
      85.66621803499326
      12.579617834394904
      13.939999999999998
      0 references
      85.58922558922559
      12.375881421787307
      13.979999999999997
      0 references
      85.37894030851777
      7.133346014837359
      9.259999999999998
      0 references
      85.26816021724372
      12.283323371189478
      15.049999999999997
      0 references
      0 references
      85.00336247478144
      12.238256932654217
      11.369999999999997
      0 references
      84.94260634706279
      10.890945906855656
      6.589999999999996
      0 references
      84.93611297915265
      11.927494119274941
      10.889999999999993
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references