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GCF_900215215.1 (Q239482): Difference between revisions

From wikibase
‎Added qualifier: POCPu (P4): 39.77035490605428
‎Added qualifier: Ecosystem (P27): Generic (Q43559)
 
(336 intermediate revisions by the same user not shown)
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
G+C Difference (%): 2.4099999999999966
Amount2.4099999999999966
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum zhilinae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
16S Identity %: 24.947589098532493
Amount24.947589098532493
Unit1
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
POCPu: 55.18692745729141
Amount55.18692745729141
Unit1
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
G+C Difference (%): 2.960000000000001
Amount2.960000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina thermophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina thermophila / qualifier
 
16S Identity %: 24.91252624212736
Amount24.91252624212736
Unit1
Property / Comparison to close relatives: Methanosarcina thermophila / qualifier
 
POCPu: 46.22062248570823
Amount46.22062248570823
Unit1
Property / Comparison to close relatives: Methanosarcina thermophila / qualifier
 
G+C Difference (%): 0.9699999999999989
Amount0.9699999999999989
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina lacustris / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina lacustris / qualifier
 
16S Identity %: 24.90974729241877
Amount24.90974729241877
Unit1
Property / Comparison to close relatives: Methanosarcina lacustris / qualifier
 
POCPu: 43.60518153621602
Amount43.60518153621602
Unit1
Property / Comparison to close relatives: Methanosarcina lacustris / qualifier
 
G+C Difference (%): 0.29999999999999716
Amount0.29999999999999716
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina soligelidi / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina soligelidi / qualifier
 
16S Identity %: 24.832214765100673
Amount24.832214765100673
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix harundinacea / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
16S Identity %: 24.797047970479706
Amount24.797047970479706
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
POCPu: 25.39467749210645
Amount25.39467749210645
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
G+C Difference (%): 13.380000000000003
Amount13.380000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina spelaei / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina spelaei / qualifier
 
16S Identity %: 24.74074074074074
Amount24.74074074074074
Unit1
Property / Comparison to close relatives: Methanosarcina spelaei / qualifier
 
POCPu: 36.84210526315789
Amount36.84210526315789
Unit1
Property / Comparison to close relatives: Methanosarcina spelaei / qualifier
 
G+C Difference (%): 3.3699999999999974
Amount3.3699999999999974
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocella arvoryzae / rank
 
Normal rank
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
16S Identity %: 24.576844955991874
Amount24.576844955991874
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
POCPu: 17.995710664846946
Amount17.995710664846946
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
G+C Difference (%): 12.480000000000004
Amount12.480000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides alaskense / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
16S Identity %: 24.526928675400292
Amount24.526928675400292
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
POCPu: 59.453924914675774
Amount59.453924914675774
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
G+C Difference (%): 0.4299999999999997
Amount0.4299999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosphaerula palustris / rank
 
Normal rank
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
16S Identity %: 24.38692098092643
Amount24.38692098092643
Unit1
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
POCPu: 14.151534126487164
Amount14.151534126487164
Unit1
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
G+C Difference (%): 13.230000000000004
Amount13.230000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus mahii / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
16S Identity %: 24.34077079107505
Amount24.34077079107505
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
POCPu: 83.39547601292567
Amount83.39547601292567
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
ANI %: 91.0866
Amount91.0866
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
G+C Difference (%): 0.5
Amount0.5
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus sediminis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
16S Identity %: 24.15426251691475
Amount24.15426251691475
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
POCPu: 52.116570942352695
Amount52.116570942352695
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
G+C Difference (%): 1.1799999999999997
Amount1.1799999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus mangrovi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
16S Identity %: 24.07031778228533
Amount24.07031778228533
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
POCPu: 54.724496570037616
Amount54.724496570037616
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
G+C Difference (%): 0.509999999999998
Amount0.509999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus marisnigri / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
16S Identity %: 24.065261726716518
Amount24.065261726716518
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
POCPu: 16.3365234809704
Amount16.3365234809704
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
G+C Difference (%): 19.940000000000005
Amount19.940000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus oregonensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus oregonensis / qualifier
 
16S Identity %: 24
Amount24
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina acetivorans / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina acetivorans / qualifier
 
16S Identity %: 23.969252271139062
Amount23.969252271139062
Unit1
Property / Comparison to close relatives: Methanosarcina acetivorans / qualifier
 
POCPu: 36.006380510440835
Amount36.006380510440835
Unit1
Property / Comparison to close relatives: Methanosarcina acetivorans / qualifier
 
G+C Difference (%): 0.5600000000000023
Amount0.5600000000000023
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina mazei / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina mazei / qualifier
 
16S Identity %: 23.952095808383234
Amount23.952095808383234
Unit1
Property / Comparison to close relatives: Methanosarcina mazei / qualifier
 
POCPu: 41.93895870736086
Amount41.93895870736086
Unit1
Property / Comparison to close relatives: Methanosarcina mazei / qualifier
 
G+C Difference (%): 0.6999999999999957
Amount0.6999999999999957
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus taylorii / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus taylorii / qualifier
 
16S Identity %: 23.876404494382022
Amount23.876404494382022
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalobium evestigatum / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
16S Identity %: 23.861318830727395
Amount23.861318830727395
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
POCPu: 52.377717391304344
Amount52.377717391304344
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
G+C Difference (%): 5.699999999999996
Amount5.699999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolacinia petrolearia / rank
 
Normal rank
Property / Comparison to close relatives: Methanolacinia petrolearia / qualifier
 
16S Identity %: 23.845108695652172
Amount23.845108695652172
Unit1
Property / Comparison to close relatives: Methanolacinia petrolearia / qualifier
 
POCPu: 14.400993171942892
Amount14.400993171942892
Unit1
Property / Comparison to close relatives: Methanolacinia petrolearia / qualifier
 
G+C Difference (%): 5.280000000000001
Amount5.280000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus chelungpuianus / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
16S Identity %: 23.84206529992407
Amount23.84206529992407
Unit1
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
POCPu: 53.05267798104474
Amount53.05267798104474
Unit1
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
G+C Difference (%): 6.030000000000001
Amount6.030000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanimicrococcus blatticola / rank
 
Normal rank
Property / Comparison to close relatives: Methanimicrococcus blatticola / qualifier
 
16S Identity %: 23.812801101169992
Amount23.812801101169992
Unit1
Property / Comparison to close relatives: Methanimicrococcus blatticola / qualifier
 
POCPu: 32.062780269058294
Amount32.062780269058294
Unit1
Property / Comparison to close relatives: Methanimicrococcus blatticola / qualifier
 
G+C Difference (%): 0.14000000000000057
Amount0.14000000000000057
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus halotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
16S Identity %: 23.79603399433428
Amount23.79603399433428
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
POCPu: 53.994309476909606
Amount53.994309476909606
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
G+C Difference (%): 1.4600000000000009
Amount1.4600000000000009
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix thermoacetophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
16S Identity %: 23.764387271496275
Amount23.764387271496275
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
POCPu: 26.033490319204606
Amount26.033490319204606
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
G+C Difference (%): 11.43
Amount11.43
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoplanus endosymbiosus / rank
 
Normal rank
Property / Comparison to close relatives: Methanoplanus endosymbiosus / qualifier
 
16S Identity %: 23.589394969408566
Amount23.589394969408566
Unit1
Property / Comparison to close relatives: Methanoplanus endosymbiosus / qualifier
 
POCPu: 13.986874487284659
Amount13.986874487284659
Unit1
Property / Comparison to close relatives: Methanoplanus endosymbiosus / qualifier
 
G+C Difference (%): 0.1600000000000037
Amount0.1600000000000037
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus portucalensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus portucalensis / qualifier
 
16S Identity %: 23.500410846343467
Amount23.500410846343467
Unit1
Property / Comparison to close relatives: Methanohalophilus portucalensis / qualifier
 
POCPu: 82.78708424374848
Amount82.78708424374848
Unit1
Property / Comparison to close relatives: Methanohalophilus portucalensis / qualifier
 
ANI %: 93.5207
Amount93.5207
Unit1
Property / Comparison to close relatives: Methanohalophilus portucalensis / qualifier
 
G+C Difference (%): 0.17999999999999972
Amount0.17999999999999972
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus zinderi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
16S Identity %: 23.493568043331077
Amount23.493568043331077
Unit1
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
POCPu: 54.99892956540356
Amount54.99892956540356
Unit1
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
G+C Difference (%): 1.9400000000000048
Amount1.9400000000000048
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus profundi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
16S Identity %: 23.47517730496454
Amount23.47517730496454
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
POCPu: 50.812677773262905
Amount50.812677773262905
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
G+C Difference (%): 0.45000000000000284
Amount0.45000000000000284
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina baltica / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina baltica / qualifier
 
16S Identity %: 23.44931921331316
Amount23.44931921331316
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus psychrotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
16S Identity %: 23.387668320340186
Amount23.387668320340186
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
POCPu: 50.72144288577154
Amount50.72144288577154
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
G+C Difference (%): 0.7899999999999991
Amount0.7899999999999991
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans uponensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans uponensis / qualifier
 
16S Identity %: 23.38593974175036
Amount23.38593974175036
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methermicoccus shengliensis / rank
 
Normal rank
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
16S Identity %: 23.3060312732688
Amount23.3060312732688
Unit1
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
POCPu: 26.200993926007733
Amount26.200993926007733
Unit1
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
G+C Difference (%): 12.450000000000003
Amount12.450000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum natronophilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
16S Identity %: 23.294279807029636
Amount23.294279807029636
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
POCPu: 49.648417880462084
Amount49.648417880462084
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
G+C Difference (%): 7.779999999999994
Amount7.779999999999994
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina semesiae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina semesiae / qualifier
 
16S Identity %: 23.282967032967033
Amount23.282967032967033
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus levihalophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
16S Identity %: 23.25581395348837
Amount23.25581395348837
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
POCPu: 65.00590318772137
Amount65.00590318772137
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
G+C Difference (%): 0.4000000000000057
Amount0.4000000000000057
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus vulcani / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
16S Identity %: 23.103932584269664
Amount23.103932584269664
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
POCPu: 52.45867336262816
Amount52.45867336262816
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
G+C Difference (%): 1.9199999999999946
Amount1.9199999999999946
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans hollandica / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
16S Identity %: 23.008241758241756
Amount23.008241758241756
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
POCPu: 52.721015272101525
Amount52.721015272101525
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
G+C Difference (%): 0.25
Amount0.25
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus halophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
16S Identity %: 22.930800542740844
Amount22.930800542740844
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
POCPu: 81.7037037037037
Amount81.7037037037037
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
ANI %: 92.1028
Amount92.1028
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
G+C Difference (%): 0.28000000000000114
Amount0.28000000000000114
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus tindarius / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus tindarius / qualifier
 
16S Identity %: 22.845129642606867
Amount22.845129642606867
Unit1
Property / Comparison to close relatives: Methanolobus tindarius / qualifier
 
POCPu: 49.67780910189287
Amount49.67780910189287
Unit1
Property / Comparison to close relatives: Methanolobus tindarius / qualifier
 
G+C Difference (%): 2.3299999999999983
Amount2.3299999999999983
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus bombayensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
16S Identity %: 22.831978319783197
Amount22.831978319783197
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
POCPu: 52.696329710887845
Amount52.696329710887845
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
G+C Difference (%): 2.3999999999999986
Amount2.3999999999999986
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans thermophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans thermophila / qualifier
 
16S Identity %: 22.684172137126186
Amount22.684172137126186
Unit1
Property / CAZyme
 
Property / CAZyme: GH6 / rank
 
Normal rank
Property / CAZyme: GH6 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH15 / rank
 
Normal rank
Property / CAZyme: GH15 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH105 / rank
 
Normal rank
Property / CAZyme: GH105 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: GH43 / rank
 
Normal rank
Property / CAZyme: GH43 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT13 / rank
 
Normal rank
Property / CAZyme: GT13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 15
Amount15
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 13
Amount13
Unit1
Property / CAZyme
 
Property / CAZyme: GT22 / rank
 
Normal rank
Property / CAZyme: GT22 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT0 / rank
 
Normal rank
Property / CAZyme: GT0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT81 / rank
 
Normal rank
Property / CAZyme: GT81 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT55 / rank
 
Normal rank
Property / CAZyme: GT55 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 6
Amount6
Unit1
Property / Pathway
 
Property / Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate / rank
 
Normal rank
Property / Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate / qualifier
 
Property / Pathway
 
Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank
 
Normal rank
Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier
 
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Proline biosynthesis, glutamate => proline / rank
 
Normal rank
Property / Pathway: Proline biosynthesis, glutamate => proline / qualifier
 
Property / Pathway
 
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank
 
Normal rank
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: V/A-type ATPase, prokaryotes / rank
 
Normal rank
Property / Pathway: V/A-type ATPase, prokaryotes / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: C10-C20 isoprenoid biosynthesis, bacteria / rank
 
Normal rank
Property / Pathway: C10-C20 isoprenoid biosynthesis, bacteria / qualifier
 
Property / Pathway
 
Property / Pathway: C10-C20 isoprenoid biosynthesis, archaea / rank
 
Normal rank
Property / Pathway: C10-C20 isoprenoid biosynthesis, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: F420 biosynthesis, archaea / rank
 
Normal rank
Property / Pathway: F420 biosynthesis, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme F430 biosynthesis, sirohydrochlorin => coenzyme F430 / rank
 
Normal rank
Property / Pathway: Coenzyme F430 biosynthesis, sirohydrochlorin => coenzyme F430 / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Heme biosynthesis, archaea, siroheme => heme / rank
 
Normal rank
Property / Pathway: Heme biosynthesis, archaea, siroheme => heme / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine salvage pathway, HMP/HET => TMP / rank
 
Normal rank
Property / Pathway: Thiamine salvage pathway, HMP/HET => TMP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank
 
Normal rank
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / rank
 
Normal rank
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / rank
 
Normal rank
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank
 
Normal rank
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, methanol => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, methanol => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, methylamine/dimethylamine/trimethylamine => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, methylamine/dimethylamine/trimethylamine => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, CO2 => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, CO2 => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, acetate => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, acetate => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Alanine degradation II / rank
 
Normal rank
Property / Pathway: Alanine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamine degradation II / rank
 
Normal rank
Property / Pathway: Glutamine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Methanol conversion / rank
 
Normal rank
Property / Pathway: Methanol conversion / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis from carbon dioxide / rank
 
Normal rank
Property / Pathway: Methanogenesis from carbon dioxide / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 1.7
Amount1.7
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 1.2
Amount1.2
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0.6
Amount0.6
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.98
Amount0.98
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 7.7
Amount7.7
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.31
Amount0.31
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: 3300017919_2.fna / rank
 
Normal rank
Property / MAGs: 3300017919_2.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300017920_3.fna / rank
 
Normal rank
Property / MAGs: 3300017920_3.fna / qualifier
 

Latest revision as of 18:59, 23 September 2026

genome assembly
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    English
    GCF_900215215.1
    genome assembly

      Statements

      no current description - please contribute here
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