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GCF_023169545.1 (Q222617): Difference between revisions

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Added qualifier: G+C Difference (%) (P22): 17.229999999999997
 
(134 intermediate revisions by the same user not shown)
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans thermophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans thermophila / qualifier
 
16S Identity %: 69.55555555555556
Amount69.55555555555556
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides burtonii / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides burtonii / qualifier
 
16S Identity %: 69.04598490048043
Amount69.04598490048043
Unit1
Property / Comparison to close relatives: Methanococcoides burtonii / qualifier
 
POCPu: 0.5705705705705706
Amount0.5705705705705706
Unit1
Property / Comparison to close relatives: Methanococcoides burtonii / qualifier
 
G+C Difference (%): 16.119999999999997
Amount16.119999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermoplasma acidophilum / rank
 
Normal rank
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
16S Identity %: 68.93470790378007
Amount68.93470790378007
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
POCPu: 1.1378555798687089
Amount1.1378555798687089
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
G+C Difference (%): 21.35
Amount21.35
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum natronophilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
16S Identity %: 68.75434933890048
Amount68.75434933890048
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
POCPu: 0.409683426443203
Amount0.409683426443203
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
G+C Difference (%): 9.700000000000003
Amount9.700000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus mahii / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
16S Identity %: 68.75
Amount68.75
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
POCPu: 0.4035216434336023
Amount0.4035216434336023
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
G+C Difference (%): 17.979999999999997
Amount17.979999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides orientis / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
16S Identity %: 68.70281400137269
Amount68.70281400137269
Unit1
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
POCPu: 0.6180871828236825
Amount0.6180871828236825
Unit1
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
G+C Difference (%): 18.04
Amount18.04
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides methylutens / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
16S Identity %: 68.68547832071576
Amount68.68547832071576
Unit1
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
POCPu: 0.4725897920604915
Amount0.4725897920604915
Unit1
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
G+C Difference (%): 17.86
Amount17.86
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix harundinacea / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
16S Identity %: 68.67559523809523
Amount68.67559523809523
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
POCPu: 0.637551801083838
Amount0.637551801083838
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
G+C Difference (%): 30.86
Amount30.86
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans uponensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans uponensis / qualifier
 
16S Identity %: 68.55072463768116
Amount68.55072463768116
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum zhilinae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
16S Identity %: 68.4322033898305
Amount68.4322033898305
Unit1
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
POCPu: 0.5835156819839533
Amount0.5835156819839533
Unit1
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
G+C Difference (%): 14.519999999999996
Amount14.519999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus levihalophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
16S Identity %: 68.15847395451212
Amount68.15847395451212
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
POCPu: 0.4084411164057182
Amount0.4084411164057182
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
G+C Difference (%): 17.880000000000003
Amount17.880000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina subterranea / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina subterranea / qualifier
 
16S Identity %: 67.89951151430566
Amount67.89951151430566
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina semesiae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina semesiae / qualifier
 
16S Identity %: 67.57512229210343
Amount67.57512229210343
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina lacustris / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina lacustris / qualifier
 
16S Identity %: 67.05454545454546
Amount67.05454545454546
Unit1
Property / Comparison to close relatives: Methanosarcina lacustris / qualifier
 
POCPu: 0.3824091778202677
Amount0.3824091778202677
Unit1
Property / Comparison to close relatives: Methanosarcina lacustris / qualifier
 
G+C Difference (%): 17.18
Amount17.18
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina baltica / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina baltica / qualifier
 
16S Identity %: 66.86976389946688
Amount66.86976389946688
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Microcaldus variisymbioticus / rank
 
Normal rank
Property / Comparison to close relatives: Microcaldus variisymbioticus / qualifier
 
16S Identity %: 65.90457256461232
Amount65.90457256461232
Unit1
Property / Carbon source
 
Property / Carbon source: starch / rank
 
Normal rank
Property / CAZyme
 
Property / CAZyme: GH57 / rank
 
Normal rank
Property / CAZyme: GH57 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH1 / rank
 
Normal rank
Property / CAZyme: GH1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT13 / rank
 
Normal rank
Property / CAZyme: GT13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT3 / rank
 
Normal rank
Property / CAZyme: GT3 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 6
Amount6
Unit1
Property / CAZyme
 
Property / CAZyme: GT35 / rank
 
Normal rank
Property / CAZyme: GT35 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: GT0 / rank
 
Normal rank
Property / CAZyme: GT0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 01:52, 23 August 2026

genome assembly
Language Label Description Also known as
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No label defined
    English
    GCF_023169545.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      0 references
      0.8924776880577986
      15.280000000000001
      0 references
      69.5591322603219
      0.47732696897374705
      17.229999999999997
      0 references
      0 references
      69.04598490048043
      0.5705705705705706
      16.119999999999997
      0 references
      68.93470790378007
      1.1378555798687089
      0 references
      68.75434933890048
      0.409683426443203
      9.700000000000003
      0 references
      0.4035216434336023
      17.979999999999997
      0 references
      68.70281400137269
      0.6180871828236825
      0 references
      68.68547832071576
      0.4725897920604915
      0 references
      68.67559523809523
      0.637551801083838
      0 references
      0 references
      68.4322033898305
      0.5835156819839533
      14.519999999999996
      0 references
      68.15847395451212
      0.4084411164057182
      17.880000000000003
      0 references
      0 references
      0 references
      67.05454545454546
      0.3824091778202677
      0 references
      0 references
      0 references
      0 references
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