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GCA_029219465.1 (Q203174): Difference between revisions

From wikibase
Added qualifier: 16S Identity % (P3): 26.87224669603524
Added qualifier: Ecosystem (P27): Pig (Q65928)
 
(318 intermediate revisions by the same user not shown)
Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier
 
POCPu: 44.130434782608695
Amount44.130434782608695
Unit1
Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier
 
G+C Difference (%): 4.040000000000003
Amount4.040000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter boviskoreani / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter boviskoreani / qualifier
 
16S Identity %: 26.472898664571876
Amount26.472898664571876
Unit1
Property / Comparison to close relatives: Methanobrevibacter boviskoreani / qualifier
 
POCPu: 56.07933314170739
Amount56.07933314170739
Unit1
Property / Comparison to close relatives: Methanobrevibacter boviskoreani / qualifier
 
G+C Difference (%): 2.0500000000000007
Amount2.0500000000000007
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter smithii / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier
 
16S Identity %: 26.372881355932204
Amount26.372881355932204
Unit1
Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier
 
POCPu: 69.93185689948893
Amount69.93185689948893
Unit1
Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier
 
ANI %: 79.5957
Amount79.5957
Unit1
Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier
 
G+C Difference (%): 0
Amount0
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium spitsbergense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium spitsbergense / qualifier
 
16S Identity %: 26.350789692435576
Amount26.350789692435576
Unit1
Property / Comparison to close relatives: Methanobacterium spitsbergense / qualifier
 
POCPu: 31.211180124223603
Amount31.211180124223603
Unit1
Property / Comparison to close relatives: Methanobacterium spitsbergense / qualifier
 
G+C Difference (%): 1.490000000000002
Amount1.490000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter thaueri / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter thaueri / qualifier
 
16S Identity %: 26.34069400630915
Amount26.34069400630915
Unit1
Property / Comparison to close relatives: Methanobrevibacter thaueri / qualifier
 
POCPu: 74.16280267903143
Amount74.16280267903143
Unit1
Property / Comparison to close relatives: Methanobrevibacter thaueri / qualifier
 
ANI %: 80.7292
Amount80.7292
Unit1
Property / Comparison to close relatives: Methanobrevibacter thaueri / qualifier
 
G+C Difference (%): 5.839999999999996
Amount5.839999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter olleyae / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier
 
16S Identity %: 26.32831086439334
Amount26.32831086439334
Unit1
Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier
 
POCPu: 58.63533408833522
Amount58.63533408833522
Unit1
Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier
 
ANI %: 77.6227
Amount77.6227
Unit1
Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier
 
G+C Difference (%): 4.23
Amount4.23
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermus fervidus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermus fervidus / qualifier
 
16S Identity %: 26.255088195386705
Amount26.255088195386705
Unit1
Property / Comparison to close relatives: Methanothermus fervidus / qualifier
 
POCPu: 35.45751633986928
Amount35.45751633986928
Unit1
Property / Comparison to close relatives: Methanothermus fervidus / qualifier
 
G+C Difference (%): 0.6099999999999994
Amount0.6099999999999994
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosphaera stadtmanae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier
 
16S Identity %: 26.222826086956523
Amount26.222826086956523
Unit1
Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier
 
POCPu: 36.15664845173042
Amount36.15664845173042
Unit1
Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier
 
G+C Difference (%): 3.400000000000002
Amount3.400000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium formicicum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium formicicum / qualifier
 
16S Identity %: 26.055312954876275
Amount26.055312954876275
Unit1
Property / Comparison to close relatives: Methanobacterium formicicum / qualifier
 
POCPu: 33.76969696969697
Amount33.76969696969697
Unit1
Property / Comparison to close relatives: Methanobacterium formicicum / qualifier
 
G+C Difference (%): 10.339999999999996
Amount10.339999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium petrolearium / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier
 
16S Identity %: 25.971223021582734
Amount25.971223021582734
Unit1
Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier
 
POCPu: 34.049829018075236
Amount34.049829018075236
Unit1
Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier
 
G+C Difference (%): 6.740000000000002
Amount6.740000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter gottschalkii / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter gottschalkii / qualifier
 
16S Identity %: 25.962264150943398
Amount25.962264150943398
Unit1
Property / Comparison to close relatives: Methanobrevibacter gottschalkii / qualifier
 
POCPu: 80.00557724484105
Amount80.00557724484105
Unit1
Property / Comparison to close relatives: Methanobrevibacter gottschalkii / qualifier
 
ANI %: 84.1957
Amount84.1957
Unit1
Property / Comparison to close relatives: Methanobrevibacter gottschalkii / qualifier
 
G+C Difference (%): 1.0100000000000016
Amount1.0100000000000016
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium lacus / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium lacus / qualifier
 
16S Identity %: 25.928677563150078
Amount25.928677563150078
Unit1
Property / Comparison to close relatives: Methanobacterium lacus / qualifier
 
POCPu: 32.6219512195122
Amount32.6219512195122
Unit1
Property / Comparison to close relatives: Methanobacterium lacus / qualifier
 
G+C Difference (%): 4.799999999999997
Amount4.799999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter millerae / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter millerae / qualifier
 
16S Identity %: 25.91125198098257
Amount25.91125198098257
Unit1
Property / Comparison to close relatives: Methanobrevibacter millerae / qualifier
 
POCPu: 65.312576015568
Amount65.312576015568
Unit1
Property / Comparison to close relatives: Methanobrevibacter millerae / qualifier
 
ANI %: 79.4181
Amount79.4181
Unit1
Property / Comparison to close relatives: Methanobrevibacter millerae / qualifier
 
G+C Difference (%): 5.390000000000001
Amount5.390000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium movilense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium movilense / qualifier
 
16S Identity %: 25.909428359316998
Amount25.909428359316998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium alcaliphilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
16S Identity %: 25.56657223796034
Amount25.56657223796034
Unit1
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
POCPu: 39.15945611866502
Amount39.15945611866502
Unit1
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
G+C Difference (%): 2.3699999999999974
Amount2.3699999999999974
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium bryantii / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium bryantii / qualifier
 
16S Identity %: 25.555555555555554
Amount25.555555555555554
Unit1
Property / Comparison to close relatives: Methanobacterium bryantii / qualifier
 
POCPu: 30.620308178585535
Amount30.620308178585535
Unit1
Property / Comparison to close relatives: Methanobacterium bryantii / qualifier
 
G+C Difference (%): 2.1599999999999966
Amount2.1599999999999966
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium veterum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium veterum / qualifier
 
16S Identity %: 25.50185873605948
Amount25.50185873605948
Unit1
Property / Comparison to close relatives: Methanobacterium veterum / qualifier
 
POCPu: 30.64516129032258
Amount30.64516129032258
Unit1
Property / Comparison to close relatives: Methanobacterium veterum / qualifier
 
G+C Difference (%): 2.1400000000000006
Amount2.1400000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium aarhusense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium aarhusense / qualifier
 
16S Identity %: 25.431357839459867
Amount25.431357839459867
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium ferruginis / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier
 
16S Identity %: 25.391180654338548
Amount25.391180654338548
Unit1
Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier
 
POCPu: 31.542906056066766
Amount31.542906056066766
Unit1
Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier
 
G+C Difference (%): 6.359999999999999
Amount6.359999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium oryzae / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium oryzae / qualifier
 
16S Identity %: 25.277008310249304
Amount25.277008310249304
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium movens / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium movens / qualifier
 
16S Identity %: 25.24339360222531
Amount25.24339360222531
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter curvatus / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier
 
16S Identity %: 25.239146431199412
Amount25.239146431199412
Unit1
Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier
 
POCPu: 42.703284868066774
Amount42.703284868066774
Unit1
Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier
 
G+C Difference (%): 5.310000000000002
Amount5.310000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium ivanovii / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium ivanovii / qualifier
 
16S Identity %: 25.229681978798585
Amount25.229681978798585
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter thermoflexus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter thermoflexus / qualifier
 
16S Identity %: 25.206611570247933
Amount25.206611570247933
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium subterraneum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier
 
16S Identity %: 25.174825174825177
Amount25.174825174825177
Unit1
Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier
 
POCPu: 33.133971291866025
Amount33.133971291866025
Unit1
Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier
 
G+C Difference (%): 8.369999999999997
Amount8.369999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter wolinii / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter wolinii / qualifier
 
16S Identity %: 25.146627565982406
Amount25.146627565982406
Unit1
Property / Comparison to close relatives: Methanobrevibacter wolinii / qualifier
 
POCPu: 57.24701079031787
Amount57.24701079031787
Unit1
Property / Comparison to close relatives: Methanobrevibacter wolinii / qualifier
 
ANI %: 77.241
Amount77.241
Unit1
Property / Comparison to close relatives: Methanobrevibacter wolinii / qualifier
 
G+C Difference (%): 6.859999999999999
Amount6.859999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter acididurans / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter acididurans / qualifier
 
16S Identity %: 25.11111111111111
Amount25.11111111111111
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter ruminantium / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier
 
16S Identity %: 25.069637883008355
Amount25.069637883008355
Unit1
Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier
 
POCPu: 52.93072824156305
Amount52.93072824156305
Unit1
Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier
 
G+C Difference (%): 1.6099999999999994
Amount1.6099999999999994
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter woesei / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier
 
16S Identity %: 25.056264066016503
Amount25.056264066016503
Unit1
Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier
 
POCPu: 69.13357400722022
Amount69.13357400722022
Unit1
Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier
 
ANI %: 79.3118
Amount79.3118
Unit1
Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier
 
G+C Difference (%): 1.1300000000000026
Amount1.1300000000000026
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter defluvii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter defluvii / qualifier
 
16S Identity %: 24.738675958188153
Amount24.738675958188153
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium kanagiense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium kanagiense / qualifier
 
16S Identity %: 24.6922024623803
Amount24.6922024623803
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermus sociabilis / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermus sociabilis / qualifier
 
16S Identity %: 24.300341296928327
Amount24.300341296928327
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium paludis / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium paludis / qualifier
 
16S Identity %: 23.964697895451458
Amount23.964697895451458
Unit1
Property / Comparison to close relatives: Methanobacterium paludis / qualifier
 
POCPu: 33.86596708800382
Amount33.86596708800382
Unit1
Property / Comparison to close relatives: Methanobacterium paludis / qualifier
 
G+C Difference (%): 4.699999999999996
Amount4.699999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium arcticum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium arcticum / qualifier
 
16S Identity %: 23.926812104152006
Amount23.926812104152006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter arboriphilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier
 
16S Identity %: 23.692551505546753
Amount23.692551505546753
Unit1
Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier
 
POCPu: 49.457994579945805
Amount49.457994579945805
Unit1
Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier
 
G+C Difference (%): 5.59
Amount5.59
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium flexile / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium flexile / qualifier
 
16S Identity %: 23.676880222841227
Amount23.676880222841227
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
16S Identity %: 23.593220338983052
Amount23.593220338983052
Unit1
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
POCPu: 36.926478717523494
Amount36.926478717523494
Unit1
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
G+C Difference (%): 18.509999999999998
Amount18.509999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter thermophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter thermophilus / qualifier
 
16S Identity %: 23.52941176470588
Amount23.52941176470588
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium congolense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium congolense / qualifier
 
16S Identity %: 23.47645429362881
Amount23.47645429362881
Unit1
Property / Comparison to close relatives: Methanobacterium congolense / qualifier
 
POCPu: 34.964521654024956
Amount34.964521654024956
Unit1
Property / Comparison to close relatives: Methanobacterium congolense / qualifier
 
G+C Difference (%): 7.460000000000001
Amount7.460000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter tenebrarum / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier
 
16S Identity %: 23.454157782515992
Amount23.454157782515992
Unit1
Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier
 
POCPu: 39.56599286563615
Amount39.56599286563615
Unit1
Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier
 
G+C Difference (%): 11.019999999999996
Amount11.019999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium aggregans / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium aggregans / qualifier
 
16S Identity %: 23.39514978601997
Amount23.39514978601997
Unit1
Property / Comparison to close relatives: Methanobacterium aggregans / qualifier
 
POCPu: 35.193564605329314
Amount35.193564605329314
Unit1
Property / Comparison to close relatives: Methanobacterium aggregans / qualifier
 
G+C Difference (%): 7.109999999999999
Amount7.109999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter wolfei / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter wolfei / qualifier
 
16S Identity %: 23.28005559416261
Amount23.28005559416261
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter crinale / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter crinale / qualifier
 
16S Identity %: 23.26869806094183
Amount23.26869806094183
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter marburgensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier
 
16S Identity %: 23.186440677966104
Amount23.186440677966104
Unit1
Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier
 
POCPu: 38.28080229226361
Amount38.28080229226361
Unit1
Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier
 
G+C Difference (%): 17.61
Amount17.61
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium thermaggregans / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium thermaggregans / qualifier
 
16S Identity %: 22.823033707865168
Amount22.823033707865168
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosphaera cuniculi / rank
 
Normal rank
Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier
 
16S Identity %: 22.59158751696065
Amount22.59158751696065
Unit1
Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier
 
POCPu: 32.37150586113616
Amount32.37150586113616
Unit1
Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier
 
G+C Difference (%): 2.950000000000003
Amount2.950000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium palustre / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium palustre / qualifier
 
16S Identity %: 22.30933713471133
Amount22.30933713471133
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter wolfeii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter wolfeii / qualifier
 
POCPu: 37.15161649944258
Amount37.15161649944258
Unit1
Property / Comparison to close relatives: Methanothermobacter wolfeii / qualifier
 
G+C Difference (%): 17.64
Amount17.64
Unit1
Property / CAZyme
 
Property / CAZyme: GH154 / rank
 
Normal rank
Property / CAZyme: GH154 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH19 / rank
 
Normal rank
Property / CAZyme: GH19 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT13 / rank
 
Normal rank
Property / CAZyme: GT13 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 24
Amount24
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 8
Amount8
Unit1
Property / CAZyme
 
Property / CAZyme: GT81 / rank
 
Normal rank
Property / CAZyme: GT81 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT0 / rank
 
Normal rank
Property / CAZyme: GT0 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: GT26 / rank
 
Normal rank
Property / CAZyme: GT26 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT61 / rank
 
Normal rank
Property / CAZyme: GT61 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT28 / rank
 
Normal rank
Property / CAZyme: GT28 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE9 / rank
 
Normal rank
Property / CAZyme: CE9 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 5
Amount5
Unit1
Property / CAZyme
 
Property / CAZyme: CBM5 / rank
 
Normal rank
Property / CAZyme: CBM5 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: CBM48 / rank
 
Normal rank
Property / CAZyme: CBM48 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank
 
Normal rank
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme M biosynthesis / rank
 
Normal rank
Property / Pathway: Coenzyme M biosynthesis / qualifier
 
Property / Pathway
 
Property / Pathway: C10-C20 isoprenoid biosynthesis, bacteria / rank
 
Normal rank
Property / Pathway: C10-C20 isoprenoid biosynthesis, bacteria / qualifier
 
Property / Pathway
 
Property / Pathway: C10-C20 isoprenoid biosynthesis, archaea / rank
 
Normal rank
Property / Pathway: C10-C20 isoprenoid biosynthesis, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / rank
 
Normal rank
Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / qualifier
 
Property / Pathway
 
Property / Pathway: Isoleucine biosynthesis, pyruvate => 2-oxobutanoate / rank
 
Normal rank
Property / Pathway: Isoleucine biosynthesis, pyruvate => 2-oxobutanoate / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha / rank
 
Normal rank
Property / Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank
 
Normal rank
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / rank
 
Normal rank
Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA / rank
 
Normal rank
Property / Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, CO2 => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, CO2 => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine degradation I / rank
 
Normal rank
Property / Pathway: Cysteine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis from carbon dioxide / rank
 
Normal rank
Property / Pathway: Methanogenesis from carbon dioxide / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 1.3
Amount1.3
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 1.3
Amount1.3
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0.8
Amount0.8
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 3.3
Amount3.3
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 47.1
Amount47.1
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0.61
Amount0.61
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.6
Amount0.6
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 3.5
Amount3.5
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 1.3
Amount1.3
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 15.5
Amount15.5
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 18.1
Amount18.1
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.29
Amount0.29
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 13.6
Amount13.6
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 2.1
Amount2.1
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.09
Amount0.09
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 53.6
Amount53.6
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 3
Amount3
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 1
Amount1
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.07
Amount0.07
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 19.7
Amount19.7
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.38
Amount0.38
Unit1
Property / MAGs
 
Property / MAGs: PIGvsB100pB20.1471.fa / rank
 
Normal rank
Property / MAGs: PIGvsB100pB20.1471.fa / qualifier
 

Latest revision as of 11:54, 20 August 2026

genome assembly
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    English
    GCA_029219465.1
    genome assembly

      Statements

      no current description - please contribute here
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