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GCF_000404225.1 (Q191097): Difference between revisions

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Added qualifier: POCPu (P4): 8.215804790687262
 
(299 intermediate revisions by the same user not shown)
Property / Comparison to close relatives: Methanococcoides burtonii / qualifier
 
G+C Difference (%): 0.5
Amount0.5
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix soehngenii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
16S Identity %: 24.829467939972716
Amount24.829467939972716
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
POCPu: 6.326530612244897
Amount6.326530612244897
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
G+C Difference (%): 9.730000000000004
Amount9.730000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus mangrovi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
16S Identity %: 24.812542603953645
Amount24.812542603953645
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
POCPu: 8.442303280568938
Amount8.442303280568938
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
G+C Difference (%): 0.3500000000000014
Amount0.3500000000000014
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Picrophilus oshimae / rank
 
Normal rank
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
16S Identity %: 24.624829467939975
Amount24.624829467939975
Unit1
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
POCPu: 5.613728912158232
Amount5.613728912158232
Unit1
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
G+C Difference (%): 5.280000000000001
Amount5.280000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalobium evestigatum / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
16S Identity %: 24.519230769230766
Amount24.519230769230766
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
POCPu: 7.68327067669173
Amount7.68327067669173
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
G+C Difference (%): 4.839999999999996
Amount4.839999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolinea tarda / rank
 
Normal rank
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
16S Identity %: 24.509803921568626
Amount24.509803921568626
Unit1
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
POCPu: 5.778894472361809
Amount5.778894472361809
Unit1
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
G+C Difference (%): 13.57
Amount13.57
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans uponensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans uponensis / qualifier
 
16S Identity %: 24.475018102824038
Amount24.475018102824038
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
16S Identity %: 24.467353951890033
Amount24.467353951890033
Unit1
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
POCPu: 7.348784624081402
Amount7.348784624081402
Unit1
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
G+C Difference (%): 8.369999999999997
Amount8.369999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Picrophilus torridus / rank
 
Normal rank
Property / Comparison to close relatives: Picrophilus torridus / qualifier
 
16S Identity %: 24.45054945054945
Amount24.45054945054945
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus chikugoensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus chikugoensis / qualifier
 
16S Identity %: 24.421052631578945
Amount24.421052631578945
Unit1
Property / Comparison to close relatives: Methanoculleus chikugoensis / qualifier
 
POCPu: 6.5780581211984686
Amount6.5780581211984686
Unit1
Property / Comparison to close relatives: Methanoculleus chikugoensis / qualifier
 
G+C Difference (%): 20.6
Amount20.6
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus halotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
16S Identity %: 24.248927038626608
Amount24.248927038626608
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
POCPu: 7.711499206169199
Amount7.711499206169199
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
G+C Difference (%): 2.3200000000000003
Amount2.3200000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanotorris formicicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
16S Identity %: 24.24863387978142
Amount24.24863387978142
Unit1
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
POCPu: 7.712486883525709
Amount7.712486883525709
Unit1
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
G+C Difference (%): 8.82
Amount8.82
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus halophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
16S Identity %: 24.246575342465754
Amount24.246575342465754
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
POCPu: 8.791773778920309
Amount8.791773778920309
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
G+C Difference (%): 1.1400000000000006
Amount1.1400000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus zinderi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
16S Identity %: 24.2320819112628
Amount24.2320819112628
Unit1
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
POCPu: 7.913988029261805
Amount7.913988029261805
Unit1
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
G+C Difference (%): 2.8000000000000043
Amount2.8000000000000043
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus oregonensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus oregonensis / qualifier
 
16S Identity %: 24.203821656050955
Amount24.203821656050955
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides methylutens / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
16S Identity %: 24.19465387251542
Amount24.19465387251542
Unit1
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
POCPu: 8.304337740663419
Amount8.304337740663419
Unit1
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
G+C Difference (%): 1.240000000000002
Amount1.240000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus sediminis / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus sediminis / qualifier
 
16S Identity %: 24.192390524048815
Amount24.192390524048815
Unit1
Property / Comparison to close relatives: Methanoculleus sediminis / qualifier
 
POCPu: 6.621903218337579
Amount6.621903218337579
Unit1
Property / Comparison to close relatives: Methanoculleus sediminis / qualifier
 
G+C Difference (%): 21.04
Amount21.04
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus marisnigri / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
16S Identity %: 24.178082191780824
Amount24.178082191780824
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
POCPu: 6.8082160166166625
Amount6.8082160166166625
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
G+C Difference (%): 20.800000000000004
Amount20.800000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus psychrotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
16S Identity %: 24.177396280400572
Amount24.177396280400572
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
POCPu: 7.370600414078675
Amount7.370600414078675
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
G+C Difference (%): 0.07000000000000028
Amount0.07000000000000028
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides alaskense / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
16S Identity %: 24.11764705882353
Amount24.11764705882353
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
POCPu: 8.429752066115702
Amount8.429752066115702
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
G+C Difference (%): 0.4299999999999997
Amount0.4299999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanogenium frigidum / rank
 
Normal rank
Property / Comparison to close relatives: Methanogenium frigidum / qualifier
 
16S Identity %: 24.071526822558457
Amount24.071526822558457
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans hollandica / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
16S Identity %: 24.06380027739251
Amount24.06380027739251
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
POCPu: 8.019603475161507
Amount8.019603475161507
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
G+C Difference (%): 0.6099999999999994
Amount0.6099999999999994
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus sediminis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
16S Identity %: 24.062713019768232
Amount24.062713019768232
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
POCPu: 8.037877119577185
Amount8.037877119577185
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
G+C Difference (%): 0.3200000000000003
Amount0.3200000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix harundinacea / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
16S Identity %: 23.901712583767683
Amount23.901712583767683
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
POCPu: 7.7678989237248475
Amount7.7678989237248475
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
G+C Difference (%): 14.240000000000002
Amount14.240000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Cuniculiplasma divulgatum / rank
 
Normal rank
Property / Comparison to close relatives: Cuniculiplasma divulgatum / qualifier
 
16S Identity %: 23.858214042263125
Amount23.858214042263125
Unit1
Property / Comparison to close relatives: Cuniculiplasma divulgatum / qualifier
 
POCPu: 4.72193074501574
Amount4.72193074501574
Unit1
Property / Comparison to close relatives: Cuniculiplasma divulgatum / qualifier
 
G+C Difference (%): 3.960000000000001
Amount3.960000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermogymnomonas acidicola / rank
 
Normal rank
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
16S Identity %: 23.81300219138057
Amount23.81300219138057
Unit1
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
POCPu: 6.569630212431156
Amount6.569630212431156
Unit1
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
G+C Difference (%): 15.170000000000002
Amount15.170000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix thermoacetophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
16S Identity %: 23.73806275579809
Amount23.73806275579809
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
POCPu: 9.584926269797926
Amount9.584926269797926
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
G+C Difference (%): 12.29
Amount12.29
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus levihalophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
16S Identity %: 23.715124816446405
Amount23.715124816446405
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
POCPu: 8.220858895705522
Amount8.220858895705522
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
G+C Difference (%): 1.2600000000000051
Amount1.2600000000000051
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier
 
16S Identity %: 23.68972746331237
Amount23.68972746331237
Unit1
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier
 
POCPu: 42.41402562373567
Amount42.41402562373567
Unit1
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier
 
G+C Difference (%): 19.22
Amount19.22
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus vulcani / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
16S Identity %: 23.637650389242744
Amount23.637650389242744
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
POCPu: 7.9454427365230575
Amount7.9454427365230575
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
G+C Difference (%): 1.0599999999999952
Amount1.0599999999999952
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus profundi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
16S Identity %: 23.62204724409449
Amount23.62204724409449
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
POCPu: 7.265854682906342
Amount7.265854682906342
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
G+C Difference (%): 1.3100000000000023
Amount1.3100000000000023
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus palmolei / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus palmolei / qualifier
 
16S Identity %: 23.615977575332867
Amount23.615977575332867
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosphaerula palustris / rank
 
Normal rank
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
16S Identity %: 23.593964334705074
Amount23.593964334705074
Unit1
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
POCPu: 5.895055063701145
Amount5.895055063701145
Unit1
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
G+C Difference (%): 14.090000000000003
Amount14.090000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Acidiplasma aeolicum / rank
 
Normal rank
Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier
 
16S Identity %: 23.35820895522388
Amount23.35820895522388
Unit1
Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier
 
POCPu: 5.296205296205296
Amount5.296205296205296
Unit1
Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier
 
G+C Difference (%): 7.280000000000001
Amount7.280000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides orientis / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
16S Identity %: 23.31288343558282
Amount23.31288343558282
Unit1
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
POCPu: 8.525290904773213
Amount8.525290904773213
Unit1
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
G+C Difference (%): 1.4200000000000017
Amount1.4200000000000017
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermoplasma acidophilum / rank
 
Normal rank
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
16S Identity %: 23.26057298772169
Amount23.26057298772169
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
POCPu: 6.224430157802455
Amount6.224430157802455
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
G+C Difference (%): 4.730000000000004
Amount4.730000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus thermophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
16S Identity %: 23.22045611610228
Amount23.22045611610228
Unit1
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
POCPu: 7.330735509011204
Amount7.330735509011204
Unit1
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
G+C Difference (%): 18.060000000000002
Amount18.060000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Acidiplasma cupricumulans / rank
 
Normal rank
Property / Comparison to close relatives: Acidiplasma cupricumulans / qualifier
 
16S Identity %: 23.108952116585705
Amount23.108952116585705
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus receptaculi / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus receptaculi / qualifier
 
16S Identity %: 22.99625468164794
Amount22.99625468164794
Unit1
Property / Comparison to close relatives: Methanoculleus receptaculi / qualifier
 
POCPu: 6.860226104830422
Amount6.860226104830422
Unit1
Property / Comparison to close relatives: Methanoculleus receptaculi / qualifier
 
G+C Difference (%): 17.830000000000005
Amount17.830000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoregula boonei / rank
 
Normal rank
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
16S Identity %: 22.607489597780862
Amount22.607489597780862
Unit1
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
POCPu: 5.9589041095890405
Amount5.9589041095890405
Unit1
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
G+C Difference (%): 13.25
Amount13.25
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocella paludicola / rank
 
Normal rank
Property / Comparison to close relatives: Methanocella paludicola / qualifier
 
16S Identity %: 22.587412587412587
Amount22.587412587412587
Unit1
Property / Comparison to close relatives: Methanocella paludicola / qualifier
 
POCPu: 6.850152905198777
Amount6.850152905198777
Unit1
Property / Comparison to close relatives: Methanocella paludicola / qualifier
 
G+C Difference (%): 13.660000000000004
Amount13.660000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylophilus alvi / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier
 
16S Identity %: 21.766561514195583
Amount21.766561514195583
Unit1
Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier
 
POCPu: 26.777522935779817
Amount26.777522935779817
Unit1
Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier
 
G+C Difference (%): 14.330000000000005
Amount14.330000000000005
Unit1
Property / CAZyme
 
Property / CAZyme: GH32 / rank
 
Normal rank
Property / CAZyme: GH32 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH19 / rank
 
Normal rank
Property / CAZyme: GH19 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH43 / rank
 
Normal rank
Property / CAZyme: GH43 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT7 / rank
 
Normal rank
Property / CAZyme: GT7 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 11
Amount11
Unit1
Property / CAZyme
 
Property / CAZyme: GT20 / rank
 
Normal rank
Property / CAZyme: GT20 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 10
Amount10
Unit1
Property / CAZyme
 
Property / CAZyme: CE14 / rank
 
Normal rank
Property / CAZyme: CE14 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: CE1 / rank
 
Normal rank
Property / CAZyme: CE1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: CBM5 / rank
 
Normal rank
Property / CAZyme: CBM5 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Proline biosynthesis, glutamate => proline / rank
 
Normal rank
Property / Pathway: Proline biosynthesis, glutamate => proline / qualifier
 
Property / Pathway
 
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank
 
Normal rank
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank
 
Normal rank
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / rank
 
Normal rank
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / qualifier
 
Property / Pathway
 
Property / Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea / rank
 
Normal rank
Property / Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a, c-diamide / rank
 
Normal rank
Property / Pathway: Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a, c-diamide / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, methanol => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, methanol => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Methanol conversion / rank
 
Normal rank
Property / Pathway: Methanol conversion / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 2.3
Amount2.3
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 5.2
Amount5.2
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0.2
Amount0.2
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 1.4
Amount1.4
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.25
Amount0.25
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 4.4
Amount4.4
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.15
Amount0.15
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 7.6
Amount7.6
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.06
Amount0.06
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 1.1
Amount1.1
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.19
Amount0.19
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 4.6
Amount4.6
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0.6
Amount0.6
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0.9
Amount0.9
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / MAGs
 
Property / MAGs: HMP_2012__SRS048870__bin_16.fa / rank
 
Normal rank
Property / MAGs: HMP_2012__SRS048870__bin_16.fa / qualifier
 

Latest revision as of 16:42, 19 August 2026

genome assembly
Language Label Description Also known as
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No label defined
    English
    GCF_000404225.1
    genome assembly

      Statements

      no current description - please contribute here
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