Jump to content

GCF_016706325.1 (Q189835): Difference between revisions

Add links
From wikibase
← Older edit
Admin (talk | contribs)
Bots, Bureaucrats, Interface administrators, Administrators
4,434,266 edits
‎Added qualifier: Relative abundance (%) (P19): 0.28
‎Added qualifier: Ecosystem (P27): Generic (Q43559)
 
(39 intermediate revisions by the same user not shown)
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 1.1
Amount1.1
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.91
Amount0.91
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 1.8
Amount1.8
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 1.33
Amount1.33
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 3.7
Amount3.7
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.23
Amount0.23
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0.06
Amount0.06
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 23
Amount23
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 2.56
Amount2.56
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 16.1
Amount16.1
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 1.12
Amount1.12
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 2.4
Amount2.4
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 1.45
Amount1.45
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 2.7
Amount2.7
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 1.35
Amount1.35
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0.7
Amount0.7
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: GCA_016706325.1_ASM1670632v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_016706325.1_ASM1670632v1_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300025613_26.fna / rank
 
Normal rank
Property / MAGs: 3300025613_26.fna / qualifier
 

Latest revision as of 14:54, 19 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCF_016706325.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Methanothrix soehngenii
      16S Identity %
      97.47440273037543
      POCPu
      69.95144758137025
      ANI %
      83.5408
      G+C Difference (%)
      2.229999999999997
      0 references
      Methanothrix harundinacea
      16S Identity %
      91.49888143176734
      POCPu
      47.23404255319149
      G+C Difference (%)
      2.280000000000001
      0 references
      Methanothrix thermoacetophila
      16S Identity %
      91.32513661202186
      POCPu
      53.43511450381679
      G+C Difference (%)
      0.3299999999999983
      0 references
      Methanohalophilus portucalensis
      16S Identity %
      87.36492103075643
      POCPu
      21.27705627705628
      G+C Difference (%)
      11.280000000000001
      0 references
      Methanohalophilus mahii
      16S Identity %
      86.96245733788396
      POCPu
      21.949602122015914
      G+C Difference (%)
      10.600000000000001
      0 references
      Methanomethylovorans hollandica
      16S Identity %
      86.94444444444444
      POCPu
      21.203883495145632
      G+C Difference (%)
      11.350000000000001
      0 references
      Methanohalophilus halophilus
      16S Identity %
      86.89986282578876
      POCPu
      21.68754119973632
      G+C Difference (%)
      10.82
      0 references
      Methanosalsum zhilinae
      16S Identity %
      86.7844522968198
      POCPu
      21.58590308370044
      G+C Difference (%)
      14.060000000000002
      0 references
      Methanosarcina soligelidi
      16S Identity %
      86.53122648607976
      0 references
      Methanococcoides burtonii
      16S Identity %
      86.47540983606558
      POCPu
      21.138845553822154
      G+C Difference (%)
      12.46
      0 references
      Methanosalsum natronophilum
      16S Identity %
      86.43006263048017
      POCPu
      20.18737452598706
      G+C Difference (%)
      18.879999999999995
      0 references
      Methanosarcina vacuolata
      16S Identity %
      86.3791923340178
      POCPu
      20.963354136661867
      G+C Difference (%)
      13.509999999999998
      0 references
      Methermicoccus shengliensis
      16S Identity %
      86.37724550898204
      POCPu
      22.119815668202765
      G+C Difference (%)
      1.3500000000000014
      0 references
      Methanosarcina baltica
      16S Identity %
      86.37059724349157
      0 references
      Methanosarcina horonobensis
      16S Identity %
      86.36683063949403
      POCPu
      18.57678983833718
      G+C Difference (%)
      11.909999999999997
      0 references
      Methanosarcina mazei
      16S Identity %
      86.25377643504531
      POCPu
      20.919123702849614
      G+C Difference (%)
      11.799999999999997
      0 references
      Methanosarcina subterranea
      16S Identity %
      86.18283321702721
      0 references
      Methanolobus chelungpuianus
      16S Identity %
      86.16448885472713
      POCPu
      21.595871377530766
      G+C Difference (%)
      5.07
      0 references
      Methanomethylovorans thermophila
      16S Identity %
      86.14591009579956
      0 references
      Methanomethylovorans uponensis
      16S Identity %
      85.92162554426706
      0 references
      Methanosarcina acetivorans
      16S Identity %
      85.88567395906846
      POCPu
      18.54806002433419
      G+C Difference (%)
      10.54
      0 references
      Methanolobus sediminis
      16S Identity %
      85.8703071672355
      POCPu
      20.838139177239523
      G+C Difference (%)
      12.280000000000001
      0 references
      Methanolobus zinderi
      16S Identity %
      85.85099111414901
      POCPu
      20.99767981438515
      G+C Difference (%)
      9.159999999999997
      0 references
      Methanococcoides orientis
      16S Identity %
      85.80204778156997
      POCPu
      21.85960591133005
      G+C Difference (%)
      10.54
      0 references
      Methanococcoides methylutens
      16S Identity %
      85.79272477693891
      POCPu
      22.083668543845537
      G+C Difference (%)
      10.719999999999999
      0 references
      Methanosarcina lacustris
      16S Identity %
      85.76642335766424
      POCPu
      20.22734871280508
      G+C Difference (%)
      11.399999999999999
      0 references
      Methanosarcina siciliae
      16S Identity %
      85.75342465753425
      POCPu
      19.91399762752076
      G+C Difference (%)
      10.280000000000001
      0 references
      Methanolobus halotolerans
      16S Identity %
      85.74498567335243
      POCPu
      22.05128205128205
      G+C Difference (%)
      9.64
      0 references
      Methanolobus mangrovi
      16S Identity %
      85.73378839590444
      POCPu
      21.61354581673307
      G+C Difference (%)
      11.61
      0 references
      Methanosarcina flavescens
      16S Identity %
      85.61202576950609
      POCPu
      22.480329711502435
      G+C Difference (%)
      11.909999999999997
      0 references
      Methanolobus psychrotolerans
      16S Identity %
      85.53008595988538
      POCPu
      19.868876343106905
      G+C Difference (%)
      11.89
      0 references
      Methanosarcina spelaei
      16S Identity %
      85.46816479400749
      POCPu
      19.63750748951468
      G+C Difference (%)
      14.469999999999999
      0 references
      Methanohalophilus levihalophilus
      16S Identity %
      85.44117647058823
      POCPu
      21.896114864864867
      G+C Difference (%)
      10.699999999999996
      0 references
      Methanococcoides alaskense
      16S Identity %
      85.34609720176731
      POCPu
      20.772058823529413
      G+C Difference (%)
      11.530000000000001
      0 references
      Methanolobus bombayensis
      16S Identity %
      85.28405201916496
      POCPu
      20.360728895500184
      G+C Difference (%)
      13.5
      0 references
      Methanosarcina barkeri
      16S Identity %
      85.27519656897783
      POCPu
      20.315208825847122
      G+C Difference (%)
      14.030000000000001
      0 references
      Methanohalobium evestigatum
      16S Identity %
      85.00687757909216
      POCPu
      19.15802318486882
      G+C Difference (%)
      16.799999999999997
      0 references
      Methanolobus oregonensis
      16S Identity %
      84.97519489723601
      0 references
      Methanolobus profundi
      16S Identity %
      84.94623655913979
      POCPu
      19.52793656647612
      G+C Difference (%)
      10.649999999999999
      0 references
      Methanolobus taylorii
      16S Identity %
      84.8936170212766
      0 references
      Methanosarcina thermophila
      16S Identity %
      84.52296819787986
      POCPu
      22.951761102603367
      G+C Difference (%)
      12.07
      0 references
      Methanolobus vulcani
      16S Identity %
      84.32624113475178
      POCPu
      20.454545454545457
      G+C Difference (%)
      13.019999999999996
      0 references
      Methanolinea tarda
      16S Identity %
      84.29172510518934
      POCPu
      13.928823945321705
      G+C Difference (%)
      1.6099999999999994
      0 references
      Methanoculleus thermophilus
      16S Identity %
      84.07202216066482
      POCPu
      17.327459618208515
      G+C Difference (%)
      6.100000000000001
      0 references
      Methanimicrococcus blatticola
      16S Identity %
      84.00556328233658
      POCPu
      16.44138608994839
      G+C Difference (%)
      11.240000000000002
      0 references
      Methanoculleus marisnigri
      16S Identity %
      83.7448559670782
      POCPu
      16.900280336403682
      G+C Difference (%)
      8.840000000000003
      0 references
      Methanolobus tindarius
      16S Identity %
      83.43949044585987
      POCPu
      19.535394183281507
      G+C Difference (%)
      13.43
      0 references
      Methanosphaerula palustris
      16S Identity %
      83.20715760495526
      POCPu
      13.69992441421013
      G+C Difference (%)
      2.1300000000000026
      0 references
      Methanocella arvoryzae
      16S Identity %
      82.92349726775956
      POCPu
      15.488454706927177
      G+C Difference (%)
      1.3800000000000026
      0 references
      Carbon source
      starch
      0 references
      CAZyme
      GH15
      Occurance
      2
      0 references
      GH13
      Occurance
      2
      0 references
      GH133
      Occurance
      1
      0 references
      GH73
      Occurance
      1
      0 references
      GH57
      Occurance
      1
      0 references
      GH105
      Occurance
      1
      0 references
      GH104
      Occurance
      1
      0 references
      GH0
      Occurance
      3
      0 references
      GH43
      Occurance
      1
      0 references
      GT66
      Occurance
      2
      0 references
      GT13
      Occurance
      1
      0 references
      GT2
      Occurance
      19
      0 references
      GT35
      Occurance
      3
      0 references
      GT4
      Occurance
      21
      0 references
      GT3
      Occurance
      1
      0 references
      GT1
      Occurance
      4
      0 references
      GT0
      Occurance
      3
      0 references
      CE9
      Occurance
      2
      0 references
      CE14
      Occurance
      1
      0 references
      CBM2
      Occurance
      1
      0 references
      CBM50
      Occurance
      8
      0 references
      CBM32
      Occurance
      1
      0 references
      CBM5
      Occurance
      1
      0 references
      CBM6
      Occurance
      1
      0 references
      Pathway
      Ecosystem
       
      Retrieved from "https://taxakg.zbmed.de/w/index.php?title=Item:Q189835&oldid=3879150"