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‎Added qualifier: Prevalence (%) (P18): 32.6
 
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Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 1.51
Amount1.51
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 26.1
Amount26.1
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.39
Amount0.39
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0.9
Amount0.9
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0.05
Amount0.05
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 12.6
Amount12.6
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.16
Amount0.16
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 24.5
Amount24.5
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.2
Amount0.2
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 59.1
Amount59.1
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 1.95
Amount1.95
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 2.8
Amount2.8
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 1.7
Amount1.7
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.18
Amount0.18
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 5.9
Amount5.9
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.16
Amount0.16
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0.7
Amount0.7
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.13
Amount0.13
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 16:36, 23 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_002151545.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Pedobacter humicola
      16S Identity %
      99.1701244813278
      0 references
      Pedobacter ghigonis
      16S Identity %
      98.09084924292297
      POCPu
      75.57259610533751
      ANI %
      81.5722
      G+C Difference (%)
      1.1499999999999986
      0 references
      Pedobacter kyonggii
      16S Identity %
      97.92674498963373
      POCPu
      71.76401526269444
      ANI %
      87.8791
      G+C Difference (%)
      0.4099999999999966
      0 references
      Pedobacter suwonensis
      16S Identity %
      97.92099792099792
      POCPu
      63.69752962442258
      ANI %
      82.7981
      G+C Difference (%)
      0.3400000000000034
      0 references
      Pedobacter riviphilus
      16S Identity %
      97.8021978021978
      POCPu
      73.76316312338565
      ANI %
      87.0128
      G+C Difference (%)
      0.6599999999999966
      0 references
      Pedobacter terrae
      16S Identity %
      97.7657413676371
      POCPu
      64.49478748997595
      ANI %
      84.0617
      G+C Difference (%)
      0.4200000000000017
      0 references
      Pedobacter alluvionis
      16S Identity %
      97.71265189421014
      POCPu
      64.62450592885376
      ANI %
      85.5195
      G+C Difference (%)
      0.7899999999999991
      0 references
      Pedobacter soli
      16S Identity %
      97.6462676529926
      POCPu
      74.8032280561921
      ANI %
      81.4948
      G+C Difference (%)
      1.25
      0 references
      Pedobacter borealis
      16S Identity %
      97.59206798866855
      POCPu
      70.04499897729598
      ANI %
      87.9973
      G+C Difference (%)
      0.7999999999999972
      0 references
      Pedobacter agri
      16S Identity %
      97.53333333333333
      POCPu
      58.886292043491515
      ANI %
      80.4541
      G+C Difference (%)
      1.1700000000000017
      0 references
      Pedobacter sandarakinus
      16S Identity %
      97.4915254237288
      POCPu
      61.4443931702815
      ANI %
      79.5464
      G+C Difference (%)
      0.35999999999999943
      0 references
      Pedobacter ginsenosidimutans
      16S Identity %
      97.2972972972973
      POCPu
      72.22381910510684
      ANI %
      88.3391
      G+C Difference (%)
      0.5
      0 references
      Pedobacter psychrodurus
      16S Identity %
      97.2508591065292
      POCPu
      73.89323561453898
      ANI %
      88.9319
      G+C Difference (%)
      0.9600000000000009
      0 references
      Pedobacter miscanthi
      16S Identity %
      97.1606648199446
      POCPu
      67.807386629266
      ANI %
      82.9804
      G+C Difference (%)
      0.5700000000000003
      0 references
      Pedobacter nototheniae
      16S Identity %
      96.99510831586304
      POCPu
      59.36945401398893
      ANI %
      80.0223
      G+C Difference (%)
      3.729999999999997
      0 references
      Pedobacter roseus
      16S Identity %
      96.95872556118755
      POCPu
      70.96309111880046
      ANI %
      83.5121
      G+C Difference (%)
      0.07000000000000028
      0 references
      Pedobacter zeae
      16S Identity %
      96.89189189189189
      POCPu
      69.50904392764858
      ANI %
      82.7305
      G+C Difference (%)
      1.1400000000000006
      0 references
      Pedobacter vanadiisoli
      16S Identity %
      96.74515235457064
      0 references
      Pedobacter endophyticus
      16S Identity %
      96.69649002064695
      POCPu
      59.8585690515807
      ANI %
      79.6112
      G+C Difference (%)
      2.1499999999999986
      0 references
      Pedobacter petrophilus
      16S Identity %
      96.6711956521739
      POCPu
      60.12489762489762
      ANI %
      80.0645
      G+C Difference (%)
      0.5499999999999972
      0 references
      Pedobacter jejuensis
      16S Identity %
      96.55172413793103
      POCPu
      60.01097694840835
      ANI %
      79.7092
      G+C Difference (%)
      3.3999999999999986
      0 references
      Pedobacter aquatilis
      16S Identity %
      96.55172413793103
      POCPu
      61.173615707037285
      ANI %
      79.8195
      G+C Difference (%)
      2.9299999999999997
      0 references
      Pedobacter frigoris
      16S Identity %
      96.28610729023383
      POCPu
      49.53607684750573
      G+C Difference (%)
      0.9500000000000028
      0 references
      Pedobacter fastidiosus
      16S Identity %
      96.26865671641791
      POCPu
      62.19981287036075
      ANI %
      80.2934
      G+C Difference (%)
      2.9099999999999966
      0 references
      Pedobacter rhizosphaerae
      16S Identity %
      96.23149394347242
      POCPu
      66.60239496651106
      ANI %
      79.2417
      G+C Difference (%)
      0.04999999999999716
      0 references
      Pedobacter schmidteae
      16S Identity %
      96.23149394347242
      POCPu
      46.135458167330675
      G+C Difference (%)
      1.9600000000000009
      0 references
      Pedobacter nyackensis
      16S Identity %
      95.90723055934515
      POCPu
      46.68262995111244
      G+C Difference (%)
      0.3200000000000003
      0 references
      Pedobacter heparinus
      16S Identity %
      95.80559254327564
      POCPu
      47.25983236621534
      G+C Difference (%)
      2.8699999999999974
      0 references
      Pedobacter lithocola
      16S Identity %
      95.75185434929197
      0 references
      Pedobacter jamesrossensis
      16S Identity %
      95.7259158751696
      0 references
      Pedobacter psychroterrae
      16S Identity %
      95.71230982019364
      POCPu
      46.15384615384615
      G+C Difference (%)
      2.6600000000000037
      0 references
      Pedobacter nutrimenti
      16S Identity %
      95.60741249142073
      POCPu
      45.74809466506217
      G+C Difference (%)
      2.450000000000003
      0 references
      Pedobacter mendelii
      16S Identity %
      95.52238805970148
      POCPu
      60.524261015058556
      ANI %
      79.7076
      G+C Difference (%)
      4.089999999999996
      0 references
      Pedobacter steynii
      16S Identity %
      95.48172757475083
      POCPu
      47.09804256774083
      G+C Difference (%)
      2.5799999999999983
      0 references
      Pedobacter frigidisoli
      16S Identity %
      95.4639175257732
      POCPu
      63.020833333333336
      ANI %
      80.3274
      G+C Difference (%)
      1.7100000000000009
      0 references
      Pedobacter lycopersici
      16S Identity %
      95.41095890410959
      0 references
      Pedobacter hiemivivus
      16S Identity %
      95.40150995195607
      POCPu
      45.951378254211335
      G+C Difference (%)
      0.18999999999999773
      0 references
      Pedobacter changchengzhani
      16S Identity %
      95.35809018567639
      POCPu
      51.47250147841513
      ANI %
      78.6381
      G+C Difference (%)
      3.9399999999999977
      0 references
      Pedobacter panaciterrae
      16S Identity %
      95.35201640464798
      POCPu
      50.17773080987607
      G+C Difference (%)
      0.46000000000000085
      0 references
      Pedobacter foliorum
      16S Identity %
      95.32279314888011
      POCPu
      48.90011890606421
      G+C Difference (%)
      1.3299999999999983
      0 references
      Pedobacter antarcticus
      16S Identity %
      95.31459170013386
      POCPu
      43.875765529308836
      G+C Difference (%)
      1.2000000000000028
      0 references
      Pedobacter africanus
      16S Identity %
      95.30201342281879
      POCPu
      47.175774877650895
      G+C Difference (%)
      4.229999999999997
      0 references
      Pedobacter metabolipauper
      16S Identity %
      95.28239202657808
      POCPu
      47.082683307332296
      G+C Difference (%)
      1.4500000000000028
      0 references
      Pedobacter duraquae
      16S Identity %
      95.28239202657808
      POCPu
      46.14909390444811
      G+C Difference (%)
      2.1199999999999974
      0 references
      Pedobacter gandavensis
      16S Identity %
      95.12516469038208
      POCPu
      47.46906636670416
      G+C Difference (%)
      0.6499999999999986
      0 references
      Pedobacter planticolens
      16S Identity %
      95.11873350923483
      POCPu
      52.77908067542214
      ANI %
      77.7943
      G+C Difference (%)
      4.100000000000001
      0 references
      Pedobacter hartonius
      16S Identity %
      94.70509383378017
      POCPu
      44.418003103983445
      G+C Difference (%)
      3.8500000000000014
      0 references
      Pedobacter cryoconitis
      16S Identity %
      94.58193979933111
      POCPu
      45.27731747733697
      G+C Difference (%)
      0.1700000000000017
      0 references
      Pedobacter westerhofensis
      16S Identity %
      94.41117764471058
      POCPu
      43.38125466766243
      G+C Difference (%)
      4.030000000000001
      0 references
      Pedobacter lusitanus
      16S Identity %
      94.40052700922266
      POCPu
      45.84759855228406
      G+C Difference (%)
      0.0799999999999983
      0 references
      CAZyme
      GH13
      Occurance
      8
      0 references
      GH31
      Occurance
      4
      0 references
      GH2
      Occurance
      19
      0 references
      GH35
      Occurance
      46
      0 references
      GH106
      Occurance
      2
      0 references
      GH18
      Occurance
      8
      0 references
      GH0
      Occurance
      12
      0 references
      GH19
      Occurance
      4
      0 references
      GH95
      Occurance
      10
      0 references
      GH78
      Occurance
      6
      0 references
      GH138
      Occurance
      1
      0 references
      GH116
      Occurance
      1
      0 references
      GH38
      Occurance
      1
      0 references
      GH3
      Occurance
      5
      0 references
      GH146
      Occurance
      3
      0 references
      GH141
      Occurance
      1
      0 references
      GH6
      Occurance
      3
      0 references
      GH115
      Occurance
      1
      0 references
      GH43
      Occurance
      24
      0 references
      GH9
      Occurance
      1
      0 references
      GH139
      Occurance
      1
      0 references
      GH20
      Occurance
      8
      0 references
      GH65
      Occurance
      3
      0 references
      GH94
      Occurance
      1
      0 references
      GH92
      Occurance
      6
      0 references
      GH29
      Occurance
      18
      0 references
      GH36
      Occurance
      5
      0 references
      GH89
      Occurance
      5
      0 references
      GH97
      Occurance
      5
      0 references
      GH33
      Occurance
      7
      0 references
      GH127
      Occurance
      1
      0 references
      GH51
      Occurance
      3
      0 references
      GH11
      Occurance
      1
      0 references
      GH105
      Occurance
      7
      0 references
      GH28
      Occurance
      7
      0 references
      GH16
      Occurance
      40
      0 references
      GH110
      Occurance
      2
      0 references
      GH143
      Occurance
      1
      0 references
      GH15
      Occurance
      1
      0 references
      GH5
      Occurance
      3
      0 references
      GH123
      Occurance
      1
      0 references
      GH39
      Occurance
      1
      0 references
      GH142
      Occurance
      1
      0 references
      GH117
      Occurance
      2
      0 references
      GH101
      Occurance
      1
      0 references
      GH32
      Occurance
      2
      0 references
      GH79
      Occurance
      1
      0 references
      GH30
      Occurance
      3
      0 references
      GH154
      Occurance
      7
      0 references
      GH130
      Occurance
      2
      0 references
      GH10
      Occurance
      2
      0 references
      GH125
      Occurance
      1
      0 references
      GH23
      Occurance
      3
      0 references
      GH140
      Occurance
      1
      0 references
      GH144
      Occurance
      1
      0 references
      GH109
      Occurance
      1
      0 references
      GH1
      Occurance
      1
      0 references
      GH88
      Occurance
      7
      0 references
      GH145
      Occurance
      1
      0 references
      GH27
      Occurance
      1
      0 references
      GH99
      Occurance
      1
      0 references
      GH137
      Occurance
      1
      0 references
      GH159
      Occurance
      1
      0 references
      GH25
      Occurance
      1
      0 references
      GH73
      Occurance
      2
      0 references
      GT2
      Occurance
      38
      0 references
      GT13
      Occurance
      1
      0 references
      GT51
      Occurance
      5
      0 references
      GT4
      Occurance
      36
      0 references
      GT5
      Occurance
      4
      0 references
      GT20
      Occurance
      1
      0 references
      GT22
      Occurance
      1
      0 references
      GT83
      Occurance
      1
      0 references
      GT0
      Occurance
      6
      0 references
      GT1
      Occurance
      7
      0 references
      GT30
      Occurance
      3
      0 references
      GT28
      Occurance
      4
      0 references
      GT32
      Occurance
      1
      0 references
      GT19
      Occurance
      1
      0 references
      GT9
      Occurance
      1
      0 references
      GT10
      Occurance
      1
      0 references
      GT11
      Occurance
      3
      0 references
      GT6
      Occurance
      2
      0 references
      GT26
      Occurance
      2
      0 references
      PL0
      Occurance
      2
      0 references
      PL15
      Occurance
      2
      0 references
      PL8
      Occurance
      3
      0 references
      PL12
      Occurance
      2
      0 references
      PL35
      Occurance
      1
      0 references
      PL11
      Occurance
      1
      0 references
      PL13
      Occurance
      4
      0 references
      PL1
      Occurance
      3
      0 references
      PL9
      Occurance
      1
      0 references
      PL6
      Occurance
      2
      0 references
      PL10
      Occurance
      1
      0 references
      PL36
      Occurance
      1
      0 references
      CE4
      Occurance
      7
      0 references
      CE0
      Occurance
      5
      0 references
      CE1
      Occurance
      2
      0 references
      CE14
      Occurance
      3
      0 references
      CE9
      Occurance
      2
      0 references
      CE11
      Occurance
      4
      0 references
      CE8
      Occurance
      3
      0 references
      CE12
      Occurance
      8
      0 references
      CE3
      Occurance
      1
      0 references
      CBM32
      Occurance
      31
      0 references
      CBM57
      Occurance
      2
      0 references
      CBM47
      Occurance
      3
      0 references
      CBM6
      Occurance
      11
      0 references
      CBM51
      Occurance
      5
      0 references
      CBM12
      Occurance
      1
      0 references
      CBM50
      Occurance
      18
      0 references
      CBM66
      Occurance
      1
      0 references
      CBM13
      Occurance
      21
      0 references
      CBM9
      Occurance
      1
      0 references
      CBM48
      Occurance
      4
      0 references
      CBM35
      Occurance
      4
      0 references
      CBM20
      Occurance
      1
      0 references
      CBM38
      Occurance
      2
      0 references
      CBM5
      Occurance
      6
      0 references
      CBM0
      Occurance
      4
      0 references
      Ecosystem
      MAGs
      no MAG matches found
      0 references
       
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