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GCA_018304465.1 (Q180734): Difference between revisions

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Added qualifier: 16S Identity % (P3): 24.776324845147972
 
(173 intermediate revisions by the same user not shown)
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium oryzae / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium oryzae / qualifier
 
16S Identity %: 24.738675958188153
Amount24.738675958188153
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium subterraneum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier
 
16S Identity %: 24.29971988795518
Amount24.29971988795518
Unit1
Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier
 
POCPu: 2.4515086206896552
Amount2.4515086206896552
Unit1
Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier
 
G+C Difference (%): 8.469999999999999
Amount8.469999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium ivanovii / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium ivanovii / qualifier
 
16S Identity %: 24.21875
Amount24.21875
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium bryantii / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium bryantii / qualifier
 
16S Identity %: 23.980815347721823
Amount23.980815347721823
Unit1
Property / Comparison to close relatives: Methanobacterium bryantii / qualifier
 
POCPu: 1.915542011319112
Amount1.915542011319112
Unit1
Property / Comparison to close relatives: Methanobacterium bryantii / qualifier
 
G+C Difference (%): 14.68
Amount14.68
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter cuticularis / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter cuticularis / qualifier
 
16S Identity %: 23.92638036809816
Amount23.92638036809816
Unit1
Property / Comparison to close relatives: Methanobrevibacter cuticularis / qualifier
 
POCPu: 1.916741539383049
Amount1.916741539383049
Unit1
Property / Comparison to close relatives: Methanobrevibacter cuticularis / qualifier
 
G+C Difference (%): 21.08
Amount21.08
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium veterum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium veterum / qualifier
 
16S Identity %: 23.916292974588938
Amount23.916292974588938
Unit1
Property / Comparison to close relatives: Methanobacterium veterum / qualifier
 
POCPu: 1.844532279314888
Amount1.844532279314888
Unit1
Property / Comparison to close relatives: Methanobacterium veterum / qualifier
 
G+C Difference (%): 14.699999999999996
Amount14.699999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium alcaliphilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
16S Identity %: 23.806129722024234
Amount23.806129722024234
Unit1
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
POCPu: 2.2644674308079393
Amount2.2644674308079393
Unit1
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
G+C Difference (%): 14.469999999999999
Amount14.469999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium petrolearium / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier
 
16S Identity %: 23.78886478669559
Amount23.78886478669559
Unit1
Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier
 
POCPu: 2.2614451185879756
Amount2.2614451185879756
Unit1
Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier
 
G+C Difference (%): 10.099999999999994
Amount10.099999999999994
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium flexile / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium flexile / qualifier
 
16S Identity %: 23.779637377963738
Amount23.779637377963738
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium arcticum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium arcticum / qualifier
 
16S Identity %: 23.715693173821254
Amount23.715693173821254
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium movens / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium movens / qualifier
 
16S Identity %: 23.636363636363637
Amount23.636363636363637
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter crinale / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter crinale / qualifier
 
16S Identity %: 23.59472588480222
Amount23.59472588480222
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium formicicum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium formicicum / qualifier
 
16S Identity %: 23.555230431602048
Amount23.555230431602048
Unit1
Property / Comparison to close relatives: Methanobacterium formicicum / qualifier
 
POCPu: 2.433688815969374
Amount2.433688815969374
Unit1
Property / Comparison to close relatives: Methanobacterium formicicum / qualifier
 
G+C Difference (%): 6.5
Amount6.5
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / qualifier
 
16S Identity %: 23.47972972972973
Amount23.47972972972973
Unit1
Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / qualifier
 
POCPu: 2.6231419411250365
Amount2.6231419411250365
Unit1
Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / qualifier
 
G+C Difference (%): 11.519999999999996
Amount11.519999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter arboriphilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier
 
16S Identity %: 23.426294820717132
Amount23.426294820717132
Unit1
Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier
 
POCPu: 1.9553072625698324
Amount1.9553072625698324
Unit1
Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier
 
G+C Difference (%): 22.429999999999996
Amount22.429999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium espanolae / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium espanolae / qualifier
 
16S Identity %: 23.342736248236953
Amount23.342736248236953
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter filiformis / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier
 
16S Identity %: 23.28159645232816
Amount23.28159645232816
Unit1
Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier
 
POCPu: 2.054794520547945
Amount2.054794520547945
Unit1
Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier
 
G+C Difference (%): 20.88
Amount20.88
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter tenebrarum / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier
 
16S Identity %: 23.076923076923077
Amount23.076923076923077
Unit1
Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier
 
POCPu: 3.0386740331491713
Amount3.0386740331491713
Unit1
Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier
 
G+C Difference (%): 5.82
Amount5.82
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium aarhusense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium aarhusense / qualifier
 
16S Identity %: 22.978080120937264
Amount22.978080120937264
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter woesei / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier
 
16S Identity %: 22.532027128862094
Amount22.532027128862094
Unit1
Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier
 
POCPu: 2.2058823529411766
Amount2.2058823529411766
Unit1
Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier
 
G+C Difference (%): 17.97
Amount17.97
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium palustre / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium palustre / qualifier
 
16S Identity %: 22.507122507122507
Amount22.507122507122507
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter wolinii / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter wolinii / qualifier
 
16S Identity %: 21.902654867256636
Amount21.902654867256636
Unit1
Property / Comparison to close relatives: Methanobrevibacter wolinii / qualifier
 
POCPu: 2.093887200270179
Amount2.093887200270179
Unit1
Property / Comparison to close relatives: Methanobrevibacter wolinii / qualifier
 
G+C Difference (%): 23.699999999999996
Amount23.699999999999996
Unit1
Property / CAZyme
 
Property / CAZyme: GH51 / rank
 
Normal rank
Property / CAZyme: GH51 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH28 / rank
 
Normal rank
Property / CAZyme: GH28 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: GH130 / rank
 
Normal rank
Property / CAZyme: GH130 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH16 / rank
 
Normal rank
Property / CAZyme: GH16 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 18
Amount18
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 8
Amount8
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT81 / rank
 
Normal rank
Property / CAZyme: GT81 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: PL0 / rank
 
Normal rank
Property / CAZyme: PL0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE4 / rank
 
Normal rank
Property / CAZyme: CE4 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: CBM32 / rank
 
Normal rank
Property / CAZyme: CBM32 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: Arabinoxylan degradation / rank
 
Normal rank
Property / Pathway: Arabinoxylan degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Lactate production / rank
 
Normal rank
Property / Pathway: Lactate production / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 01:50, 19 August 2026

genome assembly
Language Label Description Also known as
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No label defined
    English
    GCA_018304465.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      26.230613621038433
      1.0041551246537395
      14.200000000000003
      0 references
      25.79453067257945
      2.0640788662969807
      0 references
      25.71428571428571
      1.9976218787158144
      10.479999999999997
      0 references
      0 references
      0 references
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      0 references
      24.29971988795518
      2.4515086206896552
      8.469999999999999
      0 references
      23.980815347721823
      1.915542011319112
      0 references
      23.92638036809816
      1.916741539383049
      0 references
      23.916292974588938
      1.844532279314888
      14.699999999999996
      0 references
      23.806129722024234
      2.2644674308079393
      14.469999999999999
      0 references
      23.78886478669559
      2.2614451185879756
      10.099999999999994
      0 references
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      23.555230431602048
      2.433688815969374
      0 references
      23.47972972972973
      2.6231419411250365
      11.519999999999996
      0 references
      23.426294820717132
      1.9553072625698324
      22.429999999999996
      0 references
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      23.28159645232816
      2.054794520547945
      0 references
      23.076923076923077
      3.0386740331491713
      0 references
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      22.532027128862094
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      21.902654867256636
      2.093887200270179
      23.699999999999996
      0 references
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