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GCF_000328665.1 (Q175618): Difference between revisions

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Added qualifier: G+C Difference (%) (P22): 1.1099999999999994
Added qualifier: Ecosystem (P27): Generic (Q43559)
 
(367 intermediate revisions by the same user not shown)
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus psychrotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
16S Identity %: 94.44444444444444
Amount94.44444444444444
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
POCPu: 57.48663101604278
Amount57.48663101604278
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
G+C Difference (%): 0.5399999999999991
Amount0.5399999999999991
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus sediminis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
16S Identity %: 94.43312966734555
Amount94.43312966734555
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
POCPu: 57.8086825784627
Amount57.8086825784627
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
G+C Difference (%): 0.9299999999999997
Amount0.9299999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus mangrovi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
16S Identity %: 94.36906377204885
Amount94.36906377204885
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
POCPu: 60.98462735940845
Amount60.98462735940845
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
G+C Difference (%): 0.259999999999998
Amount0.259999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides alaskense / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
16S Identity %: 94.36722750548647
Amount94.36722750548647
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
POCPu: 53.539381854436684
Amount53.539381854436684
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
G+C Difference (%): 0.17999999999999972
Amount0.17999999999999972
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus profundi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
16S Identity %: 94.08410548823949
Amount94.08410548823949
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
POCPu: 56.11692529772645
Amount56.11692529772645
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
G+C Difference (%): 0.7000000000000028
Amount0.7000000000000028
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus mahii / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
16S Identity %: 94.02985074626866
Amount94.02985074626866
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
POCPu: 52.50915356450571
Amount52.50915356450571
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
G+C Difference (%): 0.75
Amount0.75
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus portucalensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus portucalensis / qualifier
 
16S Identity %: 93.87417218543047
Amount93.87417218543047
Unit1
Property / Comparison to close relatives: Methanohalophilus portucalensis / qualifier
 
POCPu: 51.15003165224731
Amount51.15003165224731
Unit1
Property / Comparison to close relatives: Methanohalophilus portucalensis / qualifier
 
G+C Difference (%): 0.07000000000000028
Amount0.07000000000000028
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus halophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
16S Identity %: 93.79686434901159
Amount93.79686434901159
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
POCPu: 51.520342612419704
Amount51.520342612419704
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
G+C Difference (%): 0.5300000000000011
Amount0.5300000000000011
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina subterranea / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina subterranea / qualifier
 
16S Identity %: 93.68932038834951
Amount93.68932038834951
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum zhilinae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
16S Identity %: 93.60955056179775
Amount93.60955056179775
Unit1
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
POCPu: 51.08392358875295
Amount51.08392358875295
Unit1
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
G+C Difference (%): 2.710000000000001
Amount2.710000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus bombayensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
16S Identity %: 93.60108917631041
Amount93.60108917631041
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
POCPu: 57.7951609969074
Amount57.7951609969074
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
G+C Difference (%): 2.1499999999999986
Amount2.1499999999999986
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus taylorii / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus taylorii / qualifier
 
16S Identity %: 93.44608879492601
Amount93.44608879492601
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus levihalophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
16S Identity %: 93.42585829072316
Amount93.42585829072316
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
POCPu: 49.0216271884655
Amount49.0216271884655
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
G+C Difference (%): 0.6500000000000057
Amount0.6500000000000057
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina vacuolata / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
16S Identity %: 93.26530612244898
Amount93.26530612244898
Unit1
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
POCPu: 41.03329145728643
Amount41.03329145728643
Unit1
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
G+C Difference (%): 2.1599999999999966
Amount2.1599999999999966
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina mazei / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina mazei / qualifier
 
16S Identity %: 93.15274642588413
Amount93.15274642588413
Unit1
Property / Comparison to close relatives: Methanosarcina mazei / qualifier
 
POCPu: 42.69789983844911
Amount42.69789983844911
Unit1
Property / Comparison to close relatives: Methanosarcina mazei / qualifier
 
G+C Difference (%): 0.44999999999999574
Amount0.44999999999999574
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina barkeri / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina barkeri / qualifier
 
16S Identity %: 93.11079545454545
Amount93.11079545454545
Unit1
Property / Comparison to close relatives: Methanosarcina barkeri / qualifier
 
POCPu: 40.33106435643564
Amount40.33106435643564
Unit1
Property / Comparison to close relatives: Methanosarcina barkeri / qualifier
 
G+C Difference (%): 2.6799999999999997
Amount2.6799999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina soligelidi / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina soligelidi / qualifier
 
16S Identity %: 93.02848575712144
Amount93.02848575712144
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina siciliae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
16S Identity %: 92.98842750170184
Amount92.98842750170184
Unit1
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
POCPu: 40.37592889406965
Amount40.37592889406965
Unit1
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
G+C Difference (%): 1.0700000000000003
Amount1.0700000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina acetivorans / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina acetivorans / qualifier
 
16S Identity %: 92.98737727910238
Amount92.98737727910238
Unit1
Property / Comparison to close relatives: Methanosarcina acetivorans / qualifier
 
POCPu: 37.54656732304417
Amount37.54656732304417
Unit1
Property / Comparison to close relatives: Methanosarcina acetivorans / qualifier
 
G+C Difference (%): 0.8100000000000023
Amount0.8100000000000023
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina flavescens / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina flavescens / qualifier
 
16S Identity %: 92.95874822190612
Amount92.95874822190612
Unit1
Property / Comparison to close relatives: Methanosarcina flavescens / qualifier
 
POCPu: 45.537841304746195
Amount45.537841304746195
Unit1
Property / Comparison to close relatives: Methanosarcina flavescens / qualifier
 
G+C Difference (%): 0.5599999999999952
Amount0.5599999999999952
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina baltica / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina baltica / qualifier
 
16S Identity %: 92.77566539923954
Amount92.77566539923954
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina lacustris / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina lacustris / qualifier
 
16S Identity %: 92.74310595065312
Amount92.74310595065312
Unit1
Property / Comparison to close relatives: Methanosarcina lacustris / qualifier
 
POCPu: 44.28782166857892
Amount44.28782166857892
Unit1
Property / Comparison to close relatives: Methanosarcina lacustris / qualifier
 
G+C Difference (%): 0.04999999999999716
Amount0.04999999999999716
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina spelaei / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina spelaei / qualifier
 
16S Identity %: 92.70290394638869
Amount92.70290394638869
Unit1
Property / Comparison to close relatives: Methanosarcina spelaei / qualifier
 
POCPu: 38.11626195732156
Amount38.11626195732156
Unit1
Property / Comparison to close relatives: Methanosarcina spelaei / qualifier
 
G+C Difference (%): 3.1199999999999974
Amount3.1199999999999974
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina semesiae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina semesiae / qualifier
 
16S Identity %: 92.68461007591442
Amount92.68461007591442
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus vulcani / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
16S Identity %: 92.67089499647639
Amount92.67089499647639
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
POCPu: 57.26986478977588
Amount57.26986478977588
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
G+C Difference (%): 1.6699999999999946
Amount1.6699999999999946
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum natronophilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
16S Identity %: 92.6002766251729
Amount92.6002766251729
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
POCPu: 45.71925249891351
Amount45.71925249891351
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
G+C Difference (%): 7.529999999999994
Amount7.529999999999994
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina horonobensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina horonobensis / qualifier
 
16S Identity %: 92.23233030090972
Amount92.23233030090972
Unit1
Property / Comparison to close relatives: Methanosarcina horonobensis / qualifier
 
POCPu: 40.27245636441039
Amount40.27245636441039
Unit1
Property / Comparison to close relatives: Methanosarcina horonobensis / qualifier
 
G+C Difference (%): 0.5599999999999952
Amount0.5599999999999952
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalobium evestigatum / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
16S Identity %: 92.00273410799727
Amount92.00273410799727
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
POCPu: 47.97458300238284
Amount47.97458300238284
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
G+C Difference (%): 5.449999999999996
Amount5.449999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina thermophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina thermophila / qualifier
 
16S Identity %: 91.99438202247191
Amount91.99438202247191
Unit1
Property / Comparison to close relatives: Methanosarcina thermophila / qualifier
 
POCPu: 46.322290847838296
Amount46.322290847838296
Unit1
Property / Comparison to close relatives: Methanosarcina thermophila / qualifier
 
G+C Difference (%): 0.7199999999999989
Amount0.7199999999999989
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus tindarius / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus tindarius / qualifier
 
16S Identity %: 91.56118143459916
Amount91.56118143459916
Unit1
Property / Comparison to close relatives: Methanolobus tindarius / qualifier
 
POCPu: 54.45757250268528
Amount54.45757250268528
Unit1
Property / Comparison to close relatives: Methanolobus tindarius / qualifier
 
G+C Difference (%): 2.0799999999999983
Amount2.0799999999999983
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix harundinacea / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
16S Identity %: 89.99258710155671
Amount89.99258710155671
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
POCPu: 23.842500989315393
Amount23.842500989315393
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
G+C Difference (%): 13.630000000000003
Amount13.630000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanimicrococcus blatticola / rank
 
Normal rank
Property / Comparison to close relatives: Methanimicrococcus blatticola / qualifier
 
16S Identity %: 89.01174844505874
Amount89.01174844505874
Unit1
Property / Comparison to close relatives: Methanimicrococcus blatticola / qualifier
 
POCPu: 30.515759312320917
Amount30.515759312320917
Unit1
Property / Comparison to close relatives: Methanimicrococcus blatticola / qualifier
 
G+C Difference (%): 0.10999999999999943
Amount0.10999999999999943
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methermicoccus shengliensis / rank
 
Normal rank
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
16S Identity %: 88.77245508982035
Amount88.77245508982035
Unit1
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
POCPu: 23.738802451673738
Amount23.738802451673738
Unit1
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
G+C Difference (%): 12.700000000000003
Amount12.700000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix soehngenii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
16S Identity %: 87.21088435374149
Amount87.21088435374149
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
POCPu: 21.514084507042252
Amount21.514084507042252
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
G+C Difference (%): 9.120000000000005
Amount9.120000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix thermoacetophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
16S Identity %: 86.67573079537729
Amount86.67573079537729
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
POCPu: 24.268347591175147
Amount24.268347591175147
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
G+C Difference (%): 11.68
Amount11.68
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocella arvoryzae / rank
 
Normal rank
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
16S Identity %: 84.48979591836735
Amount84.48979591836735
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
POCPu: 18.159679944338144
Amount18.159679944338144
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
G+C Difference (%): 12.730000000000004
Amount12.730000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosphaerula palustris / rank
 
Normal rank
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
16S Identity %: 84.06292749658003
Amount84.06292749658003
Unit1
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
POCPu: 14.914063943818148
Amount14.914063943818148
Unit1
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
G+C Difference (%): 13.480000000000004
Amount13.480000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoregula boonei / rank
 
Normal rank
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
16S Identity %: 83.81742738589212
Amount83.81742738589212
Unit1
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
POCPu: 14.457364341085272
Amount14.457364341085272
Unit1
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
G+C Difference (%): 12.64
Amount12.64
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanogenium frigidum / rank
 
Normal rank
Property / Comparison to close relatives: Methanogenium frigidum / qualifier
 
16S Identity %: 83.76712328767123
Amount83.76712328767123
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus marisnigri / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
16S Identity %: 83.34470989761093
Amount83.34470989761093
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
POCPu: 16.135341286915704
Amount16.135341286915704
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
G+C Difference (%): 20.190000000000005
Amount20.190000000000005
Unit1
Property / Carbon source
 
Property / Carbon source: starch / rank
 
Normal rank
Property / CAZyme
 
Property / CAZyme: GH46 / rank
 
Normal rank
Property / CAZyme: GH46 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: GH39 / rank
 
Normal rank
Property / CAZyme: GH39 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: GH6 / rank
 
Normal rank
Property / CAZyme: GH6 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH133 / rank
 
Normal rank
Property / CAZyme: GH133 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH15 / rank
 
Normal rank
Property / CAZyme: GH15 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH71 / rank
 
Normal rank
Property / CAZyme: GH71 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH57 / rank
 
Normal rank
Property / CAZyme: GH57 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH19 / rank
 
Normal rank
Property / CAZyme: GH19 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH109 / rank
 
Normal rank
Property / CAZyme: GH109 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH43 / rank
 
Normal rank
Property / CAZyme: GH43 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH23 / rank
 
Normal rank
Property / CAZyme: GH23 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT13 / rank
 
Normal rank
Property / CAZyme: GT13 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 22
Amount22
Unit1
Property / CAZyme
 
Property / CAZyme: GT3 / rank
 
Normal rank
Property / CAZyme: GT3 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT35 / rank
 
Normal rank
Property / CAZyme: GT35 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT22 / rank
 
Normal rank
Property / CAZyme: GT22 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 15
Amount15
Unit1
Property / CAZyme
 
Property / CAZyme: GT0 / rank
 
Normal rank
Property / CAZyme: GT0 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT20 / rank
 
Normal rank
Property / CAZyme: GT20 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE9 / rank
 
Normal rank
Property / CAZyme: CE9 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE14 / rank
 
Normal rank
Property / CAZyme: CE14 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM12 / rank
 
Normal rank
Property / CAZyme: CBM12 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 12
Amount12
Unit1
Property / CAZyme
 
Property / CAZyme: CBM5 / rank
 
Normal rank
Property / CAZyme: CBM5 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: CBM6 / rank
 
Normal rank
Property / CAZyme: CBM6 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / Pathway
 
Property / Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate / rank
 
Normal rank
Property / Pathway: Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate / qualifier
 
Property / Pathway
 
Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank
 
Normal rank
Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier
 
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Proline biosynthesis, glutamate => proline / rank
 
Normal rank
Property / Pathway: Proline biosynthesis, glutamate => proline / qualifier
 
Property / Pathway
 
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank
 
Normal rank
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: V/A-type ATPase, prokaryotes / rank
 
Normal rank
Property / Pathway: V/A-type ATPase, prokaryotes / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: C10-C20 isoprenoid biosynthesis, bacteria / rank
 
Normal rank
Property / Pathway: C10-C20 isoprenoid biosynthesis, bacteria / qualifier
 
Property / Pathway
 
Property / Pathway: C10-C20 isoprenoid biosynthesis, archaea / rank
 
Normal rank
Property / Pathway: C10-C20 isoprenoid biosynthesis, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: F420 biosynthesis, archaea / rank
 
Normal rank
Property / Pathway: F420 biosynthesis, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: 2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate / rank
 
Normal rank
Property / Pathway: 2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme F430 biosynthesis, sirohydrochlorin => coenzyme F430 / rank
 
Normal rank
Property / Pathway: Coenzyme F430 biosynthesis, sirohydrochlorin => coenzyme F430 / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Heme biosynthesis, archaea, siroheme => heme / rank
 
Normal rank
Property / Pathway: Heme biosynthesis, archaea, siroheme => heme / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine salvage pathway, HMP/HET => TMP / rank
 
Normal rank
Property / Pathway: Thiamine salvage pathway, HMP/HET => TMP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank
 
Normal rank
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: Methanofuran biosynthesis / rank
 
Normal rank
Property / Pathway: Methanofuran biosynthesis / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA / rank
 
Normal rank
Property / Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / rank
 
Normal rank
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / rank
 
Normal rank
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank
 
Normal rank
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier
 
Property / Pathway
 
Property / Pathway: De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP / rank
 
Normal rank
Property / Pathway: De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, methanol => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, methanol => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, methylamine/dimethylamine/trimethylamine => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, methylamine/dimethylamine/trimethylamine => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, CO2 => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, CO2 => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, acetate => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, acetate => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamine degradation II / rank
 
Normal rank
Property / Pathway: Glutamine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Acetate to acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetate to acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Methanol conversion / rank
 
Normal rank
Property / Pathway: Methanol conversion / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis from carbon dioxide / rank
 
Normal rank
Property / Pathway: Methanogenesis from carbon dioxide / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 1.8
Amount1.8
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.13
Amount0.13
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.6
Amount0.6
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.06
Amount0.06
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 14.5
Amount14.5
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 5.2
Amount5.2
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.18
Amount0.18
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.04
Amount0.04
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0.9
Amount0.9
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.06
Amount0.06
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: GCA_002508385.1_ASM250838v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_002508385.1_ASM250838v1_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_002503365.1_ASM250336v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_002503365.1_ASM250336v1_genomic.fna / qualifier
 

Latest revision as of 17:42, 18 August 2026

genome assembly
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    English
    GCF_000328665.1
    genome assembly

      Statements

      no current description - please contribute here
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