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GCF_000300255.2 (Q170823): Difference between revisions

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Added qualifier: 16S Identity % (P3): 77.78537252221463
Added qualifier: Ecosystem (P27): Pig (Q65928)
 
(324 intermediate revisions by the same user not shown)
Property / Comparison to close relatives: Methanococcoides burtonii / qualifier
 
POCPu: 6.139731827805223
Amount6.139731827805223
Unit1
Property / Comparison to close relatives: Methanococcoides burtonii / qualifier
 
G+C Difference (%): 14.830000000000005
Amount14.830000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus mangrovi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
16S Identity %: 77.59562841530054
Amount77.59562841530054
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
POCPu: 6.275645667390779
Amount6.275645667390779
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
G+C Difference (%): 13.980000000000004
Amount13.980000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus zinderi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
16S Identity %: 77.56497948016415
Amount77.56497948016415
Unit1
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
POCPu: 5.983701979045401
Amount5.983701979045401
Unit1
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
G+C Difference (%): 11.530000000000001
Amount11.530000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermogymnomonas acidicola / rank
 
Normal rank
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
16S Identity %: 77.52562225475842
Amount77.52562225475842
Unit1
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
POCPu: 5.751848808545604
Amount5.751848808545604
Unit1
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
G+C Difference (%): 0.8399999999999963
Amount0.8399999999999963
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus sediminis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
16S Identity %: 77.45901639344262
Amount77.45901639344262
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
POCPu: 5.965317919075145
Amount5.965317919075145
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
G+C Difference (%): 14.650000000000006
Amount14.650000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Acidiplasma aeolicum / rank
 
Normal rank
Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier
 
16S Identity %: 77.32035928143712
Amount77.32035928143712
Unit1
Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier
 
POCPu: 4.293588627792283
Amount4.293588627792283
Unit1
Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier
 
G+C Difference (%): 21.610000000000007
Amount21.610000000000007
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus chelungpuianus / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
16S Identity %: 77.3076923076923
Amount77.3076923076923
Unit1
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
POCPu: 6.392694063926941
Amount6.392694063926941
Unit1
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
G+C Difference (%): 7.440000000000005
Amount7.440000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Picrophilus torridus / rank
 
Normal rank
Property / Comparison to close relatives: Picrophilus torridus / qualifier
 
16S Identity %: 77.28836889194768
Amount77.28836889194768
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolinea tarda / rank
 
Normal rank
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
16S Identity %: 77.2249474421864
Amount77.2249474421864
Unit1
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
POCPu: 4.57516339869281
Amount4.57516339869281
Unit1
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
G+C Difference (%): 0.7600000000000051
Amount0.7600000000000051
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Picrophilus oshimae / rank
 
Normal rank
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
16S Identity %: 77.1701982228298
Amount77.1701982228298
Unit1
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
POCPu: 5.058969584109249
Amount5.058969584109249
Unit1
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
G+C Difference (%): 19.610000000000007
Amount19.610000000000007
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosphaerula palustris / rank
 
Normal rank
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
16S Identity %: 77.12912087912088
Amount77.12912087912088
Unit1
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
POCPu: 5.322763306908267
Amount5.322763306908267
Unit1
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
G+C Difference (%): 0.240000000000002
Amount0.240000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides alaskense / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
16S Identity %: 77.08179808400885
Amount77.08179808400885
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
POCPu: 6.618561831301319
Amount6.618561831301319
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
G+C Difference (%): 13.900000000000006
Amount13.900000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoregula boonei / rank
 
Normal rank
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
16S Identity %: 76.94444444444444
Amount76.94444444444444
Unit1
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
POCPu: 5.811719500480307
Amount5.811719500480307
Unit1
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
G+C Difference (%): 1.0800000000000054
Amount1.0800000000000054
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Acidiplasma cupricumulans / rank
 
Normal rank
Property / Comparison to close relatives: Acidiplasma cupricumulans / qualifier
 
16S Identity %: 76.89631176061239
Amount76.89631176061239
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina semesiae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina semesiae / qualifier
 
16S Identity %: 76.85892981236971
Amount76.85892981236971
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus bombayensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
16S Identity %: 76.84931506849315
Amount76.84931506849315
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
POCPu: 6.10975338813597
Amount6.10975338813597
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
G+C Difference (%): 15.870000000000005
Amount15.870000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus levihalophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
16S Identity %: 76.83284457478005
Amount76.83284457478005
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
POCPu: 6.737496760818865
Amount6.737496760818865
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
G+C Difference (%): 13.07
Amount13.07
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalobium evestigatum / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
16S Identity %: 76.8066070199587
Amount76.8066070199587
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
POCPu: 5.9405940594059405
Amount5.9405940594059405
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
G+C Difference (%): 19.17
Amount19.17
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans hollandica / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
16S Identity %: 76.78943710910355
Amount76.78943710910355
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
POCPu: 6.365551135033934
Amount6.365551135033934
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
G+C Difference (%): 13.720000000000006
Amount13.720000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus halotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
16S Identity %: 76.77419354838709
Amount76.77419354838709
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
POCPu: 5.795373241116146
Amount5.795373241116146
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
G+C Difference (%): 12.010000000000005
Amount12.010000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocella arvoryzae / rank
 
Normal rank
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
16S Identity %: 76.69172932330827
Amount76.69172932330827
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
POCPu: 5.743740795287187
Amount5.743740795287187
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
G+C Difference (%): 0.990000000000002
Amount0.990000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus profundi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
16S Identity %: 76.6857962697274
Amount76.6857962697274
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
POCPu: 5.829300483941927
Amount5.829300483941927
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
G+C Difference (%): 13.020000000000003
Amount13.020000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum natronophilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
16S Identity %: 76.67130919220055
Amount76.67130919220055
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
POCPu: 6.821963394342761
Amount6.821963394342761
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
G+C Difference (%): 21.25
Amount21.25
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix soehngenii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
16S Identity %: 76.57103825136612
Amount76.57103825136612
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
POCPu: 5.145175064047822
Amount5.145175064047822
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
G+C Difference (%): 4.600000000000001
Amount4.600000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Ferroplasma acidiphilum / rank
 
Normal rank
Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier
 
16S Identity %: 76.53203342618384
Amount76.53203342618384
Unit1
Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier
 
POCPu: 4.588744588744588
Amount4.588744588744588
Unit1
Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier
 
G+C Difference (%): 19.1
Amount19.1
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans uponensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans uponensis / qualifier
 
16S Identity %: 76.48766328011611
Amount76.48766328011611
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus psychrotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
16S Identity %: 76.48745519713262
Amount76.48745519713262
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
POCPu: 5.808409189423494
Amount5.808409189423494
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
G+C Difference (%): 14.260000000000005
Amount14.260000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus mahii / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
16S Identity %: 76.4344262295082
Amount76.4344262295082
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
POCPu: 6.279133534411846
Amount6.279133534411846
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
G+C Difference (%): 12.970000000000006
Amount12.970000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus thermophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
16S Identity %: 76.36867636867638
Amount76.36867636867638
Unit1
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
POCPu: 6.606683804627249
Amount6.606683804627249
Unit1
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
G+C Difference (%): 3.729999999999997
Amount3.729999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus halophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
16S Identity %: 76.25257378174331
Amount76.25257378174331
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
POCPu: 6.396298312465977
Amount6.396298312465977
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
G+C Difference (%): 13.190000000000005
Amount13.190000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus taiwanensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus taiwanensis / qualifier
 
16S Identity %: 76.19047619047619
Amount76.19047619047619
Unit1
Property / Comparison to close relatives: Methanoculleus taiwanensis / qualifier
 
POCPu: 5.826369545032498
Amount5.826369545032498
Unit1
Property / Comparison to close relatives: Methanoculleus taiwanensis / qualifier
 
G+C Difference (%): 4.3799999999999955
Amount4.3799999999999955
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina subterranea / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina subterranea / qualifier
 
16S Identity %: 76.18715083798882
Amount76.18715083798882
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus marisnigri / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
16S Identity %: 76.14804660726526
Amount76.14804660726526
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
POCPu: 6.120961865435997
Amount6.120961865435997
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
G+C Difference (%): 6.469999999999999
Amount6.469999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina siciliae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
16S Identity %: 76.01096641535298
Amount76.01096641535298
Unit1
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
POCPu: 5.011078915970684
Amount5.011078915970684
Unit1
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
G+C Difference (%): 12.650000000000006
Amount12.650000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanospirillum hungatei / rank
 
Normal rank
Property / Comparison to close relatives: Methanospirillum hungatei / qualifier
 
16S Identity %: 76.01096641535298
Amount76.01096641535298
Unit1
Property / Comparison to close relatives: Methanospirillum hungatei / qualifier
 
POCPu: 4.8316831683168315
Amount4.8316831683168315
Unit1
Property / Comparison to close relatives: Methanospirillum hungatei / qualifier
 
G+C Difference (%): 10.440000000000005
Amount10.440000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix thermoacetophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
16S Identity %: 76.0082023239918
Amount76.0082023239918
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
POCPu: 7.370864770748694
Amount7.370864770748694
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
G+C Difference (%): 2.0400000000000063
Amount2.0400000000000063
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus chikugoensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus chikugoensis / qualifier
 
16S Identity %: 75.98314606741573
Amount75.98314606741573
Unit1
Property / Comparison to close relatives: Methanoculleus chikugoensis / qualifier
 
POCPu: 5.801562869997632
Amount5.801562869997632
Unit1
Property / Comparison to close relatives: Methanoculleus chikugoensis / qualifier
 
G+C Difference (%): 6.269999999999996
Amount6.269999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methermicoccus shengliensis / rank
 
Normal rank
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
16S Identity %: 75.91623036649214
Amount75.91623036649214
Unit1
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
POCPu: 8.102279728897104
Amount8.102279728897104
Unit1
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
G+C Difference (%): 1.0200000000000031
Amount1.0200000000000031
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus hydrogenitrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus hydrogenitrophicus / qualifier
 
16S Identity %: 75.84033613445378
Amount75.84033613445378
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina vacuolata / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
16S Identity %: 75.82191780821917
Amount75.82191780821917
Unit1
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
POCPu: 5.6217423678332095
Amount5.6217423678332095
Unit1
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
G+C Difference (%): 15.880000000000003
Amount15.880000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus vulcani / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
16S Identity %: 75.60283687943262
Amount75.60283687943262
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
POCPu: 6.041335453100159
Amount6.041335453100159
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
G+C Difference (%): 15.39
Amount15.39
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
16S Identity %: 75.56935817805382
Amount75.56935817805382
Unit1
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
POCPu: 6.110776640577965
Amount6.110776640577965
Unit1
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
G+C Difference (%): 22.700000000000003
Amount22.700000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermococcus okinawensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
16S Identity %: 75.564681724846
Amount75.564681724846
Unit1
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
POCPu: 6.361708573159648
Amount6.361708573159648
Unit1
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
G+C Difference (%): 26.310000000000002
Amount26.310000000000002
Unit1
Property / CAZyme
 
Property / CAZyme: GH28 / rank
 
Normal rank
Property / CAZyme: GH28 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH43 / rank
 
Normal rank
Property / CAZyme: GH43 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH19 / rank
 
Normal rank
Property / CAZyme: GH19 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT7 / rank
 
Normal rank
Property / CAZyme: GT7 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT13 / rank
 
Normal rank
Property / CAZyme: GT13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 15
Amount15
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 9
Amount9
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT29 / rank
 
Normal rank
Property / CAZyme: GT29 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT8 / rank
 
Normal rank
Property / CAZyme: GT8 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE14 / rank
 
Normal rank
Property / CAZyme: CE14 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE4 / rank
 
Normal rank
Property / CAZyme: CE4 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: CBM13 / rank
 
Normal rank
Property / CAZyme: CBM13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM5 / rank
 
Normal rank
Property / CAZyme: CBM5 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Proline biosynthesis, glutamate => proline / rank
 
Normal rank
Property / Pathway: Proline biosynthesis, glutamate => proline / qualifier
 
Property / Pathway
 
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: C10-C20 isoprenoid biosynthesis, bacteria / rank
 
Normal rank
Property / Pathway: C10-C20 isoprenoid biosynthesis, bacteria / qualifier
 
Property / Pathway
 
Property / Pathway: C10-C20 isoprenoid biosynthesis, archaea / rank
 
Normal rank
Property / Pathway: C10-C20 isoprenoid biosynthesis, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha / rank
 
Normal rank
Property / Pathway: dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine salvage pathway, HMP/HET => TMP / rank
 
Normal rank
Property / Pathway: Thiamine salvage pathway, HMP/HET => TMP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank
 
Normal rank
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / rank
 
Normal rank
Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / rank
 
Normal rank
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / rank
 
Normal rank
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / qualifier
 
Property / Pathway
 
Property / Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea / rank
 
Normal rank
Property / Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Tryptophan biosynthesis, chorismate => tryptophan / rank
 
Normal rank
Property / Pathway: Tryptophan biosynthesis, chorismate => tryptophan / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine degradation I / rank
 
Normal rank
Property / Pathway: Cysteine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Methanol conversion / rank
 
Normal rank
Property / Pathway: Methanol conversion / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.04
Amount0.04
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 8.7
Amount8.7
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 8.8
Amount8.8
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 1
Amount1
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / MAGs
 
Property / MAGs: CosteaPI_2017__mickey2-11-30-0__bin_69.fa / rank
 
Normal rank
Property / MAGs: CosteaPI_2017__mickey2-11-30-0__bin_69.fa / qualifier
 
Property / MAGs
 
Property / MAGs: PIGvsB100pB20.1639.fa / rank
 
Normal rank
Property / MAGs: PIGvsB100pB20.1639.fa / qualifier
 

Latest revision as of 09:18, 18 August 2026

genome assembly
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    English
    GCF_000300255.2
    genome assembly

      Statements

      no current description - please contribute here
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