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GCA_017608625.1 (Q168105): Difference between revisions

From wikibase
Added qualifier: 16S Identity % (P3): 72.77091906721537
 
(145 intermediate revisions by the same user not shown)
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
POCPu: 2.133217239878102
Amount2.133217239878102
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
G+C Difference (%): 14.8
Amount14.8
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermogymnomonas acidicola / rank
 
Normal rank
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
16S Identity %: 72.19369038884813
Amount72.19369038884813
Unit1
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
POCPu: 2.147006819904016
Amount2.147006819904016
Unit1
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
G+C Difference (%): 25.24
Amount25.24
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Picrophilus oshimae / rank
 
Normal rank
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
16S Identity %: 71.60493827160494
Amount71.60493827160494
Unit1
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
POCPu: 1.9455252918287937
Amount1.9455252918287937
Unit1
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
G+C Difference (%): 4.789999999999996
Amount4.789999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Nitrosopumilus maritimus / rank
 
Normal rank
Property / Comparison to close relatives: Nitrosopumilus maritimus / qualifier
 
16S Identity %: 71.58920539730134
Amount71.58920539730134
Unit1
Property / Comparison to close relatives: Nitrosopumilus maritimus / qualifier
 
POCPu: 1.3089005235602094
Amount1.3089005235602094
Unit1
Property / Comparison to close relatives: Nitrosopumilus maritimus / qualifier
 
G+C Difference (%): 2.9800000000000004
Amount2.9800000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Nitrososphaera viennensis / rank
 
Normal rank
Property / Comparison to close relatives: Nitrososphaera viennensis / qualifier
 
16S Identity %: 71.51681537405628
Amount71.51681537405628
Unit1
Property / Comparison to close relatives: Nitrososphaera viennensis / qualifier
 
POCPu: 1.2292891501870657
Amount1.2292891501870657
Unit1
Property / Comparison to close relatives: Nitrososphaera viennensis / qualifier
 
G+C Difference (%): 21.529999999999998
Amount21.529999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Nitrosarchaeum koreense / rank
 
Normal rank
Property / Comparison to close relatives: Nitrosarchaeum koreense / qualifier
 
16S Identity %: 71.37546468401487
Amount71.37546468401487
Unit1
Property / Comparison to close relatives: Nitrosarchaeum koreense / qualifier
 
POCPu: 1.4328808446455505
Amount1.4328808446455505
Unit1
Property / Comparison to close relatives: Nitrosarchaeum koreense / qualifier
 
G+C Difference (%): 1.4800000000000004
Amount1.4800000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Picrophilus torridus / rank
 
Normal rank
Property / Comparison to close relatives: Picrophilus torridus / qualifier
 
16S Identity %: 71.33977900552486
Amount71.33977900552486
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Nitrosopumilus zosterae / rank
 
Normal rank
Property / Comparison to close relatives: Nitrosopumilus zosterae / qualifier
 
16S Identity %: 71.24137931034483
Amount71.24137931034483
Unit1
Property / Comparison to close relatives: Nitrosopumilus zosterae / qualifier
 
POCPu: 1.5878616796047988
Amount1.5878616796047988
Unit1
Property / Comparison to close relatives: Nitrosopumilus zosterae / qualifier
 
G+C Difference (%): 2.7199999999999953
Amount2.7199999999999953
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Nitrosopumilus ureiphilus / rank
 
Normal rank
Property / Comparison to close relatives: Nitrosopumilus ureiphilus / qualifier
 
16S Identity %: 71.22252747252747
Amount71.22252747252747
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Nitrosopumilus piranensis / rank
 
Normal rank
Property / Comparison to close relatives: Nitrosopumilus piranensis / qualifier
 
16S Identity %: 71.01648351648352
Amount71.01648351648352
Unit1
Property / Comparison to close relatives: Nitrosopumilus piranensis / qualifier
 
POCPu: 1.2539184952978055
Amount1.2539184952978055
Unit1
Property / Comparison to close relatives: Nitrosopumilus piranensis / qualifier
 
G+C Difference (%): 2.629999999999999
Amount2.629999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Nitrosopumilus oxyclinae / rank
 
Normal rank
Property / Comparison to close relatives: Nitrosopumilus oxyclinae / qualifier
 
16S Identity %: 71.01648351648352
Amount71.01648351648352
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Nitrosopumilus adriaticus / rank
 
Normal rank
Property / Comparison to close relatives: Nitrosopumilus adriaticus / qualifier
 
16S Identity %: 71.01648351648352
Amount71.01648351648352
Unit1
Property / Comparison to close relatives: Nitrosopumilus adriaticus / qualifier
 
POCPu: 1.3959822948586993
Amount1.3959822948586993
Unit1
Property / Comparison to close relatives: Nitrosopumilus adriaticus / qualifier
 
G+C Difference (%): 2.2199999999999953
Amount2.2199999999999953
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Nitrosopumilus cobalaminigenes / rank
 
Normal rank
Property / Comparison to close relatives: Nitrosopumilus cobalaminigenes / qualifier
 
16S Identity %: 70.81043956043956
Amount70.81043956043956
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Sulfurihydrogenibium yellowstonense / rank
 
Normal rank
Property / Comparison to close relatives: Sulfurihydrogenibium yellowstonense / qualifier
 
16S Identity %: 66.59663865546219
Amount66.59663865546219
Unit1
Property / Comparison to close relatives: Sulfurihydrogenibium yellowstonense / qualifier
 
POCPu: 0.46253469010175763
Amount0.46253469010175763
Unit1
Property / Comparison to close relatives: Sulfurihydrogenibium yellowstonense / qualifier
 
G+C Difference (%): 1.629999999999999
Amount1.629999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Sulfurihydrogenibium subterraneum / rank
 
Normal rank
Property / Comparison to close relatives: Sulfurihydrogenibium subterraneum / qualifier
 
16S Identity %: 64.77850399419027
Amount64.77850399419027
Unit1
Property / Comparison to close relatives: Sulfurihydrogenibium subterraneum / qualifier
 
POCPu: 0.6628003314001657
Amount0.6628003314001657
Unit1
Property / Comparison to close relatives: Sulfurihydrogenibium subterraneum / qualifier
 
G+C Difference (%): 1.0999999999999979
Amount1.0999999999999979
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Sulfurihydrogenibium rodmanii / rank
 
Normal rank
Property / Comparison to close relatives: Sulfurihydrogenibium rodmanii / qualifier
 
16S Identity %: 64.45396145610277
Amount64.45396145610277
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Sulfurihydrogenibium azorense / rank
 
Normal rank
Property / Comparison to close relatives: Sulfurihydrogenibium azorense / qualifier
 
16S Identity %: 64.29080541696365
Amount64.29080541696365
Unit1
Property / Comparison to close relatives: Sulfurihydrogenibium azorense / qualifier
 
POCPu: 0.7777322963569382
Amount0.7777322963569382
Unit1
Property / Comparison to close relatives: Sulfurihydrogenibium azorense / qualifier
 
G+C Difference (%): 1.5599999999999987
Amount1.5599999999999987
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Sulfurihydrogenibium kristjanssonii / rank
 
Normal rank
Property / Comparison to close relatives: Sulfurihydrogenibium kristjanssonii / qualifier
 
16S Identity %: 64.05919661733616
Amount64.05919661733616
Unit1
Property / CAZyme
 
Property / CAZyme: GH3 / rank
 
Normal rank
Property / CAZyme: GH3 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH23 / rank
 
Normal rank
Property / CAZyme: GH23 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT3 / rank
 
Normal rank
Property / CAZyme: GT3 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 5
Amount5
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT9 / rank
 
Normal rank
Property / CAZyme: GT9 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM5 / rank
 
Normal rank
Property / CAZyme: CBM5 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM20 / rank
 
Normal rank
Property / CAZyme: CBM20 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Lactate production / rank
 
Normal rank
Property / Pathway: Lactate production / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 04:17, 18 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_017608625.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      76.32120796156487
      4.396092362344583
      1.1500000000000021
      0 references
      75.39410555174777
      6.451612903225806
      4.059999999999999
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      75.12093987560469
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      1.6999999999999993
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      74.86263736263736
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      74.46471054718478
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      74.24657534246575
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      3.110000000000003
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      73.07692307692307
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      2.200000000000003
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      73.06374228923922
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      71.60493827160494
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      0 references
      71.37546468401487
      1.4328808446455505
      1.4800000000000004
      0 references
      0 references
      71.24137931034483
      1.5878616796047988
      2.7199999999999953
      0 references
      0 references
      71.01648351648352
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      2.629999999999999
      0 references
      0 references
      71.01648351648352
      1.3959822948586993
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      66.59663865546219
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      0 references
      0 references
      64.29080541696365
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      1.5599999999999987
      0 references
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