Jump to content

GCA_017468935.1 (Q163609): Difference between revisions

From wikibase
Added qualifier: G+C Difference (%) (P22): 12.46
Added qualifier: Ecosystem (P27): Ruminants (Q62332)
 
(294 intermediate revisions by the same user not shown)
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus zinderi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
16S Identity %: 77.62619372442019
Amount77.62619372442019
Unit1
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
POCPu: 5.682839173405211
Amount5.682839173405211
Unit1
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
G+C Difference (%): 9.159999999999997
Amount9.159999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Acidiplasma cupricumulans / rank
 
Normal rank
Property / Comparison to close relatives: Acidiplasma cupricumulans / qualifier
 
16S Identity %: 77.53120665742024
Amount77.53120665742024
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus mangrovi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
16S Identity %: 77.45231607629428
Amount77.45231607629428
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
POCPu: 6.255813953488372
Amount6.255813953488372
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
G+C Difference (%): 11.61
Amount11.61
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides methylutens / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
16S Identity %: 77.3972602739726
Amount77.3972602739726
Unit1
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
POCPu: 5.809031044214487
Amount5.809031044214487
Unit1
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
G+C Difference (%): 10.719999999999999
Amount10.719999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus chelungpuianus / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
16S Identity %: 77.37730061349694
Amount77.37730061349694
Unit1
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
POCPu: 6.252894858730894
Amount6.252894858730894
Unit1
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
G+C Difference (%): 5.07
Amount5.07
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides orientis / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
16S Identity %: 77.31607629427792
Amount77.31607629427792
Unit1
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
POCPu: 5.8766859344894025
Amount5.8766859344894025
Unit1
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
G+C Difference (%): 10.54
Amount10.54
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans hollandica / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
16S Identity %: 77.23802914642609
Amount77.23802914642609
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
POCPu: 5.643340857787811
Amount5.643340857787811
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
G+C Difference (%): 11.350000000000001
Amount11.350000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix harundinacea / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
16S Identity %: 77.23214285714286
Amount77.23214285714286
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
POCPu: 5.575326215895611
Amount5.575326215895611
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
G+C Difference (%): 2.280000000000001
Amount2.280000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus sediminis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
16S Identity %: 77.04359673024524
Amount77.04359673024524
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
POCPu: 6.113342257920571
Amount6.113342257920571
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
G+C Difference (%): 12.280000000000001
Amount12.280000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Ferroplasma acidiphilum / rank
 
Normal rank
Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier
 
16S Identity %: 77.02984038861902
Amount77.02984038861902
Unit1
Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier
 
POCPu: 4.196576477084483
Amount4.196576477084483
Unit1
Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier
 
G+C Difference (%): 16.729999999999997
Amount16.729999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus halotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
16S Identity %: 77.02219040801718
Amount77.02219040801718
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
POCPu: 5.747126436781609
Amount5.747126436781609
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
G+C Difference (%): 9.64
Amount9.64
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methermicoccus shengliensis / rank
 
Normal rank
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
16S Identity %: 77.00976709241172
Amount77.00976709241172
Unit1
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
POCPu: 6.993828974434322
Amount6.993828974434322
Unit1
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
G+C Difference (%): 1.3500000000000014
Amount1.3500000000000014
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides alaskense / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
16S Identity %: 77.00220426157237
Amount77.00220426157237
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
POCPu: 6.082375478927203
Amount6.082375478927203
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
G+C Difference (%): 11.530000000000001
Amount11.530000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans thermophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans thermophila / qualifier
 
16S Identity %: 76.95139911634757
Amount76.95139911634757
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus mahii / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
16S Identity %: 76.83923705722071
Amount76.83923705722071
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
POCPu: 5.914826498422713
Amount5.914826498422713
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
G+C Difference (%): 10.600000000000001
Amount10.600000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus levihalophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
16S Identity %: 76.81584739545121
Amount76.81584739545121
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
POCPu: 6.175298804780876
Amount6.175298804780876
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
G+C Difference (%): 10.699999999999996
Amount10.699999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalobium evestigatum / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
16S Identity %: 76.80164722031572
Amount76.80164722031572
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
POCPu: 5.623064093400048
Amount5.623064093400048
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
G+C Difference (%): 16.799999999999997
Amount16.799999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus bombayensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
16S Identity %: 76.775956284153
Amount76.775956284153
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
POCPu: 5.7535422928295405
Amount5.7535422928295405
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
G+C Difference (%): 13.5
Amount13.5
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix soehngenii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
16S Identity %: 76.7394270122783
Amount76.7394270122783
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
POCPu: 4.854368932038835
Amount4.854368932038835
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
G+C Difference (%): 2.229999999999997
Amount2.229999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum natronophilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
16S Identity %: 76.73611111111111
Amount76.73611111111111
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
POCPu: 5.899548232792984
Amount5.899548232792984
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
G+C Difference (%): 18.879999999999995
Amount18.879999999999995
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus halophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
16S Identity %: 76.72826830937713
Amount76.72826830937713
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
POCPu: 6.108065779169929
Amount6.108065779169929
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
G+C Difference (%): 10.82
Amount10.82
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocella arvoryzae / rank
 
Normal rank
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
16S Identity %: 76.67121418826738
Amount76.67121418826738
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
POCPu: 5.621181262729124
Amount5.621181262729124
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
G+C Difference (%): 1.3800000000000026
Amount1.3800000000000026
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans uponensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans uponensis / qualifier
 
16S Identity %: 76.62807525325616
Amount76.62807525325616
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina semesiae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina semesiae / qualifier
 
16S Identity %: 76.57657657657657
Amount76.57657657657657
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermococcus okinawensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
16S Identity %: 76.57103825136612
Amount76.57103825136612
Unit1
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
POCPu: 5.292076344707923
Amount5.292076344707923
Unit1
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
G+C Difference (%): 23.939999999999998
Amount23.939999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolinea tarda / rank
 
Normal rank
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
16S Identity %: 76.5034965034965
Amount76.5034965034965
Unit1
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
POCPu: 4.4564291796764115
Amount4.4564291796764115
Unit1
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
G+C Difference (%): 1.6099999999999994
Amount1.6099999999999994
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus thermophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
16S Identity %: 76.417704011065
Amount76.417704011065
Unit1
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
POCPu: 6.27625401531999
Amount6.27625401531999
Unit1
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
G+C Difference (%): 6.100000000000001
Amount6.100000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus psychrotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
16S Identity %: 76.41172265904217
Amount76.41172265904217
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
POCPu: 5.659190945294487
Amount5.659190945294487
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
G+C Difference (%): 11.89
Amount11.89
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus profundi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
16S Identity %: 76.39484978540773
Amount76.39484978540773
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
POCPu: 5.677227301722305
Amount5.677227301722305
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
G+C Difference (%): 10.649999999999999
Amount10.649999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
16S Identity %: 76.2396694214876
Amount76.2396694214876
Unit1
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
POCPu: 5.633802816901409
Amount5.633802816901409
Unit1
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
G+C Difference (%): 20.33
Amount20.33
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanotorris formicicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
16S Identity %: 76.16120218579235
Amount76.16120218579235
Unit1
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
POCPu: 5.915267785771383
Amount5.915267785771383
Unit1
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
G+C Difference (%): 20.78
Amount20.78
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoregula boonei / rank
 
Normal rank
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
16S Identity %: 76.0914760914761
Amount76.0914760914761
Unit1
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
POCPu: 5.577412635963897
Amount5.577412635963897
Unit1
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
G+C Difference (%): 1.2899999999999991
Amount1.2899999999999991
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina vacuolata / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
16S Identity %: 76.06019151846786
Amount76.06019151846786
Unit1
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
POCPu: 5.100379815518177
Amount5.100379815518177
Unit1
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
G+C Difference (%): 13.509999999999998
Amount13.509999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix thermoacetophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
16S Identity %: 76.00545330606681
Amount76.00545330606681
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
POCPu: 6.577851790174854
Amount6.577851790174854
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
G+C Difference (%): 0.3299999999999983
Amount0.3299999999999983
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina siciliae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
16S Identity %: 75.93984962406014
Amount75.93984962406014
Unit1
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
POCPu: 4.482071713147411
Amount4.482071713147411
Unit1
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
G+C Difference (%): 10.280000000000001
Amount10.280000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcus vannielii / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcus vannielii / qualifier
 
16S Identity %: 75.9069130732375
Amount75.9069130732375
Unit1
Property / Comparison to close relatives: Methanococcus vannielii / qualifier
 
POCPu: 5.368748233964396
Amount5.368748233964396
Unit1
Property / Comparison to close relatives: Methanococcus vannielii / qualifier
 
G+C Difference (%): 21.89
Amount21.89
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocaldococcus jannaschii / rank
 
Normal rank
Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier
 
16S Identity %: 75.86912065439672
Amount75.86912065439672
Unit1
Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier
 
POCPu: 5.5858310626703
Amount5.5858310626703
Unit1
Property / Comparison to close relatives: Methanocaldococcus jannaschii / qualifier
 
G+C Difference (%): 21.93
Amount21.93
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosphaerula palustris / rank
 
Normal rank
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
16S Identity %: 75.80534612748457
Amount75.80534612748457
Unit1
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
POCPu: 5.42432195975503
Amount5.42432195975503
Unit1
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
G+C Difference (%): 2.1300000000000026
Amount2.1300000000000026
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcus aeolicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcus aeolicus / qualifier
 
16S Identity %: 75.80314422419686
Amount75.80314422419686
Unit1
Property / Comparison to close relatives: Methanococcus aeolicus / qualifier
 
POCPu: 5.123568414707655
Amount5.123568414707655
Unit1
Property / Comparison to close relatives: Methanococcus aeolicus / qualifier
 
G+C Difference (%): 23.18
Amount23.18
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus vulcani / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
16S Identity %: 75.3889674681754
Amount75.3889674681754
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
POCPu: 5.9868421052631575
Amount5.9868421052631575
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
G+C Difference (%): 13.019999999999996
Amount13.019999999999996
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH28 / rank
 
Normal rank
Property / CAZyme: GH28 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH19 / rank
 
Normal rank
Property / CAZyme: GH19 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT7 / rank
 
Normal rank
Property / CAZyme: GT7 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT13 / rank
 
Normal rank
Property / CAZyme: GT13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE4 / rank
 
Normal rank
Property / CAZyme: CE4 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 8
Amount8
Unit1
Property / CAZyme
 
Property / CAZyme: CBM48 / rank
 
Normal rank
Property / CAZyme: CBM48 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM13 / rank
 
Normal rank
Property / CAZyme: CBM13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM5 / rank
 
Normal rank
Property / CAZyme: CBM5 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Proline biosynthesis, glutamate => proline / rank
 
Normal rank
Property / Pathway: Proline biosynthesis, glutamate => proline / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: C10-C20 isoprenoid biosynthesis, bacteria / rank
 
Normal rank
Property / Pathway: C10-C20 isoprenoid biosynthesis, bacteria / qualifier
 
Property / Pathway
 
Property / Pathway: C10-C20 isoprenoid biosynthesis, archaea / rank
 
Normal rank
Property / Pathway: C10-C20 isoprenoid biosynthesis, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine salvage pathway, HMP/HET => TMP / rank
 
Normal rank
Property / Pathway: Thiamine salvage pathway, HMP/HET => TMP / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / rank
 
Normal rank
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / rank
 
Normal rank
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / qualifier
 
Property / Pathway
 
Property / Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea / rank
 
Normal rank
Property / Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Tryptophan biosynthesis, chorismate => tryptophan / rank
 
Normal rank
Property / Pathway: Tryptophan biosynthesis, chorismate => tryptophan / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Methionine degradation I / rank
 
Normal rank
Property / Pathway: Methionine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine degradation I / rank
 
Normal rank
Property / Pathway: Cysteine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Methanol conversion / rank
 
Normal rank
Property / Pathway: Methanol conversion / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 9
Amount9
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0.22
Amount0.22
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.9
Amount0.9
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 1.8
Amount1.8
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.1
Amount0.1
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.1
Amount0.1
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 22.2
Amount22.2
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.35
Amount0.35
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 1.3
Amount1.3
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.14
Amount0.14
Unit1
Property / MAGs
 
Property / MAGs: GCA_017468935.1_ASM1746893v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_017468935.1_ASM1746893v1_genomic.fna / qualifier
 

Latest revision as of 21:17, 17 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_017468935.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      92.19858156028369
      43.6862058909303
      2.3700000000000045
      0 references
      87.14185883997206
      20.045558086560362
      7.259999999999998
      0 references
      78.75912408759123
      4.915422885572139
      3.210000000000001
      0 references
      78.59577368779823
      3.9168665067945643
      15.920000000000002
      0 references
      78.5568413886998
      4.430195278344506
      13.299999999999997
      0 references
      78.54223433242507
      4.192685102586976
      7.229999999999997
      0 references
      0 references
      78.13351498637601
      4.29121041728322
      17.240000000000002
      0 references
      77.9269202087994
      3.8568257491675917
      19.240000000000002
      0 references
      77.70961145194273
      5.648820326678766
      0 references
      77.62619372442019
      5.682839173405211
      9.159999999999997
      0 references
      0 references
      77.45231607629428
      6.255813953488372
      0 references
      77.3972602739726
      5.809031044214487
      10.719999999999999
      0 references
      77.37730061349694
      6.252894858730894
      0 references
      77.31607629427792
      5.8766859344894025
      0 references
      77.23802914642609
      5.643340857787811
      11.350000000000001
      0 references
      77.23214285714286
      5.575326215895611
      2.280000000000001
      0 references
      77.04359673024524
      6.113342257920571
      12.280000000000001
      0 references
      77.02984038861902
      4.196576477084483
      16.729999999999997
      0 references
      77.02219040801718
      5.747126436781609
      0 references
      77.00976709241172
      6.993828974434322
      1.3500000000000014
      0 references
      77.00220426157237
      6.082375478927203
      11.530000000000001
      0 references
      0 references
      76.83923705722071
      5.914826498422713
      10.600000000000001
      0 references
      76.81584739545121
      6.175298804780876
      10.699999999999996
      0 references
      76.80164722031572
      5.623064093400048
      16.799999999999997
      0 references
      76.775956284153
      5.7535422928295405
      0 references
      76.7394270122783
      4.854368932038835
      2.229999999999997
      0 references
      76.73611111111111
      5.899548232792984
      18.879999999999995
      0 references
      76.72826830937713
      6.108065779169929
      0 references
      76.67121418826738
      5.621181262729124
      1.3800000000000026
      0 references
      0 references
      0 references
      76.57103825136612
      5.292076344707923
      23.939999999999998
      0 references
      76.5034965034965
      4.4564291796764115
      1.6099999999999994
      0 references
      76.417704011065
      6.27625401531999
      6.100000000000001
      0 references
      76.41172265904217
      5.659190945294487
      0 references
      76.39484978540773
      5.677227301722305
      10.649999999999999
      0 references
      0 references
      76.16120218579235
      5.915267785771383
      0 references
      76.0914760914761
      5.577412635963897
      1.2899999999999991
      0 references
      76.06019151846786
      5.100379815518177
      13.509999999999998
      0 references
      76.00545330606681
      6.577851790174854
      0.3299999999999983
      0 references
      75.93984962406014
      4.482071713147411
      10.280000000000001
      0 references
      75.9069130732375
      5.368748233964396
      0 references
      75.86912065439672
      5.5858310626703
      0 references
      75.80534612748457
      5.42432195975503
      2.1300000000000026
      0 references
      75.80314422419686
      5.123568414707655
      0 references
      75.3889674681754
      5.9868421052631575
      13.019999999999996
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references