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GCF_000012545.1 (Q138969): Difference between revisions

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Created a new Item
 
Added qualifier: Ecosystem (P27): Human (Q43674)
 
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Property / Protologue of the species
 
no current description - please contribute here
Property / Protologue of the species: no current description - please contribute here / rank
 
Normal rank
Property / Instance of
 
Property / Instance of: Genome Assembly Accession / rank
 
Normal rank
Property / GTDB
 
Property / GTDB: Archaea / rank
 
Normal rank
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / GTDB: Archaea / qualifier
 
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosphaera stadtmanae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier
 
16S Identity %: 100
Amount100
Unit1
Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier
 
POCPu: 99.93556701030928
Amount99.93556701030928
Unit1
Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier
 
ANI %: 100
Amount100
Unit1
Property / Comparison to close relatives: Methanosphaera stadtmanae / qualifier
 
G+C Difference (%): 0
Amount0
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosphaera cuniculi / rank
 
Normal rank
Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier
 
16S Identity %: 95.86720867208672
Amount95.86720867208672
Unit1
Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier
 
POCPu: 68.56869620656678
Amount68.56869620656678
Unit1
Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier
 
ANI %: 79.1823
Amount79.1823
Unit1
Property / Comparison to close relatives: Methanosphaera cuniculi / qualifier
 
G+C Difference (%): 0.4499999999999993
Amount0.4499999999999993
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium paludis / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium paludis / qualifier
 
16S Identity %: 91.0386965376782
Amount91.0386965376782
Unit1
Property / Comparison to close relatives: Methanobacterium paludis / qualifier
 
POCPu: 34.97376967274544
Amount34.97376967274544
Unit1
Property / Comparison to close relatives: Methanobacterium paludis / qualifier
 
G+C Difference (%): 8.099999999999998
Amount8.099999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium bryantii / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium bryantii / qualifier
 
16S Identity %: 91.03174603174602
Amount91.03174603174602
Unit1
Property / Comparison to close relatives: Methanobacterium bryantii / qualifier
 
POCPu: 30.17241379310345
Amount30.17241379310345
Unit1
Property / Comparison to close relatives: Methanobacterium bryantii / qualifier
 
G+C Difference (%): 5.559999999999999
Amount5.559999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium aggregans / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium aggregans / qualifier
 
16S Identity %: 90.79885877318117
Amount90.79885877318117
Unit1
Property / Comparison to close relatives: Methanobacterium aggregans / qualifier
 
POCPu: 35.85005279831046
Amount35.85005279831046
Unit1
Property / Comparison to close relatives: Methanobacterium aggregans / qualifier
 
G+C Difference (%): 10.510000000000002
Amount10.510000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter olleyae / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier
 
16S Identity %: 90.64976228209191
Amount90.64976228209191
Unit1
Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier
 
POCPu: 35.7869539198085
Amount35.7869539198085
Unit1
Property / Comparison to close relatives: Methanobrevibacter olleyae / qualifier
 
G+C Difference (%): 0.8299999999999983
Amount0.8299999999999983
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium veterum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium veterum / qualifier
 
16S Identity %: 90.625
Amount90.625
Unit1
Property / Comparison to close relatives: Methanobacterium veterum / qualifier
 
POCPu: 30.36009933774834
Amount30.36009933774834
Unit1
Property / Comparison to close relatives: Methanobacterium veterum / qualifier
 
G+C Difference (%): 5.540000000000003
Amount5.540000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / qualifier
 
16S Identity %: 90.61976549413735
Amount90.61976549413735
Unit1
Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / qualifier
 
POCPu: 34.402803990293876
Amount34.402803990293876
Unit1
Property / Comparison to close relatives: Methanobacterium alkalithermotolerans / qualifier
 
G+C Difference (%): 8.720000000000002
Amount8.720000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium subterraneum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier
 
16S Identity %: 90.57262569832403
Amount90.57262569832403
Unit1
Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier
 
POCPu: 32.4812030075188
Amount32.4812030075188
Unit1
Property / Comparison to close relatives: Methanobacterium subterraneum / qualifier
 
G+C Difference (%): 11.77
Amount11.77
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter acididurans / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter acididurans / qualifier
 
16S Identity %: 90.49740163325909
Amount90.49740163325909
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium formicicum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium formicicum / qualifier
 
16S Identity %: 90.45884923525126
Amount90.45884923525126
Unit1
Property / Comparison to close relatives: Methanobacterium formicicum / qualifier
 
POCPu: 33.64675984752223
Amount33.64675984752223
Unit1
Property / Comparison to close relatives: Methanobacterium formicicum / qualifier
 
G+C Difference (%): 13.739999999999998
Amount13.739999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium congolense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium congolense / qualifier
 
16S Identity %: 90.4432132963989
Amount90.4432132963989
Unit1
Property / Comparison to close relatives: Methanobacterium congolense / qualifier
 
POCPu: 35.56581986143187
Amount35.56581986143187
Unit1
Property / Comparison to close relatives: Methanobacterium congolense / qualifier
 
G+C Difference (%): 10.860000000000003
Amount10.860000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter ruminantium / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier
 
16S Identity %: 90.31358885017423
Amount90.31358885017423
Unit1
Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier
 
POCPu: 32.178085843774994
Amount32.178085843774994
Unit1
Property / Comparison to close relatives: Methanobrevibacter ruminantium / qualifier
 
G+C Difference (%): 5.010000000000002
Amount5.010000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium petrolearium / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier
 
16S Identity %: 90.28077753779698
Amount90.28077753779698
Unit1
Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier
 
POCPu: 33.58094262295082
Amount33.58094262295082
Unit1
Property / Comparison to close relatives: Methanobacterium petrolearium / qualifier
 
G+C Difference (%): 10.140000000000004
Amount10.140000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium beijingense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium beijingense / qualifier
 
16S Identity %: 90.23354564755839
Amount90.23354564755839
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium oryzae / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium oryzae / qualifier
 
16S Identity %: 90.21512838306731
Amount90.21512838306731
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium movens / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium movens / qualifier
 
16S Identity %: 90.18789144050105
Amount90.18789144050105
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium arcticum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium arcticum / qualifier
 
16S Identity %: 90.0990099009901
Amount90.0990099009901
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium lacus / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium lacus / qualifier
 
16S Identity %: 90.09679821295606
Amount90.09679821295606
Unit1
Property / Comparison to close relatives: Methanobacterium lacus / qualifier
 
POCPu: 32.84241531664212
Amount32.84241531664212
Unit1
Property / Comparison to close relatives: Methanobacterium lacus / qualifier
 
G+C Difference (%): 8.2
Amount8.2
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter curvatus / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier
 
16S Identity %: 90
Amount90
Unit1
Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier
 
POCPu: 30.363223609534618
Amount30.363223609534618
Unit1
Property / Comparison to close relatives: Methanobrevibacter curvatus / qualifier
 
G+C Difference (%): 1.9100000000000001
Amount1.9100000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium flexile / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium flexile / qualifier
 
16S Identity %: 89.97912317327767
Amount89.97912317327767
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium alcaliphilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
16S Identity %: 89.93621545003543
Amount89.93621545003543
Unit1
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
POCPu: 34.50064850843061
Amount34.50064850843061
Unit1
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
G+C Difference (%): 5.77
Amount5.77
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter arboriphilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier
 
16S Identity %: 89.92862807295798
Amount89.92862807295798
Unit1
Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier
 
POCPu: 34.14285714285714
Amount34.14285714285714
Unit1
Property / Comparison to close relatives: Methanobrevibacter arboriphilus / qualifier
 
G+C Difference (%): 2.1899999999999977
Amount2.1899999999999977
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium ferruginis / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier
 
16S Identity %: 89.91477272727273
Amount89.91477272727273
Unit1
Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier
 
POCPu: 31.05063573499888
Amount31.05063573499888
Unit1
Property / Comparison to close relatives: Methanobacterium ferruginis / qualifier
 
G+C Difference (%): 9.760000000000002
Amount9.760000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium aarhusense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium aarhusense / qualifier
 
16S Identity %: 89.7897897897898
Amount89.7897897897898
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter filiformis / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier
 
16S Identity %: 89.69830757910228
Amount89.69830757910228
Unit1
Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier
 
POCPu: 31.60458452722063
Amount31.60458452722063
Unit1
Property / Comparison to close relatives: Methanobrevibacter filiformis / qualifier
 
G+C Difference (%): 0.6400000000000006
Amount0.6400000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium kanagiense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium kanagiense / qualifier
 
16S Identity %: 89.66461327857633
Amount89.66461327857633
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter boviskoreani / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter boviskoreani / qualifier
 
16S Identity %: 89.61447678992918
Amount89.61447678992918
Unit1
Property / Comparison to close relatives: Methanobrevibacter boviskoreani / qualifier
 
POCPu: 38.09668592277288
Amount38.09668592277288
Unit1
Property / Comparison to close relatives: Methanobrevibacter boviskoreani / qualifier
 
G+C Difference (%): 1.3500000000000014
Amount1.3500000000000014
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium palustre / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium palustre / qualifier
 
16S Identity %: 89.47368421052632
Amount89.47368421052632
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter wolinii / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter wolinii / qualifier
 
16S Identity %: 89.41954445260838
Amount89.41954445260838
Unit1
Property / Comparison to close relatives: Methanobrevibacter wolinii / qualifier
 
POCPu: 39.11701142327879
Amount39.11701142327879
Unit1
Property / Comparison to close relatives: Methanobrevibacter wolinii / qualifier
 
G+C Difference (%): 3.4599999999999973
Amount3.4599999999999973
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
16S Identity %: 89.27359131025119
Amount89.27359131025119
Unit1
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
POCPu: 33.8098016336056
Amount33.8098016336056
Unit1
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
G+C Difference (%): 21.91
Amount21.91
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter smithii / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier
 
16S Identity %: 89.2663043478261
Amount89.2663043478261
Unit1
Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier
 
POCPu: 37.244897959183675
Amount37.244897959183675
Unit1
Property / Comparison to close relatives: Methanobrevibacter smithii / qualifier
 
G+C Difference (%): 3.400000000000002
Amount3.400000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter cuticularis / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter cuticularis / qualifier
 
16S Identity %: 89.2530487804878
Amount89.2530487804878
Unit1
Property / Comparison to close relatives: Methanobrevibacter cuticularis / qualifier
 
POCPu: 31.517832457837986
Amount31.517832457837986
Unit1
Property / Comparison to close relatives: Methanobrevibacter cuticularis / qualifier
 
G+C Difference (%): 0.8399999999999999
Amount0.8399999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium ivanovii / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium ivanovii / qualifier
 
16S Identity %: 89.25035360678925
Amount89.25035360678925
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium movilense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium movilense / qualifier
 
16S Identity %: 89.23533778767631
Amount89.23533778767631
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter thermophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter thermophilus / qualifier
 
16S Identity %: 89.06030855539971
Amount89.06030855539971
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter millerae / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter millerae / qualifier
 
16S Identity %: 89.04761904761904
Amount89.04761904761904
Unit1
Property / Comparison to close relatives: Methanobrevibacter millerae / qualifier
 
POCPu: 31.62458556490691
Amount31.62458556490691
Unit1
Property / Comparison to close relatives: Methanobrevibacter millerae / qualifier
 
G+C Difference (%): 8.790000000000003
Amount8.790000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter marburgensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier
 
16S Identity %: 88.93414799728446
Amount88.93414799728446
Unit1
Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier
 
POCPu: 34.45454545454545
Amount34.45454545454545
Unit1
Property / Comparison to close relatives: Methanothermobacter marburgensis / qualifier
 
G+C Difference (%): 21.01
Amount21.01
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium spitsbergense / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium spitsbergense / qualifier
 
16S Identity %: 88.92589508742714
Amount88.92589508742714
Unit1
Property / Comparison to close relatives: Methanobacterium spitsbergense / qualifier
 
POCPu: 31.40342751273738
Amount31.40342751273738
Unit1
Property / Comparison to close relatives: Methanobacterium spitsbergense / qualifier
 
G+C Difference (%): 4.890000000000004
Amount4.890000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter thermoflexus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter thermoflexus / qualifier
 
16S Identity %: 88.88888888888889
Amount88.88888888888889
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter woesei / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier
 
16S Identity %: 88.82220555138784
Amount88.82220555138784
Unit1
Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier
 
POCPu: 39.08742820676452
Amount39.08742820676452
Unit1
Property / Comparison to close relatives: Methanobrevibacter woesei / qualifier
 
G+C Difference (%): 2.2699999999999996
Amount2.2699999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter wolfei / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter wolfei / qualifier
 
16S Identity %: 88.44815588030619
Amount88.44815588030619
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter gottschalkii / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter gottschalkii / qualifier
 
16S Identity %: 88.42662632375189
Amount88.42662632375189
Unit1
Property / Comparison to close relatives: Methanobrevibacter gottschalkii / qualifier
 
POCPu: 35.630153121319196
Amount35.630153121319196
Unit1
Property / Comparison to close relatives: Methanobrevibacter gottschalkii / qualifier
 
G+C Difference (%): 2.3900000000000006
Amount2.3900000000000006
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter defluvii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter defluvii / qualifier
 
16S Identity %: 88.29268292682927
Amount88.29268292682927
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobrevibacter thaueri / rank
 
Normal rank
Property / Comparison to close relatives: Methanobrevibacter thaueri / qualifier
 
16S Identity %: 87.98418972332016
Amount87.98418972332016
Unit1
Property / Comparison to close relatives: Methanobrevibacter thaueri / qualifier
 
POCPu: 33.396533044420366
Amount33.396533044420366
Unit1
Property / Comparison to close relatives: Methanobrevibacter thaueri / qualifier
 
G+C Difference (%): 9.239999999999998
Amount9.239999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter tenebrarum / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier
 
16S Identity %: 87.62446657183499
Amount87.62446657183499
Unit1
Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier
 
POCPu: 36.60995589161941
Amount36.60995589161941
Unit1
Property / Comparison to close relatives: Methanothermobacter tenebrarum / qualifier
 
G+C Difference (%): 14.419999999999998
Amount14.419999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter crinale / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter crinale / qualifier
 
16S Identity %: 87.38738738738738
Amount87.38738738738738
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium thermaggregans / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium thermaggregans / qualifier
 
16S Identity %: 86.35724331926863
Amount86.35724331926863
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermus fervidus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermus fervidus / qualifier
 
16S Identity %: 83.35597826086956
Amount83.35597826086956
Unit1
Property / Comparison to close relatives: Methanothermus fervidus / qualifier
 
POCPu: 35.36585365853659
Amount35.36585365853659
Unit1
Property / Comparison to close relatives: Methanothermus fervidus / qualifier
 
G+C Difference (%): 4.010000000000002
Amount4.010000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermus sociabilis / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermus sociabilis / qualifier
 
16S Identity %: 82.93515358361775
Amount82.93515358361775
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter wolfeii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter wolfeii / qualifier
 
POCPu: 34.16715715126545
Amount34.16715715126545
Unit1
Property / Comparison to close relatives: Methanothermobacter wolfeii / qualifier
 
G+C Difference (%): 21.040000000000003
Amount21.040000000000003
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: GH19 / rank
 
Normal rank
Property / CAZyme: GH19 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 31
Amount31
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 18
Amount18
Unit1
Property / CAZyme
 
Property / CAZyme: GT13 / rank
 
Normal rank
Property / CAZyme: GT13 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT0 / rank
 
Normal rank
Property / CAZyme: GT0 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT81 / rank
 
Normal rank
Property / CAZyme: GT81 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT22 / rank
 
Normal rank
Property / CAZyme: GT22 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT28 / rank
 
Normal rank
Property / CAZyme: GT28 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: CE9 / rank
 
Normal rank
Property / CAZyme: CE9 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 6
Amount6
Unit1
Property / CAZyme
 
Property / CAZyme: CBM5 / rank
 
Normal rank
Property / CAZyme: CBM5 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM48 / rank
 
Normal rank
Property / CAZyme: CBM48 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Glutathione biosynthesis, glutamate => glutathione / rank
 
Normal rank
Property / Pathway: Glutathione biosynthesis, glutamate => glutathione / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme M biosynthesis / rank
 
Normal rank
Property / Pathway: Coenzyme M biosynthesis / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank
 
Normal rank
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / rank
 
Normal rank
Property / Pathway: UDP-Galf biosynthesis, UDP-Glc => UDP-Galf / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA / rank
 
Normal rank
Property / Pathway: UDP-ManNAcA biosynthesis, UDP-GlcNAc => UDP-ManNAcA / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, methanol => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, methanol => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Methanol conversion / rank
 
Normal rank
Property / Pathway: Methanol conversion / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0.68
Amount0.68
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 1.2
Amount1.2
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.07
Amount0.07
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 6.3
Amount6.3
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0.38
Amount0.38
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 1
Amount1
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.11
Amount0.11
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 10.1
Amount10.1
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 12
Amount12
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.64
Amount0.64
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 2
Amount2
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.08
Amount0.08
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.07
Amount0.07
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 33.9
Amount33.9
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.39
Amount0.39
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0.46
Amount0.46
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 3.8
Amount3.8
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.6
Amount0.6
Unit1
Property / MAGs
 
Property / MAGs: ZeeviD_2015__PNP_Main_127_megahit__bin_83.fa / rank
 
Normal rank
Property / MAGs: ZeeviD_2015__PNP_Main_127_megahit__bin_83.fa / qualifier
 

Latest revision as of 15:34, 15 August 2026

genome assembly
Language Label Description Also known as
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    English
    GCF_000012545.1
    genome assembly

      Statements

      no current description - please contribute here
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