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‎Added qualifier: Prevalence (%) (P18): 0.2
‎Added qualifier: Ecosystem (P27): Generic (Q43559)
 
(44 intermediate revisions by the same user not shown)
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0.25
Amount0.25
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 11.6
Amount11.6
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 8.4
Amount8.4
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.09
Amount0.09
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.12
Amount0.12
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.08
Amount0.08
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: GCA_002425925.1_ASM242592v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_002425925.1_ASM242592v1_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: GCA_012729065.1_ASM1272906v1_genomic.fna / rank
 
Normal rank
Property / MAGs: GCA_012729065.1_ASM1272906v1_genomic.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300006517_6.fna / rank
 
Normal rank
Property / MAGs: 3300006517_6.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300009566_18.fna / rank
 
Normal rank
Property / MAGs: 3300009566_18.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300021561_43.fna / rank
 
Normal rank
Property / MAGs: 3300021561_43.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300021603_33.fna / rank
 
Normal rank
Property / MAGs: 3300021603_33.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300022177_35.fna / rank
 
Normal rank
Property / MAGs: 3300022177_35.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300022181_38.fna / rank
 
Normal rank
Property / MAGs: 3300022181_38.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300028622_12.fna / rank
 
Normal rank
Property / MAGs: 3300028622_12.fna / qualifier
 
Property / MAGs
 
Property / MAGs: 3300028625_17.fna / rank
 
Normal rank
Property / MAGs: 3300028625_17.fna / qualifier
 

Latest revision as of 22:33, 22 July 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_001603165.1
    genome assembly

      Statements

      Protologue of the species
      no current description - please contribute here
      0 references
      Comparison to close relatives
      Spirochaeta lutea
      16S Identity %
      26.82926829268293
      POCPu
      12.847708625175105
      G+C Difference (%)
      3.4099999999999966
      0 references
      Marispirochaeta aestuarii
      16S Identity %
      26.452494873547504
      POCPu
      14.473012089221863
      G+C Difference (%)
      4.119999999999997
      0 references
      Sediminispirochaeta smaragdinae
      16S Identity %
      26.2434554973822
      POCPu
      13.149606299212598
      G+C Difference (%)
      8.18
      0 references
      Sphaerochaeta coccoides
      16S Identity %
      25.853018372703414
      0 references
      Treponema socranskii subsp. socranskii
      16S Identity %
      25.510876730388926
      0 references
      Spirochaeta halophila
      16S Identity %
      25.47231270358306
      0 references
      Treponema socranskii subsp. paredis
      16S Identity %
      25.45931758530184
      0 references
      Spirochaeta dissipatitropha
      16S Identity %
      25.4272043745728
      0 references
      Sphaerochaeta associata
      16S Identity %
      25.298804780876495
      POCPu
      13.30188679245283
      G+C Difference (%)
      6.369999999999997
      0 references
      Alkalispirochaeta sphaeroplastigenens
      16S Identity %
      25.255275697753575
      0 references
      Rectinema subterraneum
      16S Identity %
      25.085675119945165
      POCPu
      42.2376409366869
      G+C Difference (%)
      5.009999999999998
      0 references
      Alkalispirochaeta americana
      16S Identity %
      24.965986394557824
      POCPu
      12.555780933062879
      G+C Difference (%)
      0.39000000000000057
      0 references
      Sphaerochaeta globosa
      16S Identity %
      24.934725848563968
      POCPu
      13.13328137178488
      G+C Difference (%)
      8.280000000000001
      0 references
      Teretinema zuelzerae
      16S Identity %
      24.8862897985705
      POCPu
      15.415939499709133
      G+C Difference (%)
      4.420000000000002
      0 references
      Treponema phagedenis
      16S Identity %
      24.87012987012987
      POCPu
      12.623512805001008
      G+C Difference (%)
      17.240000000000002
      0 references
      Alkalispirochaeta alkalica
      16S Identity %
      24.83085250338295
      POCPu
      12.691287492348499
      G+C Difference (%)
      3.0799999999999983
      0 references
      Treponema porcinum
      16S Identity %
      24.719887955182074
      POCPu
      12.441093308199811
      G+C Difference (%)
      14.699999999999996
      0 references
      Sphaerochaeta pleomorpha
      16S Identity %
      24.688932547478718
      POCPu
      13.334597875569044
      G+C Difference (%)
      10.949999999999996
      0 references
      Rectinema cohabitans
      16S Identity %
      24.601063829787233
      0 references
      Treponema peruense
      16S Identity %
      24.559111691704768
      POCPu
      12.096235241701939
      G+C Difference (%)
      15.909999999999997
      0 references
      Alkalispirochaeta cellulosivorans
      16S Identity %
      24.445983379501385
      0 references
      Treponema medium
      16S Identity %
      24.363161332462443
      POCPu
      13.02568765628552
      G+C Difference (%)
      12.89
      0 references
      Treponema saccharophilum
      16S Identity %
      24.313725490196077
      POCPu
      10.565110565110565
      G+C Difference (%)
      3.969999999999999
      0 references
      Salinispira pacifica
      16S Identity %
      24.306025727826675
      POCPu
      11.877107530910454
      G+C Difference (%)
      5.289999999999999
      0 references
      Treponema putidum
      16S Identity %
      24.27459306440198
      POCPu
      12.243113248797552
      G+C Difference (%)
      19.869999999999997
      0 references
      Treponema berlinense
      16S Identity %
      24.271844660194176
      POCPu
      12.37846810528812
      G+C Difference (%)
      17.740000000000002
      0 references
      Bullifex porci
      16S Identity %
      24.101198402130493
      POCPu
      11.136944896535688
      G+C Difference (%)
      21.35
      0 references
      Treponema pedis
      16S Identity %
      24.064925899788285
      POCPu
      11.66423661737138
      G+C Difference (%)
      20.28
      0 references
      Treponema maltophilum
      16S Identity %
      24.03405370006549
      POCPu
      14.213431462741491
      G+C Difference (%)
      9.329999999999998
      0 references
      Treponema brennaborense
      16S Identity %
      24.02088772845953
      POCPu
      15.143041514304151
      G+C Difference (%)
      5.68
      0 references
      Treponema stenostreptum
      16S Identity %
      24.018324607329845
      0 references
      Treponema primitia
      16S Identity %
      23.94468704512373
      POCPu
      15.677813736066163
      G+C Difference (%)
      6.309999999999995
      0 references
      Sphaerochaeta halotolerans
      16S Identity %
      23.828125
      POCPu
      13.671792711186011
      G+C Difference (%)
      10.399999999999999
      0 references
      Spirochaeta africana
      16S Identity %
      23.7449118046133
      POCPu
      12.079573420836752
      G+C Difference (%)
      0.6200000000000045
      0 references
      Treponema isoptericolens
      16S Identity %
      23.669849931787176
      0 references
      Breznakiella homolactica
      16S Identity %
      23.550465282748746
      POCPu
      16.94997571636717
      G+C Difference (%)
      4.229999999999997
      0 references
      Gracilinema caldarium
      16S Identity %
      23.452768729641694
      POCPu
      22.72635203564918
      G+C Difference (%)
      11.57
      0 references
      Spirochaeta thermophila
      16S Identity %
      23.418134377038484
      POCPu
      15.664303681683055
      G+C Difference (%)
      3.770000000000003
      0 references
      Brucepastera parasyntrophica
      16S Identity %
      23.364485981308412
      POCPu
      14.375836360160582
      G+C Difference (%)
      11.18
      0 references
      Treponema denticola
      16S Identity %
      23.076923076923077
      POCPu
      11.79387667097887
      G+C Difference (%)
      19.28
      0 references
      Spirochaeta aurantia subsp. aurantia
      16S Identity %
      22.971204188481675
      0 references
      Spirochaeta isovalerica
      16S Identity %
      22.911227154046998
      POCPu
      11.507191994996873
      G+C Difference (%)
      10.949999999999996
      0 references
      Treponema lecithinolyticum
      16S Identity %
      22.71186440677966
      POCPu
      14.5224171539961
      G+C Difference (%)
      13.409999999999997
      0 references
      Treponema pectinovorum
      16S Identity %
      22.623178348369187
      POCPu
      12.836123795027904
      G+C Difference (%)
      20.019999999999996
      0 references
      Treponema azotonutricium
      16S Identity %
      22.525597269624573
      0 references
      Treponema parvum
      16S Identity %
      22.424242424242426
      POCPu
      13.507925568573398
      G+C Difference (%)
      13.170000000000002
      0 references
      Spirochaeta asiatica
      16S Identity %
      22.403258655804482
      0 references
      Treponema bryantii
      16S Identity %
      22.35294117647059
      POCPu
      11.855535200209369
      G+C Difference (%)
      25.009999999999998
      0 references
      Treponema socranskii
      POCPu
      12.869336835193696
      G+C Difference (%)
      7.990000000000002
      0 references
      Parasphaerochaeta coccoides
      POCPu
      13.423331635252165
      G+C Difference (%)
      6.589999999999996
      0 references
      Leadbettera azotonutricia
      POCPu
      15.715331137943652
      G+C Difference (%)
      7.350000000000001
      0 references
      CAZyme
      GH13
      Occurance
      8
      0 references
      GH35
      Occurance
      1
      0 references
      GH23
      Occurance
      4
      0 references
      GH6
      Occurance
      2
      0 references
      GH77
      Occurance
      1
      0 references
      GH154
      Occurance
      1
      0 references
      GH5
      Occurance
      1
      0 references
      GH57
      Occurance
      2
      0 references
      GH2
      Occurance
      2
      0 references
      GH28
      Occurance
      2
      0 references
      GH3
      Occurance
      1
      0 references
      GH101
      Occurance
      1
      0 references
      GH1
      Occurance
      4
      0 references
      GH63
      Occurance
      1
      0 references
      GH88
      Occurance
      1
      0 references
      GH43
      Occurance
      4
      0 references
      GH105
      Occurance
      4
      0 references
      GH38
      Occurance
      1
      0 references
      GH76
      Occurance
      1
      0 references
      GH19
      Occurance
      1
      0 references
      GT2
      Occurance
      12
      0 references
      GT13
      Occurance
      2
      0 references
      GT35
      Occurance
      1
      0 references
      GT51
      Occurance
      2
      0 references
      GT4
      Occurance
      11
      0 references
      GT22
      Occurance
      1
      0 references
      GT5
      Occurance
      1
      0 references
      GT30
      Occurance
      1
      0 references
      GT26
      Occurance
      1
      0 references
      GT32
      Occurance
      1
      0 references
      GT28
      Occurance
      2
      0 references
      GT0
      Occurance
      2
      0 references
      CE0
      Occurance
      1
      0 references
      CE9
      Occurance
      5
      0 references
      CE6
      Occurance
      1
      0 references
      CE11
      Occurance
      2
      0 references
      CE12
      Occurance
      2
      0 references
      CE4
      Occurance
      1
      0 references
      CBM48
      Occurance
      2
      0 references
      CBM50
      Occurance
      9
      0 references
      CBM13
      Occurance
      4
      0 references
      CBM57
      Occurance
      1
      0 references
      CBM51
      Occurance
      1
      0 references
      CBM5
      Occurance
      1
      0 references
      Ecosystem
       
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