GCA_021812025.1 (Q106914): Difference between revisions
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Created a new Item |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Protologue of the species | |||||||
no current description - please contribute here | |||||||
| Property / Protologue of the species: no current description - please contribute here / rank | |||||||
Normal rank | |||||||
| Property / Instance of | |||||||
| Property / Instance of: Genome Assembly Accession / rank | |||||||
Normal rank | |||||||
| Property / GTDB | |||||||
| Property / GTDB: Archaea / rank | |||||||
Normal rank | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermoplasma acidophilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier | |||||||
16S Identity %: 27.09190672153635
| |||||||
| Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier | |||||||
POCPu: 2.293577981651376
| |||||||
| Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier | |||||||
G+C Difference (%): 3.6599999999999966
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermoplasma volcanium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermoplasma volcanium / qualifier | |||||||
16S Identity %: 25.979381443298973
| |||||||
| Property / Comparison to close relatives: Thermoplasma volcanium / qualifier | |||||||
POCPu: 2.3131672597864767
| |||||||
| Property / Comparison to close relatives: Thermoplasma volcanium / qualifier | |||||||
G+C Difference (%): 9.729999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorussus vallis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorussus vallis / qualifier | |||||||
16S Identity %: 25.857338820301784
| |||||||
| Property / Comparison to close relatives: Halorussus vallis / qualifier | |||||||
POCPu: 0.3888987095633728
| |||||||
| Property / Comparison to close relatives: Halorussus vallis / qualifier | |||||||
G+C Difference (%): 16.520000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronosalvus rutilus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronosalvus rutilus / qualifier | |||||||
16S Identity %: 25.77107607950651
| |||||||
| Property / Comparison to close relatives: Natronosalvus rutilus / qualifier | |||||||
POCPu: 0.41279669762641896
| |||||||
| Property / Comparison to close relatives: Natronosalvus rutilus / qualifier | |||||||
G+C Difference (%): 13.310000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloplanus aerogenes / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloplanus aerogenes / qualifier | |||||||
16S Identity %: 25.70253598355038
| |||||||
| Property / Comparison to close relatives: Haloplanus aerogenes / qualifier | |||||||
POCPu: 0.5209566658773384
| |||||||
| Property / Comparison to close relatives: Haloplanus aerogenes / qualifier | |||||||
G+C Difference (%): 16.03000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halogranum salarium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halogranum salarium / qualifier | |||||||
16S Identity %: 25.64821303433777
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloplanus salinus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloplanus salinus / qualifier | |||||||
16S Identity %: 25.514403292181072
| |||||||
| Property / Comparison to close relatives: Haloplanus salinus / qualifier | |||||||
POCPu: 0.4019862851738
| |||||||
| Property / Comparison to close relatives: Haloplanus salinus / qualifier | |||||||
G+C Difference (%): 16.57
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis tationis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis tationis / qualifier | |||||||
16S Identity %: 25.355113636363637
| |||||||
| Property / Comparison to close relatives: Methanofollis tationis / qualifier | |||||||
POCPu: 1.128977078344167
| |||||||
| Property / Comparison to close relatives: Methanofollis tationis / qualifier | |||||||
G+C Difference (%): 11.490000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Microcaldus variisymbioticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Microcaldus variisymbioticus / qualifier | |||||||
16S Identity %: 25.223435948361473
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Nitrososphaera viennensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Nitrososphaera viennensis / qualifier | |||||||
16S Identity %: 25.137362637362635
| |||||||
| Property / Comparison to close relatives: Nitrososphaera viennensis / qualifier | |||||||
POCPu: 1.4068965517241379
| |||||||
| Property / Comparison to close relatives: Nitrososphaera viennensis / qualifier | |||||||
G+C Difference (%): 3.0700000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronosalvus amylolyticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronosalvus amylolyticus / qualifier | |||||||
16S Identity %: 24.93150684931507
| |||||||
| Property / Comparison to close relatives: Natronosalvus amylolyticus / qualifier | |||||||
POCPu: 0.41439476553980376
| |||||||
| Property / Comparison to close relatives: Natronosalvus amylolyticus / qualifier | |||||||
G+C Difference (%): 9.840000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Saccharolobus solfataricus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Saccharolobus solfataricus / qualifier | |||||||
16S Identity %: 24.897959183673468
| |||||||
| Property / Comparison to close relatives: Saccharolobus solfataricus / qualifier | |||||||
POCPu: 0.7117437722419928
| |||||||
| Property / Comparison to close relatives: Saccharolobus solfataricus / qualifier | |||||||
G+C Difference (%): 13.809999999999995
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Saccharolobus shibatae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Saccharolobus shibatae / qualifier | |||||||
16S Identity %: 24.897959183673468
| |||||||
| Property / Comparison to close relatives: Saccharolobus shibatae / qualifier | |||||||
POCPu: 0.8741721854304637
| |||||||
| Property / Comparison to close relatives: Saccharolobus shibatae / qualifier | |||||||
G+C Difference (%): 14.29
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronosalvus vescus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronosalvus vescus / qualifier | |||||||
16S Identity %: 24.863013698630137
| |||||||
| Property / Comparison to close relatives: Natronosalvus vescus / qualifier | |||||||
POCPu: 0.5164319248826291
| |||||||
| Property / Comparison to close relatives: Natronosalvus vescus / qualifier | |||||||
G+C Difference (%): 12.149999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloplanus natans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloplanus natans / qualifier | |||||||
16S Identity %: 24.7599451303155
| |||||||
| Property / Comparison to close relatives: Haloplanus natans / qualifier | |||||||
POCPu: 0.41566396849704657
| |||||||
| Property / Comparison to close relatives: Haloplanus natans / qualifier | |||||||
G+C Difference (%): 15.350000000000001
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis ethanolicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier | |||||||
16S Identity %: 24.60431654676259
| |||||||
| Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier | |||||||
POCPu: 0.8567931456548347
| |||||||
| Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier | |||||||
G+C Difference (%): 10.68
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis fontis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis fontis / qualifier | |||||||
16S Identity %: 24.532374100719426
| |||||||
| Property / Comparison to close relatives: Methanofollis fontis / qualifier | |||||||
POCPu: 1.1363636363636365
| |||||||
| Property / Comparison to close relatives: Methanofollis fontis / qualifier | |||||||
G+C Difference (%): 9.89
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Saliphagus infecundisoli / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier | |||||||
16S Identity %: 24.383561643835616
| |||||||
| Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier | |||||||
POCPu: 0.4436728395061728
| |||||||
| Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier | |||||||
G+C Difference (%): 14.550000000000004
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis liminatans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis liminatans / qualifier | |||||||
16S Identity %: 24.22360248447205
| |||||||
| Property / Comparison to close relatives: Methanofollis liminatans / qualifier | |||||||
POCPu: 1.0498687664041995
| |||||||
| Property / Comparison to close relatives: Methanofollis liminatans / qualifier | |||||||
G+C Difference (%): 11.310000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronobiforma cellulositropha / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier | |||||||
16S Identity %: 23.940677966101696
| |||||||
| Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier | |||||||
POCPu: 0.5244338498212158
| |||||||
| Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier | |||||||
G+C Difference (%): 15.899999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis aquaemaris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier | |||||||
16S Identity %: 23.73145979703357
| |||||||
| Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier | |||||||
POCPu: 1.1068943706514864
| |||||||
| Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier | |||||||
G+C Difference (%): 9.899999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halogranum amylolyticum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halogranum amylolyticum / qualifier | |||||||
16S Identity %: 23.593964334705074
| |||||||
| Property / Comparison to close relatives: Halogranum amylolyticum / qualifier | |||||||
POCPu: 0.37174721189591076
| |||||||
| Property / Comparison to close relatives: Halogranum amylolyticum / qualifier | |||||||
G+C Difference (%): 13.21
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halogranum rubrum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halogranum rubrum / qualifier | |||||||
16S Identity %: 23.50925291295408
| |||||||
| Property / Comparison to close relatives: Halogranum rubrum / qualifier | |||||||
POCPu: 0.4248744689069139
| |||||||
| Property / Comparison to close relatives: Halogranum rubrum / qualifier | |||||||
G+C Difference (%): 12.550000000000004
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH27 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH27 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 5
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 4
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT21 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT21 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 06:37, 13 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_021812025.1 |
genome assembly |
Statements
no current description - please contribute here
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