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GCA_021804105.1 (Q105427): Difference between revisions

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Added qualifier: POCPu (P4): 1.241782322863404
 
(134 intermediate revisions by the same user not shown)
Property / Comparison to close relatives: Thermofilum adornatum / qualifier
 
G+C Difference (%): 1.6300000000000026
Amount1.6300000000000026
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Natronobiforma cellulositropha / rank
 
Normal rank
Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier
 
16S Identity %: 24.91178546224418
Amount24.91178546224418
Unit1
Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier
 
POCPu: 0.40522287257991896
Amount0.40522287257991896
Unit1
Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier
 
G+C Difference (%): 17.409999999999997
Amount17.409999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Caldisphaera lagunensis / rank
 
Normal rank
Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier
 
16S Identity %: 24.87939352170917
Amount24.87939352170917
Unit1
Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier
 
POCPu: 1.5533165407220824
Amount1.5533165407220824
Unit1
Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier
 
G+C Difference (%): 18.11
Amount18.11
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
16S Identity %: 24.676209952283575
Amount24.676209952283575
Unit1
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
POCPu: 1.6831320892791803
Amount1.6831320892791803
Unit1
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
G+C Difference (%): 1.3999999999999986
Amount1.3999999999999986
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Halogranum rubrum / rank
 
Normal rank
Property / Comparison to close relatives: Halogranum rubrum / qualifier
 
16S Identity %: 24.57221081451061
Amount24.57221081451061
Unit1
Property / Comparison to close relatives: Halogranum rubrum / qualifier
 
POCPu: 0.423963133640553
Amount0.423963133640553
Unit1
Property / Comparison to close relatives: Halogranum rubrum / qualifier
 
G+C Difference (%): 14.060000000000002
Amount14.060000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Halogranum amylolyticum / rank
 
Normal rank
Property / Comparison to close relatives: Halogranum amylolyticum / qualifier
 
16S Identity %: 24.315068493150687
Amount24.315068493150687
Unit1
Property / Comparison to close relatives: Halogranum amylolyticum / qualifier
 
POCPu: 0.373073803730738
Amount0.373073803730738
Unit1
Property / Comparison to close relatives: Halogranum amylolyticum / qualifier
 
G+C Difference (%): 14.719999999999999
Amount14.719999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter thermophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter thermophilus / qualifier
 
16S Identity %: 24.31482782853127
Amount24.31482782853127
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Natronosalvus amylolyticus / rank
 
Normal rank
Property / Comparison to close relatives: Natronosalvus amylolyticus / qualifier
 
16S Identity %: 24.26520847573479
Amount24.26520847573479
Unit1
Property / Comparison to close relatives: Natronosalvus amylolyticus / qualifier
 
POCPu: 0.37251655629139074
Amount0.37251655629139074
Unit1
Property / Comparison to close relatives: Natronosalvus amylolyticus / qualifier
 
G+C Difference (%): 11.350000000000001
Amount11.350000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Natronosalvus vescus / rank
 
Normal rank
Property / Comparison to close relatives: Natronosalvus vescus / qualifier
 
16S Identity %: 24.196855775803144
Amount24.196855775803144
Unit1
Property / Comparison to close relatives: Natronosalvus vescus / qualifier
 
POCPu: 0.39937874417572666
Amount0.39937874417572666
Unit1
Property / Comparison to close relatives: Natronosalvus vescus / qualifier
 
G+C Difference (%): 13.659999999999997
Amount13.659999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Saliphagus infecundisoli / rank
 
Normal rank
Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier
 
16S Identity %: 24.06015037593985
Amount24.06015037593985
Unit1
Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier
 
POCPu: 0.33143067575032226
Amount0.33143067575032226
Unit1
Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier
 
G+C Difference (%): 16.060000000000002
Amount16.060000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Halogranum salarium / rank
 
Normal rank
Property / Comparison to close relatives: Halogranum salarium / qualifier
 
16S Identity %: 23.265592151366505
Amount23.265592151366505
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Microcaldus variisymbioticus / rank
 
Normal rank
Property / Comparison to close relatives: Microcaldus variisymbioticus / qualifier
 
16S Identity %: 22.51984126984127
Amount22.51984126984127
Unit1
Property / CAZyme
 
Property / CAZyme: GH65 / rank
 
Normal rank
Property / CAZyme: GH65 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH15 / rank
 
Normal rank
Property / CAZyme: GH15 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH76 / rank
 
Normal rank
Property / CAZyme: GH76 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH27 / rank
 
Normal rank
Property / CAZyme: GH27 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT20 / rank
 
Normal rank
Property / CAZyme: GT20 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT22 / rank
 
Normal rank
Property / CAZyme: GT22 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 10
Amount10
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 6
Amount6
Unit1
Property / CAZyme
 
Property / CAZyme: GT21 / rank
 
Normal rank
Property / CAZyme: GT21 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: CE14 / rank
 
Normal rank
Property / CAZyme: CE14 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM35 / rank
 
Normal rank
Property / CAZyme: CBM35 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank
 
Normal rank
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 04:09, 13 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_021804105.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      0 references
      26.47058823529412
      0.3731343283582089
      0 references
      0 references
      25.857338820301784
      0.37262872628726285
      0 references
      25.804243668720055
      0.3803131991051454
      17.540000000000006
      0 references
      25.684931506849317
      0.3351206434316354
      0 references
      25.598904859685145
      0.352843503528435
      0 references
      25.0679347826087
      1.241782322863404
      1.6300000000000026
      0 references
      24.91178546224418
      0.40522287257991896
      17.409999999999997
      0 references
      24.87939352170917
      1.5533165407220824
      0 references
      24.676209952283575
      1.6831320892791803
      1.3999999999999986
      0 references
      24.57221081451061
      0.423963133640553
      14.060000000000002
      0 references
      24.315068493150687
      0.373073803730738
      14.719999999999999
      0 references
      0 references
      24.26520847573479
      0.37251655629139074
      11.350000000000001
      0 references
      24.196855775803144
      0.39937874417572666
      13.659999999999997
      0 references
      24.06015037593985
      0.33143067575032226
      16.060000000000002
      0 references
      23.265592151366505
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
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