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GCA_021801785.1 (Q105108): Difference between revisions

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Added qualifier: POCPu (P4): 1.1987381703470033
 
(156 intermediate revisions by the same user not shown)
Property / Comparison to close relatives: Methanofollis liminatans / qualifier
 
G+C Difference (%): 14.740000000000002
Amount14.740000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Geothrix edaphica / rank
 
Normal rank
Property / Comparison to close relatives: Geothrix edaphica / qualifier
 
16S Identity %: 25.023786869647957
Amount25.023786869647957
Unit1
Property / Comparison to close relatives: Geothrix edaphica / qualifier
 
POCPu: 0.14029180695847362
Amount0.14029180695847362
Unit1
Property / Comparison to close relatives: Geothrix edaphica / qualifier
 
G+C Difference (%): 21.980000000000004
Amount21.980000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Desulfovibrio subterraneus / rank
 
Normal rank
Property / Comparison to close relatives: Desulfovibrio subterraneus / qualifier
 
16S Identity %: 24.928639391056137
Amount24.928639391056137
Unit1
Property / Comparison to close relatives: Desulfovibrio subterraneus / qualifier
 
POCPu: 0.09220839096357768
Amount0.09220839096357768
Unit1
Property / Comparison to close relatives: Desulfovibrio subterraneus / qualifier
 
G+C Difference (%): 10.439999999999998
Amount10.439999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Desulfovibrio psychrotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Desulfovibrio psychrotolerans / qualifier
 
16S Identity %: 24.928639391056137
Amount24.928639391056137
Unit1
Property / Comparison to close relatives: Desulfovibrio psychrotolerans / qualifier
 
POCPu: 0.09945300845350571
Amount0.09945300845350571
Unit1
Property / Comparison to close relatives: Desulfovibrio psychrotolerans / qualifier
 
G+C Difference (%): 13.060000000000002
Amount13.060000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Luteitalea pratensis / rank
 
Normal rank
Property / Comparison to close relatives: Luteitalea pratensis / qualifier
 
16S Identity %: 24.928639391056137
Amount24.928639391056137
Unit1
Property / Comparison to close relatives: Luteitalea pratensis / qualifier
 
POCPu: 0.11425307055127107
Amount0.11425307055127107
Unit1
Property / Comparison to close relatives: Luteitalea pratensis / qualifier
 
G+C Difference (%): 21
Amount21
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanospirillum psychrodurum / rank
 
Normal rank
Property / Comparison to close relatives: Methanospirillum psychrodurum / qualifier
 
16S Identity %: 24.761904761904763
Amount24.761904761904763
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofollis tationis / rank
 
Normal rank
Property / Comparison to close relatives: Methanofollis tationis / qualifier
 
16S Identity %: 24.738344433872502
Amount24.738344433872502
Unit1
Property / Comparison to close relatives: Methanofollis tationis / qualifier
 
POCPu: 1.2479474548440066
Amount1.2479474548440066
Unit1
Property / Comparison to close relatives: Methanofollis tationis / qualifier
 
G+C Difference (%): 14.920000000000002
Amount14.920000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofollis ethanolicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier
 
16S Identity %: 24.45290199809705
Amount24.45290199809705
Unit1
Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier
 
POCPu: 1.238938053097345
Amount1.238938053097345
Unit1
Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier
 
G+C Difference (%): 14.11
Amount14.11
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofervidicoccus abyssi / rank
 
Normal rank
Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier
 
16S Identity %: 24.357754519505235
Amount24.357754519505235
Unit1
Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier
 
POCPu: 2.212166918049271
Amount2.212166918049271
Unit1
Property / Comparison to close relatives: Methanofervidicoccus abyssi / qualifier
 
G+C Difference (%): 10.969999999999999
Amount10.969999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofollis aquaemaris / rank
 
Normal rank
Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier
 
16S Identity %: 24.285714285714285
Amount24.285714285714285
Unit1
Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier
 
POCPu: 1.1266747868453104
Amount1.1266747868453104
Unit1
Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier
 
G+C Difference (%): 13.329999999999998
Amount13.329999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanospirillum lacunae / rank
 
Normal rank
Property / Comparison to close relatives: Methanospirillum lacunae / qualifier
 
16S Identity %: 24
Amount24
Unit1
Property / Comparison to close relatives: Methanospirillum lacunae / qualifier
 
POCPu: 0.772573635924674
Amount0.772573635924674
Unit1
Property / Comparison to close relatives: Methanospirillum lacunae / qualifier
 
G+C Difference (%): 3.0899999999999963
Amount3.0899999999999963
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Geothrix limicola / rank
 
Normal rank
Property / Comparison to close relatives: Geothrix limicola / qualifier
 
16S Identity %: 23.882017126546145
Amount23.882017126546145
Unit1
Property / Comparison to close relatives: Geothrix limicola / qualifier
 
POCPu: 0.09201748332183114
Amount0.09201748332183114
Unit1
Property / Comparison to close relatives: Geothrix limicola / qualifier
 
G+C Difference (%): 19.879999999999995
Amount19.879999999999995
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanospirillum stamsii / rank
 
Normal rank
Property / Comparison to close relatives: Methanospirillum stamsii / qualifier
 
16S Identity %: 23.69172216936251
Amount23.69172216936251
Unit1
Property / Comparison to close relatives: Methanospirillum stamsii / qualifier
 
POCPu: 0.8407286314806165
Amount0.8407286314806165
Unit1
Property / Comparison to close relatives: Methanospirillum stamsii / qualifier
 
G+C Difference (%): 3.9200000000000017
Amount3.9200000000000017
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Paludibaculum fermentans / rank
 
Normal rank
Property / Comparison to close relatives: Paludibaculum fermentans / qualifier
 
16S Identity %: 23.596574690770694
Amount23.596574690770694
Unit1
Property / Comparison to close relatives: Paludibaculum fermentans / qualifier
 
POCPu: 0.09581985866570847
Amount0.09581985866570847
Unit1
Property / Comparison to close relatives: Paludibaculum fermentans / qualifier
 
G+C Difference (%): 16.83
Amount16.83
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Geothrix oryzisoli / rank
 
Normal rank
Property / Comparison to close relatives: Geothrix oryzisoli / qualifier
 
16S Identity %: 23.40627973358706
Amount23.40627973358706
Unit1
Property / Comparison to close relatives: Geothrix oryzisoli / qualifier
 
POCPu: 0.11132758140829391
Amount0.11132758140829391
Unit1
Property / Comparison to close relatives: Geothrix oryzisoli / qualifier
 
G+C Difference (%): 21.930000000000007
Amount21.930000000000007
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Microcaldus variisymbioticus / rank
 
Normal rank
Property / Comparison to close relatives: Microcaldus variisymbioticus / qualifier
 
16S Identity %: 23.355576739752145
Amount23.355576739752145
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofollis fontis / rank
 
Normal rank
Property / Comparison to close relatives: Methanofollis fontis / qualifier
 
16S Identity %: 23.311132254995243
Amount23.311132254995243
Unit1
Property / Comparison to close relatives: Methanofollis fontis / qualifier
 
POCPu: 1.288830138797092
Amount1.288830138797092
Unit1
Property / Comparison to close relatives: Methanofollis fontis / qualifier
 
G+C Difference (%): 13.32
Amount13.32
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Geothrix fermentans / rank
 
Normal rank
Property / Comparison to close relatives: Geothrix fermentans / qualifier
 
16S Identity %: 23.215984776403424
Amount23.215984776403424
Unit1
Property / Comparison to close relatives: Geothrix fermentans / qualifier
 
POCPu: 0.16492578339747113
Amount0.16492578339747113
Unit1
Property / Comparison to close relatives: Geothrix fermentans / qualifier
 
G+C Difference (%): 22.629999999999995
Amount22.629999999999995
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Geothrix paludis / rank
 
Normal rank
Property / Comparison to close relatives: Geothrix paludis / qualifier
 
16S Identity %: 23.120837297811608
Amount23.120837297811608
Unit1
Property / Comparison to close relatives: Geothrix paludis / qualifier
 
POCPu: 0.1589825119236884
Amount0.1589825119236884
Unit1
Property / Comparison to close relatives: Geothrix paludis / qualifier
 
G+C Difference (%): 21.879999999999995
Amount21.879999999999995
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Geothrix terrae / rank
 
Normal rank
Property / Comparison to close relatives: Geothrix terrae / qualifier
 
16S Identity %: 23.025689819219792
Amount23.025689819219792
Unit1
Property / Comparison to close relatives: Geothrix terrae / qualifier
 
POCPu: 0.0794912559618442
Amount0.0794912559618442
Unit1
Property / Comparison to close relatives: Geothrix terrae / qualifier
 
G+C Difference (%): 21.86
Amount21.86
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Geothrix alkalitolerans / rank
 
Normal rank
Property / Comparison to close relatives: Geothrix alkalitolerans / qualifier
 
16S Identity %: 22.930542340627973
Amount22.930542340627973
Unit1
Property / Comparison to close relatives: Geothrix alkalitolerans / qualifier
 
POCPu: 0.13290802764486975
Amount0.13290802764486975
Unit1
Property / Comparison to close relatives: Geothrix alkalitolerans / qualifier
 
G+C Difference (%): 21.83
Amount21.83
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Geothrix fuzhouensis / rank
 
Normal rank
Property / Comparison to close relatives: Geothrix fuzhouensis / qualifier
 
16S Identity %: 22.74024738344434
Amount22.74024738344434
Unit1
Property / Comparison to close relatives: Geothrix fuzhouensis / qualifier
 
POCPu: 0
Amount0
Unit1
Property / Comparison to close relatives: Geothrix fuzhouensis / qualifier
 
G+C Difference (%): 19.64
Amount19.64
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 7
Amount7
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 5
Amount5
Unit1
Property / CAZyme
 
Property / CAZyme: GT21 / rank
 
Normal rank
Property / CAZyme: GT21 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 02:46, 13 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_021801785.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      26.26070409134158
      1.0408326661329064
      0 references
      26.070409134157945
      0.1366120218579235
      0 references
      25.309229305423408
      0.844187168355041
      1.0700000000000003
      0 references
      25.167464114832537
      0.17250301880282903
      11.730000000000004
      0 references
      25.023786869647957
      1.1987381703470033
      14.740000000000002
      0 references
      25.023786869647957
      0.14029180695847362
      21.980000000000004
      0 references
      24.928639391056137
      0.09220839096357768
      10.439999999999998
      0 references
      24.928639391056137
      0.09945300845350571
      13.060000000000002
      0 references
      24.928639391056137
      0.11425307055127107
      0 references
      0 references
      24.738344433872502
      1.2479474548440066
      14.920000000000002
      0 references
      24.45290199809705
      1.238938053097345
      0 references
      24.357754519505235
      2.212166918049271
      10.969999999999999
      0 references
      24.285714285714285
      1.1266747868453104
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      0 references
      0.772573635924674
      3.0899999999999963
      0 references
      23.882017126546145
      0.09201748332183114
      19.879999999999995
      0 references
      23.69172216936251
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      3.9200000000000017
      0 references
      23.596574690770694
      0.09581985866570847
      0 references
      23.40627973358706
      0.11132758140829391
      21.930000000000007
      0 references
      0 references
      23.311132254995243
      1.288830138797092
      0 references
      23.215984776403424
      0.16492578339747113
      22.629999999999995
      0 references
      23.120837297811608
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      21.879999999999995
      0 references
      23.025689819219792
      0.0794912559618442
      0 references
      22.930542340627973
      0.13290802764486975
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references