GCA_021799475.1 (Q104802): Difference between revisions
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Created a new Item |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (141 intermediate revisions by the same user not shown) | |||||||
| Property / Protologue of the species | |||||||
no current description - please contribute here | |||||||
| Property / Protologue of the species: no current description - please contribute here / rank | |||||||
Normal rank | |||||||
| Property / Instance of | |||||||
| Property / Instance of: Genome Assembly Accession / rank | |||||||
Normal rank | |||||||
| Property / GTDB | |||||||
| Property / GTDB: Archaea / rank | |||||||
Normal rank | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / GTDB: Archaea / qualifier | |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Conexivisphaera calida / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Conexivisphaera calida / qualifier | |||||||
16S Identity %: 28.61975642760487
| |||||||
| Property / Comparison to close relatives: Conexivisphaera calida / qualifier | |||||||
POCPu: 1.4158576051779936
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| Property / Comparison to close relatives: Conexivisphaera calida / qualifier | |||||||
G+C Difference (%): 15.490000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermoplasma volcanium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermoplasma volcanium / qualifier | |||||||
16S Identity %: 26.387936943111722
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| Property / Comparison to close relatives: Thermoplasma volcanium / qualifier | |||||||
POCPu: 2.4439102564102564
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| Property / Comparison to close relatives: Thermoplasma volcanium / qualifier | |||||||
G+C Difference (%): 6.659999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermofilum adornatum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermofilum adornatum / qualifier | |||||||
16S Identity %: 26.08695652173913
| |||||||
| Property / Comparison to close relatives: Thermofilum adornatum / qualifier | |||||||
POCPu: 1.058780576852866
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| Property / Comparison to close relatives: Thermofilum adornatum / qualifier | |||||||
G+C Difference (%): 0.07000000000000028
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Caldisphaera lagunensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier | |||||||
16S Identity %: 25.25879917184265
| |||||||
| Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier | |||||||
POCPu: 1.0071338648762065
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| Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier | |||||||
G+C Difference (%): 16.549999999999997
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis liminatans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis liminatans / qualifier | |||||||
16S Identity %: 25.155065472088218
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| Property / Comparison to close relatives: Methanofollis liminatans / qualifier | |||||||
POCPu: 1.0012135922330099
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| Property / Comparison to close relatives: Methanofollis liminatans / qualifier | |||||||
G+C Difference (%): 14.380000000000003
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Sulfurihydrogenibium yellowstonense / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Sulfurihydrogenibium yellowstonense / qualifier | |||||||
16S Identity %: 25
| |||||||
| Property / Comparison to close relatives: Sulfurihydrogenibium yellowstonense / qualifier | |||||||
POCPu: 0.13083296990841692
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| Property / Comparison to close relatives: Sulfurihydrogenibium yellowstonense / qualifier | |||||||
G+C Difference (%): 13.759999999999998
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis tationis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis tationis / qualifier | |||||||
16S Identity %: 24.663359319631468
| |||||||
| Property / Comparison to close relatives: Methanofollis tationis / qualifier | |||||||
POCPu: 1.1037527593818985
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| Property / Comparison to close relatives: Methanofollis tationis / qualifier | |||||||
G+C Difference (%): 14.560000000000002
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis ethanolicus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier | |||||||
16S Identity %: 24.64080459770115
| |||||||
| Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier | |||||||
POCPu: 1.1376564277588168
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| Property / Comparison to close relatives: Methanofollis ethanolicus / qualifier | |||||||
G+C Difference (%): 13.75
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis aquaemaris / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier | |||||||
16S Identity %: 24.16212003117693
| |||||||
| Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier | |||||||
POCPu: 1.2316715542521994
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| Property / Comparison to close relatives: Methanofollis aquaemaris / qualifier | |||||||
G+C Difference (%): 12.969999999999999
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermoplasma acidophilum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier | |||||||
16S Identity %: 23.972602739726025
| |||||||
| Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier | |||||||
POCPu: 2.1004942339373973
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| Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier | |||||||
G+C Difference (%): 0.5899999999999963
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Methanofollis fontis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Methanofollis fontis / qualifier | |||||||
16S Identity %: 23.204022988505745
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| Property / Comparison to close relatives: Methanofollis fontis / qualifier | |||||||
POCPu: 1.5228426395939088
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| Property / Comparison to close relatives: Methanofollis fontis / qualifier | |||||||
G+C Difference (%): 12.96
| |||||||
| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Microcaldus variisymbioticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Microcaldus variisymbioticus / qualifier | |||||||
16S Identity %: 22.893954410307234
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH19 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH19 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 2
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 7
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 6
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT21 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT21 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
| |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
| |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
| |||||||
| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 01:40, 13 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | GCA_021799475.1 |
genome assembly |
Statements
no current description - please contribute here
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