GCA_021796225.1 (Q104036): Difference between revisions
Appearance
Added qualifier: G+C Difference (%) (P22): 20.9 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronosalvus amylolyticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronosalvus amylolyticus / qualifier | |||||||
16S Identity %: 26.899383983572893
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| Property / Comparison to close relatives: Natronosalvus amylolyticus / qualifier | |||||||
POCPu: 0.4600585529067336
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| Property / Comparison to close relatives: Natronosalvus amylolyticus / qualifier | |||||||
G+C Difference (%): 14.170000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronosalvus vescus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronosalvus vescus / qualifier | |||||||
16S Identity %: 26.830937713894592
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| Property / Comparison to close relatives: Natronosalvus vescus / qualifier | |||||||
POCPu: 0.42629571460623733
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| Property / Comparison to close relatives: Natronosalvus vescus / qualifier | |||||||
G+C Difference (%): 16.479999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Saliphagus infecundisoli / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier | |||||||
16S Identity %: 26.744186046511626
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| Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier | |||||||
POCPu: 0.3345103140680171
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| Property / Comparison to close relatives: Saliphagus infecundisoli / qualifier | |||||||
G+C Difference (%): 18.880000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorussus vallis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorussus vallis / qualifier | |||||||
16S Identity %: 26.66209732693626
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| Property / Comparison to close relatives: Halorussus vallis / qualifier | |||||||
POCPu: 0.3245644004099761
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| Property / Comparison to close relatives: Halorussus vallis / qualifier | |||||||
G+C Difference (%): 20.85
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halogranum amylolyticum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halogranum amylolyticum / qualifier | |||||||
16S Identity %: 26.04523646333105
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| Property / Comparison to close relatives: Halogranum amylolyticum / qualifier | |||||||
POCPu: 0.4742436631234669
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| Property / Comparison to close relatives: Halogranum amylolyticum / qualifier | |||||||
G+C Difference (%): 17.54
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Caldisphaera lagunensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier | |||||||
16S Identity %: 25.79092159559835
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| Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier | |||||||
POCPu: 1.6723842195540308
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| Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier | |||||||
G+C Difference (%): 15.29
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halogranum rubrum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halogranum rubrum / qualifier | |||||||
16S Identity %: 25.753424657534246
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| Property / Comparison to close relatives: Halogranum rubrum / qualifier | |||||||
POCPu: 0.5395348837209302
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| Property / Comparison to close relatives: Halogranum rubrum / qualifier | |||||||
G+C Difference (%): 16.880000000000003
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natronobiforma cellulositropha / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier | |||||||
16S Identity %: 25.70621468926554
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| Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier | |||||||
POCPu: 0.31876138433515483
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| Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier | |||||||
G+C Difference (%): 20.229999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halogranum salarium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halogranum salarium / qualifier | |||||||
16S Identity %: 24.894810659186536
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Thermofilum adornatum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Thermofilum adornatum / qualifier | |||||||
16S Identity %: 24.830393487109905
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| Property / Comparison to close relatives: Thermofilum adornatum / qualifier | |||||||
POCPu: 1.1532738095238095
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| Property / Comparison to close relatives: Thermofilum adornatum / qualifier | |||||||
G+C Difference (%): 1.1899999999999977
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Microcaldus variisymbioticus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Microcaldus variisymbioticus / qualifier | |||||||
16S Identity %: 23.68681863230922
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloplanus natans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloplanus natans / qualifier | |||||||
16S Identity %: 22.549691569568196
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| Property / Comparison to close relatives: Haloplanus natans / qualifier | |||||||
POCPu: 0.2726510067114094
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| Property / Comparison to close relatives: Haloplanus natans / qualifier | |||||||
G+C Difference (%): 19.68
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| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH135 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH135 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH15 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH15 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 10
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| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 5
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| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM13 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Arginine degradation V / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Arginine degradation V / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 00:04, 13 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_021796225.1 |
genome assembly |
Statements
no current description - please contribute here
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