GCA_021785805.1 (Q102414): Difference between revisions
Appearance
Added qualifier: 16S Identity % (P3): 71.46892655367232 |
Created claim: MAGs (P28): no MAG matches found (Q42716) |
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| (131 intermediate revisions by the same user not shown) | |||||||
| Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier | |||||||
POCPu: 0.5748397081583021
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| Property / Comparison to close relatives: Natronobiforma cellulositropha / qualifier | |||||||
G+C Difference (%): 14.699999999999996
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Natrialba swarupiae / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Natrialba swarupiae / qualifier | |||||||
16S Identity %: 71.14461960246744
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| Property / Comparison to close relatives: Natrialba swarupiae / qualifier | |||||||
POCPu: 0.481251253258472
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| Property / Comparison to close relatives: Natrialba swarupiae / qualifier | |||||||
G+C Difference (%): 11.670000000000002
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halovivax cerinus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halovivax cerinus / qualifier | |||||||
16S Identity %: 70.8751793400287
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| Property / Comparison to close relatives: Halovivax cerinus / qualifier | |||||||
POCPu: 0.5171299288946347
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| Property / Comparison to close relatives: Halovivax cerinus / qualifier | |||||||
G+C Difference (%): 14.109999999999992
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halorussus vallis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halorussus vallis / qualifier | |||||||
16S Identity %: 70.54794520547945
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| Property / Comparison to close relatives: Halorussus vallis / qualifier | |||||||
POCPu: 0.4344193817878028
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| Property / Comparison to close relatives: Halorussus vallis / qualifier | |||||||
G+C Difference (%): 15.32
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloplanus natans / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloplanus natans / qualifier | |||||||
16S Identity %: 70.39067854694997
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| Property / Comparison to close relatives: Haloplanus natans / qualifier | |||||||
POCPu: 0.5307205552153501
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| Property / Comparison to close relatives: Haloplanus natans / qualifier | |||||||
G+C Difference (%): 14.149999999999999
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halogranum amylolyticum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halogranum amylolyticum / qualifier | |||||||
16S Identity %: 70.362765229295
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| Property / Comparison to close relatives: Halogranum amylolyticum / qualifier | |||||||
POCPu: 0.5123278898495036
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| Property / Comparison to close relatives: Halogranum amylolyticum / qualifier | |||||||
G+C Difference (%): 12.009999999999998
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloplanus salinus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloplanus salinus / qualifier | |||||||
16S Identity %: 70.35003431708992
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| Property / Comparison to close relatives: Haloplanus salinus / qualifier | |||||||
POCPu: 0.5924950625411455
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| Property / Comparison to close relatives: Haloplanus salinus / qualifier | |||||||
G+C Difference (%): 15.369999999999997
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halogranum rubrum / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halogranum rubrum / qualifier | |||||||
16S Identity %: 70.34246575342465
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| Property / Comparison to close relatives: Halogranum rubrum / qualifier | |||||||
POCPu: 0.5630221576462041
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| Property / Comparison to close relatives: Halogranum rubrum / qualifier | |||||||
G+C Difference (%): 11.350000000000001
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Caldisphaera lagunensis / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier | |||||||
16S Identity %: 70.21423635107118
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| Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier | |||||||
POCPu: 1.0962241169305724
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| Property / Comparison to close relatives: Caldisphaera lagunensis / qualifier | |||||||
G+C Difference (%): 20.82
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Haloplanus aerogenes / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Haloplanus aerogenes / qualifier | |||||||
16S Identity %: 69.89026063100137
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| Property / Comparison to close relatives: Haloplanus aerogenes / qualifier | |||||||
POCPu: 0.6372225884421007
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| Property / Comparison to close relatives: Haloplanus aerogenes / qualifier | |||||||
G+C Difference (%): 14.830000000000005
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Halogranum salarium / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Halogranum salarium / qualifier | |||||||
16S Identity %: 69.7967764540995
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| Property / Comparison to close relatives | |||||||
| Property / Comparison to close relatives: Atribacter laminatus / rank | |||||||
Normal rank | |||||||
| Property / Comparison to close relatives: Atribacter laminatus / qualifier | |||||||
16S Identity %: 64.5293315143247
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| Property / Comparison to close relatives: Atribacter laminatus / qualifier | |||||||
POCPu: 0.43254933765882675
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| Property / Comparison to close relatives: Atribacter laminatus / qualifier | |||||||
G+C Difference (%): 12.160000000000004
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| Property / CAZyme | |||||||
| Property / CAZyme: GH13 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH13 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GH0 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GH0 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT66 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT66 / qualifier | |||||||
Occurance: 2
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| Property / CAZyme | |||||||
| Property / CAZyme: GT22 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT22 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT2 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT2 / qualifier | |||||||
Occurance: 5
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| Property / CAZyme | |||||||
| Property / CAZyme: GT1 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT1 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: GT4 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT4 / qualifier | |||||||
Occurance: 4
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| Property / CAZyme | |||||||
| Property / CAZyme: GT51 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: GT51 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CE14 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CE14 / qualifier | |||||||
Occurance: 1
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| Property / CAZyme | |||||||
| Property / CAZyme: CBM50 / rank | |||||||
Normal rank | |||||||
| Property / CAZyme: CBM50 / qualifier | |||||||
Occurance: 1
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| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier | |||||||
| Property / Pathway | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank | |||||||
Normal rank | |||||||
| Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier | |||||||
| Property / Ecosystem | |||||||
| Property / Ecosystem: insect gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: insect gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: mouse gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: mouse gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human vaginal metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human vaginal metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: freshwater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: freshwater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: coral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: coral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: coral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: pig gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: pig gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: chicken gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: chicken gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: plant metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: plant metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: plant metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: soil metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: soil metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: soil metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human oral metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human oral metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: activated sludge metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: activated sludge metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: wastewater metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: wastewater metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: rhizosphere metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: rhizosphere metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: marine sediment metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: marine sediment metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human lung metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human lung metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: bovine gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: bovine gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human skin metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human skin metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / Ecosystem | |||||||
| Property / Ecosystem: human gut metagenome / rank | |||||||
Normal rank | |||||||
| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Prevalence (%): 0
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| Property / Ecosystem: human gut metagenome / qualifier | |||||||
Relative abundance (%): 0
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| Property / MAGs | |||||||
| Property / MAGs: no MAG matches found / rank | |||||||
Normal rank | |||||||
Latest revision as of 19:59, 12 August 2026
genome assembly
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
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| English | GCA_021785805.1 |
genome assembly |
Statements
no current description - please contribute here
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