Jump to content

GCA_013572355.1 (Q82984): Difference between revisions

From wikibase
Added qualifier: G+C Difference (%) (P22): 11.82
 
(307 intermediate revisions by the same user not shown)
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina soligelidi / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina soligelidi / qualifier
 
16S Identity %: 25.35421327367636
Amount25.35421327367636
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina lacustris / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina lacustris / qualifier
 
16S Identity %: 25.342960288808662
Amount25.342960288808662
Unit1
Property / Comparison to close relatives: Methanosarcina lacustris / qualifier
 
POCPu: 24.719535783365572
Amount24.719535783365572
Unit1
Property / Comparison to close relatives: Methanosarcina lacustris / qualifier
 
G+C Difference (%): 10.759999999999998
Amount10.759999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina spelaei / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina spelaei / qualifier
 
16S Identity %: 25.25925925925926
Amount25.25925925925926
Unit1
Property / Comparison to close relatives: Methanosarcina spelaei / qualifier
 
POCPu: 22.15211459754434
Amount22.15211459754434
Unit1
Property / Comparison to close relatives: Methanosarcina spelaei / qualifier
 
G+C Difference (%): 13.829999999999998
Amount13.829999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus taiwanensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus taiwanensis / qualifier
 
16S Identity %: 25.246132208157523
Amount25.246132208157523
Unit1
Property / Comparison to close relatives: Methanoculleus taiwanensis / qualifier
 
POCPu: 16.07592042076378
Amount16.07592042076378
Unit1
Property / Comparison to close relatives: Methanoculleus taiwanensis / qualifier
 
G+C Difference (%): 7.390000000000001
Amount7.390000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina thermophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina thermophila / qualifier
 
16S Identity %: 25.175315568022437
Amount25.175315568022437
Unit1
Property / Comparison to close relatives: Methanosarcina thermophila / qualifier
 
POCPu: 28.649138712601996
Amount28.649138712601996
Unit1
Property / Comparison to close relatives: Methanosarcina thermophila / qualifier
 
G+C Difference (%): 11.43
Amount11.43
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum zhilinae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
16S Identity %: 25.140056022408963
Amount25.140056022408963
Unit1
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
POCPu: 31.115879828326182
Amount31.115879828326182
Unit1
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
G+C Difference (%): 13.420000000000002
Amount13.420000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus thermophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
16S Identity %: 24.982841455044614
Amount24.982841455044614
Unit1
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
POCPu: 16.965865992414663
Amount16.965865992414663
Unit1
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
G+C Difference (%): 6.740000000000002
Amount6.740000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans uponensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans uponensis / qualifier
 
16S Identity %: 24.874191229331416
Amount24.874191229331416
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus portucalensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus portucalensis / qualifier
 
16S Identity %: 24.835526315789476
Amount24.835526315789476
Unit1
Property / Comparison to close relatives: Methanohalophilus portucalensis / qualifier
 
POCPu: 30.88235294117647
Amount30.88235294117647
Unit1
Property / Comparison to close relatives: Methanohalophilus portucalensis / qualifier
 
G+C Difference (%): 10.64
Amount10.64
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides orientis / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
16S Identity %: 24.728997289972902
Amount24.728997289972902
Unit1
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
POCPu: 31.330049261083744
Amount31.330049261083744
Unit1
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
G+C Difference (%): 9.899999999999999
Amount9.899999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina semesiae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina semesiae / qualifier
 
16S Identity %: 24.36338609772884
Amount24.36338609772884
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus halophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
16S Identity %: 24.33718558803535
Amount24.33718558803535
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
POCPu: 31.291789248462155
Amount31.291789248462155
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
G+C Difference (%): 10.18
Amount10.18
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus levihalophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
16S Identity %: 24.326292789512017
Amount24.326292789512017
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
POCPu: 30.65749235474006
Amount30.65749235474006
Unit1
Property / Comparison to close relatives: Methanohalophilus levihalophilus / qualifier
 
G+C Difference (%): 10.059999999999995
Amount10.059999999999995
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanofollis liminatans / rank
 
Normal rank
Property / Comparison to close relatives: Methanofollis liminatans / qualifier
 
16S Identity %: 24.315068493150687
Amount24.315068493150687
Unit1
Property / Comparison to close relatives: Methanofollis liminatans / qualifier
 
POCPu: 16.815655955544816
Amount16.815655955544816
Unit1
Property / Comparison to close relatives: Methanofollis liminatans / qualifier
 
G+C Difference (%): 8.380000000000003
Amount8.380000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina acetivorans / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina acetivorans / qualifier
 
16S Identity %: 24.2296918767507
Amount24.2296918767507
Unit1
Property / Comparison to close relatives: Methanosarcina acetivorans / qualifier
 
POCPu: 20.835231586940015
Amount20.835231586940015
Unit1
Property / Comparison to close relatives: Methanosarcina acetivorans / qualifier
 
G+C Difference (%): 9.899999999999999
Amount9.899999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus chelungpuianus / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
16S Identity %: 24.221716021260438
Amount24.221716021260438
Unit1
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
POCPu: 29.791765262659727
Amount29.791765262659727
Unit1
Property / Comparison to close relatives: Methanolobus chelungpuianus / qualifier
 
G+C Difference (%): 4.43
Amount4.43
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus halotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
16S Identity %: 24.20156139105749
Amount24.20156139105749
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
POCPu: 30.530765617660872
Amount30.530765617660872
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
G+C Difference (%): 9
Amount9
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolinea tarda / rank
 
Normal rank
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
16S Identity %: 24.14752957550452
Amount24.14752957550452
Unit1
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
POCPu: 14.835324978140484
Amount14.835324978140484
Unit1
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
G+C Difference (%): 2.25
Amount2.25
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans thermophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans thermophila / qualifier
 
16S Identity %: 24.140453547915143
Amount24.140453547915143
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans hollandica / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
16S Identity %: 24.088093599449415
Amount24.088093599449415
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
POCPu: 27.754725680036884
Amount27.754725680036884
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
G+C Difference (%): 10.71
Amount10.71
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus bombayensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
16S Identity %: 24.084124830393485
Amount24.084124830393485
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
POCPu: 28.624616732369688
Amount28.624616732369688
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
G+C Difference (%): 12.86
Amount12.86
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus profundi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
16S Identity %: 23.93465909090909
Amount23.93465909090909
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
POCPu: 28.019952288006937
Amount28.019952288006937
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
G+C Difference (%): 10.009999999999998
Amount10.009999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina baltica / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina baltica / qualifier
 
16S Identity %: 23.92127176381529
Amount23.92127176381529
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus psychrotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
16S Identity %: 23.917672107877927
Amount23.917672107877927
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
POCPu: 27.292156443684547
Amount27.292156443684547
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
G+C Difference (%): 11.25
Amount11.25
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosphaerula palustris / rank
 
Normal rank
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
16S Identity %: 23.858214042263125
Amount23.858214042263125
Unit1
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
POCPu: 13.638392857142856
Amount13.638392857142856
Unit1
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
G+C Difference (%): 2.770000000000003
Amount2.770000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides methylutens / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
16S Identity %: 23.741496598639454
Amount23.741496598639454
Unit1
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
POCPu: 30.74519230769231
Amount30.74519230769231
Unit1
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
G+C Difference (%): 10.079999999999998
Amount10.079999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus vulcani / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
16S Identity %: 23.628691983122362
Amount23.628691983122362
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
POCPu: 28.939122649955234
Amount28.939122649955234
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
G+C Difference (%): 12.379999999999995
Amount12.379999999999995
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix harundinacea / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
16S Identity %: 23.173431734317344
Amount23.173431734317344
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
POCPu: 26.291535289837498
Amount26.291535289837498
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
G+C Difference (%): 2.9200000000000017
Amount2.9200000000000017
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides alaskense / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
16S Identity %: 23.121808898614148
Amount23.121808898614148
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
POCPu: 30.093046033300684
Amount30.093046033300684
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
G+C Difference (%): 10.89
Amount10.89
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix thermoacetophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
16S Identity %: 22.847457627118644
Amount22.847457627118644
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
POCPu: 28.08316718883509
Amount28.08316718883509
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
G+C Difference (%): 0.9699999999999989
Amount0.9699999999999989
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus tindarius / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus tindarius / qualifier
 
16S Identity %: 22.807017543859647
Amount22.807017543859647
Unit1
Property / Comparison to close relatives: Methanolobus tindarius / qualifier
 
POCPu: 27.755102040816325
Amount27.755102040816325
Unit1
Property / Comparison to close relatives: Methanolobus tindarius / qualifier
 
G+C Difference (%): 12.79
Amount12.79
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix soehngenii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
16S Identity %: 22.606924643584524
Amount22.606924643584524
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
POCPu: 21.33080648557591
Amount21.33080648557591
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
G+C Difference (%): 1.5899999999999963
Amount1.5899999999999963
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methermicoccus shengliensis / rank
 
Normal rank
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
16S Identity %: 22.58543833580981
Amount22.58543833580981
Unit1
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
POCPu: 28.057988523104804
Amount28.057988523104804
Unit1
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
G+C Difference (%): 1.990000000000002
Amount1.990000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus mangrovi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
16S Identity %: 22.425474254742547
Amount22.425474254742547
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
POCPu: 30.46577946768061
Amount30.46577946768061
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
G+C Difference (%): 10.969999999999999
Amount10.969999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus zinderi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
16S Identity %: 22.388059701492537
Amount22.388059701492537
Unit1
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
POCPu: 29.105504587155963
Amount29.105504587155963
Unit1
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
G+C Difference (%): 8.519999999999996
Amount8.519999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus mahii / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
16S Identity %: 22.289972899728998
Amount22.289972899728998
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
POCPu: 31.492456896551722
Amount31.492456896551722
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
G+C Difference (%): 9.96
Amount9.96
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus taylorii / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus taylorii / qualifier
 
16S Identity %: 22.23786066150598
Amount22.23786066150598
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalobium evestigatum / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
16S Identity %: 22.22222222222222
Amount22.22222222222222
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
POCPu: 29.91473812423873
Amount29.91473812423873
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
G+C Difference (%): 16.159999999999997
Amount16.159999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum natronophilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
16S Identity %: 22.099447513812155
Amount22.099447513812155
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
POCPu: 29.011168618904932
Amount29.011168618904932
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
G+C Difference (%): 18.239999999999995
Amount18.239999999999995
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus oregonensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus oregonensis / qualifier
 
16S Identity %: 21.870604781997187
Amount21.870604781997187
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanimicrococcus blatticola / rank
 
Normal rank
Property / Comparison to close relatives: Methanimicrococcus blatticola / qualifier
 
16S Identity %: 21.793103448275865
Amount21.793103448275865
Unit1
Property / Comparison to close relatives: Methanimicrococcus blatticola / qualifier
 
POCPu: 22.198342032545288
Amount22.198342032545288
Unit1
Property / Comparison to close relatives: Methanimicrococcus blatticola / qualifier
 
G+C Difference (%): 10.600000000000001
Amount10.600000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus sediminis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
16S Identity %: 21.27371273712737
Amount21.27371273712737
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
POCPu: 29.157175398633257
Amount29.157175398633257
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
G+C Difference (%): 11.64
Amount11.64
Unit1
Property / CAZyme
 
Property / CAZyme: GH6 / rank
 
Normal rank
Property / CAZyme: GH6 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH35 / rank
 
Normal rank
Property / CAZyme: GH35 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH105 / rank
 
Normal rank
Property / CAZyme: GH105 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: GH33 / rank
 
Normal rank
Property / CAZyme: GH33 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT1 / rank
 
Normal rank
Property / CAZyme: GT1 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 8
Amount8
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 11
Amount11
Unit1
Property / CAZyme
 
Property / CAZyme: CE9 / rank
 
Normal rank
Property / CAZyme: CE9 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM5 / rank
 
Normal rank
Property / CAZyme: CBM5 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: CBM13 / rank
 
Normal rank
Property / CAZyme: CBM13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / Pathway
 
Property / Pathway: Glycolysis, core module involving three-carbon compounds / rank
 
Normal rank
Property / Pathway: Glycolysis, core module involving three-carbon compounds / qualifier
 
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / rank
 
Normal rank
Property / Pathway: Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine / qualifier
 
Property / Pathway
 
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / rank
 
Normal rank
Property / Pathway: Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: V/A-type ATPase, prokaryotes / rank
 
Normal rank
Property / Pathway: V/A-type ATPase, prokaryotes / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Acetyl-CoA pathway, CO2 => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / rank
 
Normal rank
Property / Pathway: Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate / qualifier
 
Property / Pathway
 
Property / Pathway: Isoleucine biosynthesis, pyruvate => 2-oxobutanoate / rank
 
Normal rank
Property / Pathway: Isoleucine biosynthesis, pyruvate => 2-oxobutanoate / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / rank
 
Normal rank
Property / Pathway: UDP-Glc biosynthesis, Glc => UDP-Glc / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Heme biosynthesis, archaea, siroheme => heme / rank
 
Normal rank
Property / Pathway: Heme biosynthesis, archaea, siroheme => heme / qualifier
 
Property / Pathway
 
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / rank
 
Normal rank
Property / Pathway: Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P / qualifier
 
Property / Pathway
 
Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / rank
 
Normal rank
Property / Pathway: UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / rank
 
Normal rank
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank
 
Normal rank
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis, CO2 => methane / rank
 
Normal rank
Property / Pathway: Methanogenesis, CO2 => methane / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Alanine degradation II / rank
 
Normal rank
Property / Pathway: Alanine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Glutamine degradation II / rank
 
Normal rank
Property / Pathway: Glutamine degradation II / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis from carbon dioxide / rank
 
Normal rank
Property / Pathway: Methanogenesis from carbon dioxide / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0.4
Amount0.4
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.19
Amount0.19
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 2.3
Amount2.3
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0.66
Amount0.66
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 10:39, 9 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_013572355.1
    genome assembly

      Statements

      no current description - please contribute here
      0 references
      0 references
      25.837988826815643
      22.12230215827338
      11.269999999999996
      0 references
      25.81560283687943
      27.485638532920902
      11.269999999999996
      0 references
      25.661914460285136
      22.639919082939986
      0 references
      25.63739376770538
      23.567684800289175
      0 references
      25.63718140929535
      24.71952842745769
      11.159999999999997
      0 references
      25.576662143826322
      24.27809453742873
      12.869999999999997
      0 references
      25.49152542372881
      28.683966635773867
      0 references
      0 references
      25.342960288808662
      24.719535783365572
      10.759999999999998
      0 references
      25.25925925925926
      22.15211459754434
      13.829999999999998
      0 references
      25.246132208157523
      16.07592042076378
      7.390000000000001
      0 references
      25.175315568022437
      28.649138712601996
      0 references
      25.140056022408963
      31.115879828326182
      13.420000000000002
      0 references
      24.982841455044614
      16.965865992414663
      6.740000000000002
      0 references
      0 references
      24.835526315789476
      30.88235294117647
      0 references
      24.728997289972902
      31.330049261083744
      9.899999999999999
      0 references
      0 references
      24.33718558803535
      31.291789248462155
      0 references
      24.326292789512017
      30.65749235474006
      10.059999999999995
      0 references
      24.315068493150687
      16.815655955544816
      8.380000000000003
      0 references
      24.2296918767507
      20.835231586940015
      9.899999999999999
      0 references
      24.221716021260438
      29.791765262659727
      0 references
      24.20156139105749
      30.530765617660872
      0 references
      24.14752957550452
      14.835324978140484
      0 references
      0 references
      24.088093599449415
      27.754725680036884
      0 references
      24.084124830393485
      28.624616732369688
      0 references
      23.93465909090909
      28.019952288006937
      10.009999999999998
      0 references
      0 references
      23.917672107877927
      27.292156443684547
      0 references
      23.858214042263125
      13.638392857142856
      2.770000000000003
      0 references
      23.741496598639454
      30.74519230769231
      10.079999999999998
      0 references
      23.628691983122362
      28.939122649955234
      12.379999999999995
      0 references
      23.173431734317344
      26.291535289837498
      2.9200000000000017
      0 references
      23.121808898614148
      30.093046033300684
      0 references
      22.847457627118644
      28.08316718883509
      0.9699999999999989
      0 references
      22.807017543859647
      27.755102040816325
      0 references
      22.606924643584524
      21.33080648557591
      1.5899999999999963
      0 references
      22.58543833580981
      28.057988523104804
      1.990000000000002
      0 references
      22.425474254742547
      30.46577946768061
      10.969999999999999
      0 references
      22.388059701492537
      29.105504587155963
      8.519999999999996
      0 references
      22.289972899728998
      31.492456896551722
      0 references
      0 references
      22.22222222222222
      29.91473812423873
      16.159999999999997
      0 references
      22.099447513812155
      29.011168618904932
      18.239999999999995
      0 references
      0 references
      21.793103448275865
      22.198342032545288
      10.600000000000001
      0 references
      21.27371273712737
      29.157175398633257
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references
      0 references