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GCA_013329355.1 (Q82181): Difference between revisions

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Added qualifier: POCPu (P4): 2.136317395727365
 
(269 intermediate revisions by the same user not shown)
Property / Comparison to close relatives: Methanococcoides burtonii / qualifier
 
G+C Difference (%): 3.4100000000000037
Amount3.4100000000000037
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus halotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
16S Identity %: 77.6218611521418
Amount77.6218611521418
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
POCPu: 2.1683014971605576
Amount2.1683014971605576
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
G+C Difference (%): 0.5900000000000034
Amount0.5900000000000034
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix soehngenii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
16S Identity %: 77.6075857038658
Amount77.6075857038658
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
POCPu: 1.7640320733104238
Amount1.7640320733104238
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
G+C Difference (%): 6.82
Amount6.82
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina semesiae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina semesiae / qualifier
 
16S Identity %: 77.59643916913946
Amount77.59643916913946
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus mangrovi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
16S Identity %: 77.58369723435226
Amount77.58369723435226
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
POCPu: 2.2489539748953975
Amount2.2489539748953975
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
G+C Difference (%): 2.5600000000000023
Amount2.5600000000000023
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium alcaliphilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
16S Identity %: 77.5811209439528
Amount77.5811209439528
Unit1
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
POCPu: 1.4364640883977902
Amount1.4364640883977902
Unit1
Property / Comparison to close relatives: Methanobacterium alcaliphilum / qualifier
 
G+C Difference (%): 10.770000000000003
Amount10.770000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocella paludicola / rank
 
Normal rank
Property / Comparison to close relatives: Methanocella paludicola / qualifier
 
16S Identity %: 77.542062911485
Amount77.542062911485
Unit1
Property / Comparison to close relatives: Methanocella paludicola / qualifier
 
POCPu: 1.4645308924485128
Amount1.4645308924485128
Unit1
Property / Comparison to close relatives: Methanocella paludicola / qualifier
 
G+C Difference (%): 10.75
Amount10.75
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus sediminis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
16S Identity %: 77.51091703056768
Amount77.51091703056768
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
POCPu: 2.196704942586121
Amount2.196704942586121
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
G+C Difference (%): 3.230000000000004
Amount3.230000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
16S Identity %: 77.49453750910416
Amount77.49453750910416
Unit1
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
POCPu: 1.8791105543376134
Amount1.8791105543376134
Unit1
Property / Comparison to close relatives: Methanothermobacter thermautotrophicus / qualifier
 
G+C Difference (%): 5.369999999999997
Amount5.369999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter defluvii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter defluvii / qualifier
 
16S Identity %: 77.47615553925165
Amount77.47615553925165
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides orientis / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
16S Identity %: 77.43813682678311
Amount77.43813682678311
Unit1
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
POCPu: 2.50272034820457
Amount2.50272034820457
Unit1
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
G+C Difference (%): 1.490000000000002
Amount1.490000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocella arvoryzae / rank
 
Normal rank
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
16S Identity %: 77.38876732312181
Amount77.38876732312181
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
POCPu: 1.5110509697789807
Amount1.5110509697789807
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
G+C Difference (%): 10.43
Amount10.43
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermobacter thermophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermobacter thermophilus / qualifier
 
16S Identity %: 77.3542600896861
Amount77.3542600896861
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides alaskense / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
16S Identity %: 77.33433734939759
Amount77.33433734939759
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
POCPu: 2.324324324324324
Amount2.324324324324324
Unit1
Property / Comparison to close relatives: Methanococcoides alaskense / qualifier
 
G+C Difference (%): 2.480000000000004
Amount2.480000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans hollandica / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
16S Identity %: 77.31653076352853
Amount77.31653076352853
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
POCPu: 2.073849266565503
Amount2.073849266565503
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
G+C Difference (%): 2.3000000000000043
Amount2.3000000000000043
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides methylutens / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
16S Identity %: 77.2992700729927
Amount77.2992700729927
Unit1
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
POCPu: 2.4364406779661016
Amount2.4364406779661016
Unit1
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
G+C Difference (%): 1.6700000000000017
Amount1.6700000000000017
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus bombayensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
16S Identity %: 77.2826880934989
Amount77.2826880934989
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
POCPu: 2.223816355810617
Amount2.223816355810617
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
G+C Difference (%): 4.450000000000003
Amount4.450000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanobacterium arcticum / rank
 
Normal rank
Property / Comparison to close relatives: Methanobacterium arcticum / qualifier
 
16S Identity %: 77.27603787327021
Amount77.27603787327021
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans thermophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans thermophila / qualifier
 
16S Identity %: 77.26218097447796
Amount77.26218097447796
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina subterranea / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina subterranea / qualifier
 
16S Identity %: 77.25947521865889
Amount77.25947521865889
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methermicoccus shengliensis / rank
 
Normal rank
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
16S Identity %: 77.2590361445783
Amount77.2590361445783
Unit1
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
POCPu: 2.562350529552443
Amount2.562350529552443
Unit1
Property / Comparison to close relatives: Methermicoccus shengliensis / qualifier
 
G+C Difference (%): 10.399999999999999
Amount10.399999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans uponensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans uponensis / qualifier
 
16S Identity %: 77.23935389133626
Amount77.23935389133626
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus psychrotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
16S Identity %: 77.17872968980798
Amount77.17872968980798
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
POCPu: 2.0488940628637953
Amount2.0488940628637953
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
G+C Difference (%): 2.8400000000000034
Amount2.8400000000000034
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermogymnomonas acidicola / rank
 
Normal rank
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
16S Identity %: 77.17231222385863
Amount77.17231222385863
Unit1
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
POCPu: 2.681908111672895
Amount2.681908111672895
Unit1
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
G+C Difference (%): 12.259999999999998
Amount12.259999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermoplasma acidophilum / rank
 
Normal rank
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
16S Identity %: 77.16994894237783
Amount77.16994894237783
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
POCPu: 2.009005888465535
Amount2.009005888465535
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
G+C Difference (%): 1.8200000000000003
Amount1.8200000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina acetivorans / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina acetivorans / qualifier
 
16S Identity %: 77.14701601164484
Amount77.14701601164484
Unit1
Property / Comparison to close relatives: Methanosarcina acetivorans / qualifier
 
POCPu: 1.4675052410901468
Amount1.4675052410901468
Unit1
Property / Comparison to close relatives: Methanosarcina acetivorans / qualifier
 
G+C Difference (%): 1.490000000000002
Amount1.490000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum natronophilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
16S Identity %: 77.14701601164484
Amount77.14701601164484
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
POCPu: 2.251292972315181
Amount2.251292972315181
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
G+C Difference (%): 9.829999999999998
Amount9.829999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Cuniculiplasma divulgatum / rank
 
Normal rank
Property / Comparison to close relatives: Cuniculiplasma divulgatum / qualifier
 
16S Identity %: 77.13037144938092
Amount77.13037144938092
Unit1
Property / Comparison to close relatives: Cuniculiplasma divulgatum / qualifier
 
POCPu: 2.0445529447665547
Amount2.0445529447665547
Unit1
Property / Comparison to close relatives: Cuniculiplasma divulgatum / qualifier
 
G+C Difference (%): 6.8700000000000045
Amount6.8700000000000045
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina horonobensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina horonobensis / qualifier
 
16S Identity %: 77.09700948212983
Amount77.09700948212983
Unit1
Property / Comparison to close relatives: Methanosarcina horonobensis / qualifier
 
POCPu: 1.6224703419399862
Amount1.6224703419399862
Unit1
Property / Comparison to close relatives: Methanosarcina horonobensis / qualifier
 
G+C Difference (%): 2.8599999999999994
Amount2.8599999999999994
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum zhilinae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
16S Identity %: 77.09700948212983
Amount77.09700948212983
Unit1
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
POCPu: 2.3923444976076556
Amount2.3923444976076556
Unit1
Property / Comparison to close relatives: Methanosalsum zhilinae / qualifier
 
G+C Difference (%): 5.010000000000005
Amount5.010000000000005
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina siciliae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
16S Identity %: 77.08029197080292
Amount77.08029197080292
Unit1
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
POCPu: 1.5320836337418888
Amount1.5320836337418888
Unit1
Property / Comparison to close relatives: Methanosarcina siciliae / qualifier
 
G+C Difference (%): 1.230000000000004
Amount1.230000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus profundi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
16S Identity %: 77.07100591715977
Amount77.07100591715977
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
POCPu: 1.9635675419919567
Amount1.9635675419919567
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
G+C Difference (%): 1.6000000000000014
Amount1.6000000000000014
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina vacuolata / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
16S Identity %: 77.00729927007299
Amount77.00729927007299
Unit1
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
POCPu: 1.701959232139323
Amount1.701959232139323
Unit1
Property / Comparison to close relatives: Methanosarcina vacuolata / qualifier
 
G+C Difference (%): 4.460000000000001
Amount4.460000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus oregonensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus oregonensis / qualifier
 
16S Identity %: 77.00145560407569
Amount77.00145560407569
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus taylorii / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus taylorii / qualifier
 
16S Identity %: 77.00145560407569
Amount77.00145560407569
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus mahii / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
16S Identity %: 76.92867540029113
Amount76.92867540029113
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
POCPu: 2.34375
Amount2.34375
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
G+C Difference (%): 1.5500000000000043
Amount1.5500000000000043
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolinea tarda / rank
 
Normal rank
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
16S Identity %: 76.90058479532163
Amount76.90058479532163
Unit1
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
POCPu: 1.7722349852313752
Amount1.7722349852313752
Unit1
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
G+C Difference (%): 10.659999999999997
Amount10.659999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina mazei / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina mazei / qualifier
 
16S Identity %: 76.89364957918899
Amount76.89364957918899
Unit1
Property / Comparison to close relatives: Methanosarcina mazei / qualifier
 
POCPu: 1.723076923076923
Amount1.723076923076923
Unit1
Property / Comparison to close relatives: Methanosarcina mazei / qualifier
 
G+C Difference (%): 2.75
Amount2.75
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina soligelidi / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina soligelidi / qualifier
 
16S Identity %: 76.85325264750378
Amount76.85325264750378
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina spelaei / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina spelaei / qualifier
 
16S Identity %: 76.73716012084593
Amount76.73716012084593
Unit1
Property / Comparison to close relatives: Methanosarcina spelaei / qualifier
 
POCPu: 1.4233576642335766
Amount1.4233576642335766
Unit1
Property / Comparison to close relatives: Methanosarcina spelaei / qualifier
 
G+C Difference (%): 5.420000000000002
Amount5.420000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermoplasma volcanium / rank
 
Normal rank
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
16S Identity %: 76.67638483965014
Amount76.67638483965014
Unit1
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
POCPu: 2.030456852791878
Amount2.030456852791878
Unit1
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
G+C Difference (%): 4.25
Amount4.25
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina flavescens / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina flavescens / qualifier
 
16S Identity %: 76.60516605166052
Amount76.60516605166052
Unit1
Property / Comparison to close relatives: Methanosarcina flavescens / qualifier
 
POCPu: 2.221149203283438
Amount2.221149203283438
Unit1
Property / Comparison to close relatives: Methanosarcina flavescens / qualifier
 
G+C Difference (%): 2.8599999999999994
Amount2.8599999999999994
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina thermophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina thermophila / qualifier
 
16S Identity %: 76.34643377001456
Amount76.34643377001456
Unit1
Property / Comparison to close relatives: Methanosarcina thermophila / qualifier
 
POCPu: 2.1847070506454815
Amount2.1847070506454815
Unit1
Property / Comparison to close relatives: Methanosarcina thermophila / qualifier
 
G+C Difference (%): 3.020000000000003
Amount3.020000000000003
Unit1
Property / Carbon source
 
Property / Carbon source: starch / rank
 
Normal rank
Property / CAZyme
 
Property / CAZyme: GH57 / rank
 
Normal rank
Property / CAZyme: GH57 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH101 / rank
 
Normal rank
Property / CAZyme: GH101 / qualifier
 
Occurance: 3
Amount3
Unit1
Property / CAZyme
 
Property / CAZyme: GH77 / rank
 
Normal rank
Property / CAZyme: GH77 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH0 / rank
 
Normal rank
Property / CAZyme: GH0 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GH1 / rank
 
Normal rank
Property / CAZyme: GH1 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 10
Amount10
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 10
Amount10
Unit1
Property / CAZyme
 
Property / CAZyme: GT0 / rank
 
Normal rank
Property / CAZyme: GT0 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT35 / rank
 
Normal rank
Property / CAZyme: GT35 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE4 / rank
 
Normal rank
Property / CAZyme: CE4 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CE1 / rank
 
Normal rank
Property / CAZyme: CE1 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: CBM48 / rank
 
Normal rank
Property / CAZyme: CBM48 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: Triacylglycerol biosynthesis / rank
 
Normal rank
Property / Pathway: Triacylglycerol biosynthesis / qualifier
 
Property / Pathway
 
Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / rank
 
Normal rank
Property / Pathway: Lycopene biosynthesis, geranylgeranyl-PP => lycopene / qualifier
 
Property / Pathway
 
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / rank
 
Normal rank
Property / Pathway: NAD biosynthesis, aspartate => quinolinate => NAD / qualifier
 
Property / Pathway
 
Property / Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin / rank
 
Normal rank
Property / Pathway: Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin / qualifier
 
Property / Pathway
 
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / rank
 
Normal rank
Property / Pathway: Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor / qualifier
 
Property / Pathway
 
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / rank
 
Normal rank
Property / Pathway: De novo purine biosynthesis, PRPP + glutamine => IMP / qualifier
 
Property / Pathway
 
Property / Pathway: Proline degradation / rank
 
Normal rank
Property / Pathway: Proline degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier
 
Property / Pathway
 
Property / Pathway: Acetyl-CoA to crotonyl-CoA / rank
 
Normal rank
Property / Pathway: Acetyl-CoA to crotonyl-CoA / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0.5
Amount0.5
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 17.1
Amount17.1
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0.2
Amount0.2
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 21.1
Amount21.1
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0.89
Amount0.89
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0.8
Amount0.8
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0.16
Amount0.16
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0.3
Amount0.3
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0.9
Amount0.9
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 2.9
Amount2.9
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 2.04
Amount2.04
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / MAGs
 
Property / MAGs: no MAG matches found / rank
 
Normal rank

Latest revision as of 02:10, 9 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_013329355.1
    genome assembly

      Statements

      no current description - please contribute here
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