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GCA_006954405.1 (Q72400): Difference between revisions

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Added qualifier: 16S Identity % (P3): 90.92344119968429
Added qualifier: Ecosystem (P27): Pig (Q65928)
 
(328 intermediate revisions by the same user not shown)
Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier
 
POCPu: 47.05495228693649
Amount47.05495228693649
Unit1
Property / Comparison to close relatives: Methanomethylophilus alvi / qualifier
 
G+C Difference (%): 7.950000000000003
Amount7.950000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier
 
16S Identity %: 88.74912648497553
Amount88.74912648497553
Unit1
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier
 
POCPu: 22.675
Amount22.675
Unit1
Property / Comparison to close relatives: Methanomassiliicoccus luminyensis / qualifier
 
G+C Difference (%): 12.839999999999996
Amount12.839999999999996
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Cuniculiplasma divulgatum / rank
 
Normal rank
Property / Comparison to close relatives: Cuniculiplasma divulgatum / qualifier
 
16S Identity %: 78.44474761255115
Amount78.44474761255115
Unit1
Property / Comparison to close relatives: Cuniculiplasma divulgatum / qualifier
 
POCPu: 4.490038655961938
Amount4.490038655961938
Unit1
Property / Comparison to close relatives: Cuniculiplasma divulgatum / qualifier
 
G+C Difference (%): 10.340000000000003
Amount10.340000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermogymnomonas acidicola / rank
 
Normal rank
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
16S Identity %: 78.28947368421053
Amount78.28947368421053
Unit1
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
POCPu: 5.7820927723840345
Amount5.7820927723840345
Unit1
Property / Comparison to close relatives: Thermogymnomonas acidicola / qualifier
 
G+C Difference (%): 8.79
Amount8.79
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Acidiplasma aeolicum / rank
 
Normal rank
Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier
 
16S Identity %: 78.2089552238806
Amount78.2089552238806
Unit1
Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier
 
POCPu: 4.729309271935283
Amount4.729309271935283
Unit1
Property / Comparison to close relatives: Acidiplasma aeolicum / qualifier
 
G+C Difference (%): 13.660000000000004
Amount13.660000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Picrophilus torridus / rank
 
Normal rank
Property / Comparison to close relatives: Picrophilus torridus / qualifier
 
16S Identity %: 78.17433081674675
Amount78.17433081674675
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermoplasma volcanium / rank
 
Normal rank
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
16S Identity %: 78.06539509536785
Amount78.06539509536785
Unit1
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
POCPu: 5.557382439986847
Amount5.557382439986847
Unit1
Property / Comparison to close relatives: Thermoplasma volcanium / qualifier
 
G+C Difference (%): 7.719999999999999
Amount7.719999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Picrophilus oshimae / rank
 
Normal rank
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
16S Identity %: 77.98227675528288
Amount77.98227675528288
Unit1
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
POCPu: 5.185680829708933
Amount5.185680829708933
Unit1
Property / Comparison to close relatives: Picrophilus oshimae / qualifier
 
G+C Difference (%): 11.660000000000004
Amount11.660000000000004
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Thermoplasma acidophilum / rank
 
Normal rank
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
16S Identity %: 77.98227675528288
Amount77.98227675528288
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
POCPu: 5.785401950891355
Amount5.785401950891355
Unit1
Property / Comparison to close relatives: Thermoplasma acidophilum / qualifier
 
G+C Difference (%): 1.6499999999999986
Amount1.6499999999999986
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Acidiplasma cupricumulans / rank
 
Normal rank
Property / Comparison to close relatives: Acidiplasma cupricumulans / qualifier
 
16S Identity %: 77.86259541984732
Amount77.86259541984732
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix harundinacea / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
16S Identity %: 77.82738095238095
Amount77.82738095238095
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
POCPu: 6.2745098039215685
Amount6.2745098039215685
Unit1
Property / Comparison to close relatives: Methanothrix harundinacea / qualifier
 
G+C Difference (%): 7.859999999999999
Amount7.859999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus sediminis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
16S Identity %: 77.79291553133515
Amount77.79291553133515
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
POCPu: 6.47605083088954
Amount6.47605083088954
Unit1
Property / Comparison to close relatives: Methanolobus sediminis / qualifier
 
G+C Difference (%): 6.700000000000003
Amount6.700000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus mangrovi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
16S Identity %: 77.79291553133515
Amount77.79291553133515
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
POCPu: 6.521739130434782
Amount6.521739130434782
Unit1
Property / Comparison to close relatives: Methanolobus mangrovi / qualifier
 
G+C Difference (%): 6.030000000000001
Amount6.030000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus zinderi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
16S Identity %: 77.76261937244202
Amount77.76261937244202
Unit1
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
POCPu: 6.20384047267356
Amount6.20384047267356
Unit1
Property / Comparison to close relatives: Methanolobus zinderi / qualifier
 
G+C Difference (%): 3.5799999999999983
Amount3.5799999999999983
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides orientis / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
16S Identity %: 77.58855585831063
Amount77.58855585831063
Unit1
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
POCPu: 6.59223817118554
Amount6.59223817118554
Unit1
Property / Comparison to close relatives: Methanococcoides orientis / qualifier
 
G+C Difference (%): 4.960000000000001
Amount4.960000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus bombayensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
16S Identity %: 77.52732240437157
Amount77.52732240437157
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
POCPu: 6.115276476101219
Amount6.115276476101219
Unit1
Property / Comparison to close relatives: Methanolobus bombayensis / qualifier
 
G+C Difference (%): 7.920000000000002
Amount7.920000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides burtonii / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides burtonii / qualifier
 
16S Identity %: 77.50511247443764
Amount77.50511247443764
Unit1
Property / Comparison to close relatives: Methanococcoides burtonii / qualifier
 
POCPu: 6.172224987555998
Amount6.172224987555998
Unit1
Property / Comparison to close relatives: Methanococcoides burtonii / qualifier
 
G+C Difference (%): 6.880000000000003
Amount6.880000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanocella arvoryzae / rank
 
Normal rank
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
16S Identity %: 77.50511247443764
Amount77.50511247443764
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
POCPu: 5.995575221238938
Amount5.995575221238938
Unit1
Property / Comparison to close relatives: Methanocella arvoryzae / qualifier
 
G+C Difference (%): 6.960000000000001
Amount6.960000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcoides methylutens / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
16S Identity %: 77.46575342465754
Amount77.46575342465754
Unit1
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
POCPu: 6.29207664422579
Amount6.29207664422579
Unit1
Property / Comparison to close relatives: Methanococcoides methylutens / qualifier
 
G+C Difference (%): 5.140000000000001
Amount5.140000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus psychrotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
16S Identity %: 77.19799857040744
Amount77.19799857040744
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
POCPu: 5.7749372289431635
Amount5.7749372289431635
Unit1
Property / Comparison to close relatives: Methanolobus psychrotolerans / qualifier
 
G+C Difference (%): 6.310000000000002
Amount6.310000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus halotolerans / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
16S Identity %: 77.1265189421015
Amount77.1265189421015
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
POCPu: 6.262626262626263
Amount6.262626262626263
Unit1
Property / Comparison to close relatives: Methanolobus halotolerans / qualifier
 
G+C Difference (%): 4.060000000000002
Amount4.060000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus profundi / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
16S Identity %: 77.1101573676681
Amount77.1101573676681
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
POCPu: 5.796429399489914
Amount5.796429399489914
Unit1
Property / Comparison to close relatives: Methanolobus profundi / qualifier
 
G+C Difference (%): 5.07
Amount5.07
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosalsum natronophilum / rank
 
Normal rank
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
16S Identity %: 77.08333333333334
Amount77.08333333333334
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
POCPu: 6.7892084198043285
Amount6.7892084198043285
Unit1
Property / Comparison to close relatives: Methanosalsum natronophilum / qualifier
 
G+C Difference (%): 13.299999999999997
Amount13.299999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanomethylovorans hollandica / rank
 
Normal rank
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
16S Identity %: 77.06167706167706
Amount77.06167706167706
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
POCPu: 6.311881188118812
Amount6.311881188118812
Unit1
Property / Comparison to close relatives: Methanomethylovorans hollandica / qualifier
 
G+C Difference (%): 5.770000000000003
Amount5.770000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalobium evestigatum / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
16S Identity %: 77.00754975978037
Amount77.00754975978037
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
POCPu: 6.094037299711059
Amount6.094037299711059
Unit1
Property / Comparison to close relatives: Methanohalobium evestigatum / qualifier
 
G+C Difference (%): 11.219999999999999
Amount11.219999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus halophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
16S Identity %: 77.00205338809035
Amount77.00205338809035
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
POCPu: 6.6259808195292065
Amount6.6259808195292065
Unit1
Property / Comparison to close relatives: Methanohalophilus halophilus / qualifier
 
G+C Difference (%): 5.240000000000002
Amount5.240000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolinea tarda / rank
 
Normal rank
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
16S Identity %: 76.92307692307693
Amount76.92307692307693
Unit1
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
POCPu: 4.819661666134696
Amount4.819661666134696
Unit1
Property / Comparison to close relatives: Methanolinea tarda / qualifier
 
G+C Difference (%): 7.189999999999998
Amount7.189999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanotorris formicicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
16S Identity %: 76.91256830601093
Amount76.91256830601093
Unit1
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
POCPu: 6.898602438299138
Amount6.898602438299138
Unit1
Property / Comparison to close relatives: Methanotorris formicicus / qualifier
 
G+C Difference (%): 15.200000000000003
Amount15.200000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanohalophilus mahii / rank
 
Normal rank
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
16S Identity %: 76.90735694822888
Amount76.90735694822888
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
POCPu: 6.649091974223785
Amount6.649091974223785
Unit1
Property / Comparison to close relatives: Methanohalophilus mahii / qualifier
 
G+C Difference (%): 5.020000000000003
Amount5.020000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Ferroplasma acidiphilum / rank
 
Normal rank
Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier
 
16S Identity %: 76.80555555555556
Amount76.80555555555556
Unit1
Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier
 
POCPu: 4.826732673267327
Amount4.826732673267327
Unit1
Property / Comparison to close relatives: Ferroplasma acidiphilum / qualifier
 
G+C Difference (%): 11.149999999999999
Amount11.149999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoregula boonei / rank
 
Normal rank
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
16S Identity %: 76.78447678447678
Amount76.78447678447678
Unit1
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
POCPu: 5.8763673365555835
Amount5.8763673365555835
Unit1
Property / Comparison to close relatives: Methanoregula boonei / qualifier
 
G+C Difference (%): 6.869999999999997
Amount6.869999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix thermoacetophila / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
16S Identity %: 76.75528289025222
Amount76.75528289025222
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
POCPu: 7.749766573295985
Amount7.749766573295985
Unit1
Property / Comparison to close relatives: Methanothrix thermoacetophila / qualifier
 
G+C Difference (%): 5.909999999999997
Amount5.909999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus oregonensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus oregonensis / qualifier
 
16S Identity %: 76.73267326732673
Amount76.73267326732673
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosarcina semesiae / rank
 
Normal rank
Property / Comparison to close relatives: Methanosarcina semesiae / qualifier
 
16S Identity %: 76.57657657657657
Amount76.57657657657657
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanotorris igneus / rank
 
Normal rank
Property / Comparison to close relatives: Methanotorris igneus / qualifier
 
16S Identity %: 76.51877133105802
Amount76.51877133105802
Unit1
Property / Comparison to close relatives: Methanotorris igneus / qualifier
 
POCPu: 7.224806201550388
Amount7.224806201550388
Unit1
Property / Comparison to close relatives: Methanotorris igneus / qualifier
 
G+C Difference (%): 15.340000000000003
Amount15.340000000000003
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanosphaerula palustris / rank
 
Normal rank
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
16S Identity %: 76.49074708704592
Amount76.49074708704592
Unit1
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
POCPu: 5.380200860832137
Amount5.380200860832137
Unit1
Property / Comparison to close relatives: Methanosphaerula palustris / qualifier
 
G+C Difference (%): 7.710000000000001
Amount7.710000000000001
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus marisnigri / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
16S Identity %: 76.47058823529412
Amount76.47058823529412
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
POCPu: 6.024716786817714
Amount6.024716786817714
Unit1
Property / Comparison to close relatives: Methanoculleus marisnigri / qualifier
 
G+C Difference (%): 14.420000000000002
Amount14.420000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothrix soehngenii / rank
 
Normal rank
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
16S Identity %: 76.46657571623466
Amount76.46657571623466
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
POCPu: 4.942709503482363
Amount4.942709503482363
Unit1
Property / Comparison to close relatives: Methanothrix soehngenii / qualifier
 
G+C Difference (%): 3.3500000000000014
Amount3.3500000000000014
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolacinia petrolearia / rank
 
Normal rank
Property / Comparison to close relatives: Methanolacinia petrolearia / qualifier
 
16S Identity %: 76.36612021857924
Amount76.36612021857924
Unit1
Property / Comparison to close relatives: Methanolacinia petrolearia / qualifier
 
POCPu: 5.705492424242424
Amount5.705492424242424
Unit1
Property / Comparison to close relatives: Methanolacinia petrolearia / qualifier
 
G+C Difference (%): 0.240000000000002
Amount0.240000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
16S Identity %: 76.3573883161512
Amount76.3573883161512
Unit1
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
POCPu: 6.6364519261897055
Amount6.6364519261897055
Unit1
Property / Comparison to close relatives: Methanothermococcus thermolithotrophicus / qualifier
 
G+C Difference (%): 14.75
Amount14.75
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus palmolei / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus palmolei / qualifier
 
16S Identity %: 76.26050420168067
Amount76.26050420168067
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus thermophilus / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
16S Identity %: 76.24309392265194
Amount76.24309392265194
Unit1
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
POCPu: 6.972928630024611
Amount6.972928630024611
Unit1
Property / Comparison to close relatives: Methanoculleus thermophilus / qualifier
 
G+C Difference (%): 11.68
Amount11.68
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanogenium cariaci / rank
 
Normal rank
Property / Comparison to close relatives: Methanogenium cariaci / qualifier
 
16S Identity %: 76.18393960192176
Amount76.18393960192176
Unit1
Property / Comparison to close relatives: Methanogenium cariaci / qualifier
 
POCPu: 4.8117897727272725
Amount4.8117897727272725
Unit1
Property / Comparison to close relatives: Methanogenium cariaci / qualifier
 
G+C Difference (%): 4.420000000000002
Amount4.420000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanogenium frigidum / rank
 
Normal rank
Property / Comparison to close relatives: Methanogenium frigidum / qualifier
 
16S Identity %: 76.18393960192176
Amount76.18393960192176
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanoculleus chikugoensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanoculleus chikugoensis / qualifier
 
16S Identity %: 76.17379117028732
Amount76.17379117028732
Unit1
Property / Comparison to close relatives: Methanoculleus chikugoensis / qualifier
 
POCPu: 5.9147869674185465
Amount5.9147869674185465
Unit1
Property / Comparison to close relatives: Methanoculleus chikugoensis / qualifier
 
G+C Difference (%): 14.219999999999999
Amount14.219999999999999
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Halomarina oriensis / rank
 
Normal rank
Property / Comparison to close relatives: Halomarina oriensis / qualifier
 
16S Identity %: 76.0082023239918
Amount76.0082023239918
Unit1
Property / Comparison to close relatives: Halomarina oriensis / qualifier
 
POCPu: 2.080761770410862
Amount2.080761770410862
Unit1
Property / Comparison to close relatives: Halomarina oriensis / qualifier
 
G+C Difference (%): 19.159999999999997
Amount19.159999999999997
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanolobus vulcani / rank
 
Normal rank
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
16S Identity %: 75.8840169731259
Amount75.8840169731259
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
POCPu: 6.18705035971223
Amount6.18705035971223
Unit1
Property / Comparison to close relatives: Methanolobus vulcani / qualifier
 
G+C Difference (%): 7.439999999999998
Amount7.439999999999998
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanothermococcus okinawensis / rank
 
Normal rank
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
16S Identity %: 75.80095432856169
Amount75.80095432856169
Unit1
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
POCPu: 6.844850065189048
Amount6.844850065189048
Unit1
Property / Comparison to close relatives: Methanothermococcus okinawensis / qualifier
 
G+C Difference (%): 18.36
Amount18.36
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcus vannielii / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcus vannielii / qualifier
 
16S Identity %: 75.20491803278688
Amount75.20491803278688
Unit1
Property / Comparison to close relatives: Methanococcus vannielii / qualifier
 
POCPu: 6.478247062559543
Amount6.478247062559543
Unit1
Property / Comparison to close relatives: Methanococcus vannielii / qualifier
 
G+C Difference (%): 16.310000000000002
Amount16.310000000000002
Unit1
Property / Comparison to close relatives
 
Property / Comparison to close relatives: Methanococcus aeolicus / rank
 
Normal rank
Property / Comparison to close relatives: Methanococcus aeolicus / qualifier
 
16S Identity %: 75.17053206002728
Amount75.17053206002728
Unit1
Property / Comparison to close relatives: Methanococcus aeolicus / qualifier
 
POCPu: 6.352459016393443
Amount6.352459016393443
Unit1
Property / Comparison to close relatives: Methanococcus aeolicus / qualifier
 
G+C Difference (%): 17.6
Amount17.6
Unit1
Property / CAZyme
 
Property / CAZyme: GH28 / rank
 
Normal rank
Property / CAZyme: GH28 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH13 / rank
 
Normal rank
Property / CAZyme: GH13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH105 / rank
 
Normal rank
Property / CAZyme: GH105 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GH19 / rank
 
Normal rank
Property / CAZyme: GH19 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / CAZyme
 
Property / CAZyme: GT66 / rank
 
Normal rank
Property / CAZyme: GT66 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT7 / rank
 
Normal rank
Property / CAZyme: GT7 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT13 / rank
 
Normal rank
Property / CAZyme: GT13 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: GT4 / rank
 
Normal rank
Property / CAZyme: GT4 / qualifier
 
Occurance: 7
Amount7
Unit1
Property / CAZyme
 
Property / CAZyme: GT2 / rank
 
Normal rank
Property / CAZyme: GT2 / qualifier
 
Occurance: 5
Amount5
Unit1
Property / CAZyme
 
Property / CAZyme: GT20 / rank
 
Normal rank
Property / CAZyme: GT20 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM50 / rank
 
Normal rank
Property / CAZyme: CBM50 / qualifier
 
Occurance: 4
Amount4
Unit1
Property / CAZyme
 
Property / CAZyme: CBM48 / rank
 
Normal rank
Property / CAZyme: CBM48 / qualifier
 
Occurance: 1
Amount1
Unit1
Property / CAZyme
 
Property / CAZyme: CBM5 / rank
 
Normal rank
Property / CAZyme: CBM5 / qualifier
 
Occurance: 2
Amount2
Unit1
Property / Pathway
 
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / rank
 
Normal rank
Property / Pathway: PRPP biosynthesis, ribose 5P => PRPP / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / rank
 
Normal rank
Property / Pathway: Citrate cycle (TCA cycle, Krebs cycle) / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / rank
 
Normal rank
Property / Pathway: Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate / qualifier
 
Property / Pathway
 
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / rank
 
Normal rank
Property / Pathway: Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate / qualifier
 
Property / Pathway
 
Property / Pathway: Proline biosynthesis, glutamate => proline / rank
 
Normal rank
Property / Pathway: Proline biosynthesis, glutamate => proline / qualifier
 
Property / Pathway
 
Property / Pathway: Cysteine biosynthesis, serine => cysteine / rank
 
Normal rank
Property / Pathway: Cysteine biosynthesis, serine => cysteine / qualifier
 
Property / Pathway
 
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / rank
 
Normal rank
Property / Pathway: Ornithine biosynthesis, glutamate => ornithine / qualifier
 
Property / Pathway
 
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / rank
 
Normal rank
Property / Pathway: Adenine ribonucleotide biosynthesis, IMP => ADP, ATP / qualifier
 
Property / Pathway
 
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / rank
 
Normal rank
Property / Pathway: Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP, CDP/CTP / qualifier
 
Property / Pathway
 
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / rank
 
Normal rank
Property / Pathway: Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP / qualifier
 
Property / Pathway
 
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / rank
 
Normal rank
Property / Pathway: Coenzyme A biosynthesis, pantothenate => CoA / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / rank
 
Normal rank
Property / Pathway: Pyruvate oxidation, pyruvate => acetyl-CoA / qualifier
 
Property / Pathway
 
Property / Pathway: C10-C20 isoprenoid biosynthesis, bacteria / rank
 
Normal rank
Property / Pathway: C10-C20 isoprenoid biosynthesis, bacteria / qualifier
 
Property / Pathway
 
Property / Pathway: C10-C20 isoprenoid biosynthesis, archaea / rank
 
Normal rank
Property / Pathway: C10-C20 isoprenoid biosynthesis, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway, archaea, fructose 6P => ribose 5P / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine biosynthesis, ornithine => arginine / rank
 
Normal rank
Property / Pathway: Arginine biosynthesis, ornithine => arginine / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine salvage pathway, HMP/HET => TMP / rank
 
Normal rank
Property / Pathway: Thiamine salvage pathway, HMP/HET => TMP / qualifier
 
Property / Pathway
 
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / rank
 
Normal rank
Property / Pathway: GDP-Man biosynthesis, Fru-6P => GDP-Man / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / rank
 
Normal rank
Property / Pathway: Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate / qualifier
 
Property / Pathway
 
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / rank
 
Normal rank
Property / Pathway: Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP / qualifier
 
Property / Pathway
 
Property / Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea / rank
 
Normal rank
Property / Pathway: C5 isoprenoid biosynthesis, mevalonate pathway, archaea / qualifier
 
Property / Pathway
 
Property / Pathway: Mannose degradation / rank
 
Normal rank
Property / Pathway: Mannose degradation / qualifier
 
Property / Pathway
 
Property / Pathway: Aspartate degradation I / rank
 
Normal rank
Property / Pathway: Aspartate degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Arginine degradation I / rank
 
Normal rank
Property / Pathway: Arginine degradation I / qualifier
 
Property / Pathway
 
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / rank
 
Normal rank
Property / Pathway: Pentose phosphate pathway (non-oxidative branch) / qualifier
 
Property / Pathway
 
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / rank
 
Normal rank
Property / Pathway: Pyruvate:ferredoxin oxidoreductase / qualifier
 
Property / Pathway
 
Property / Pathway: Methanogenesis - methyl-coM / rank
 
Normal rank
Property / Pathway: Methanogenesis - methyl-coM / qualifier
 
Property / Ecosystem
 
Property / Ecosystem: insect gut metagenome / rank
 
Normal rank
Property / Ecosystem: insect gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: insect gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: mouse gut metagenome / rank
 
Normal rank
Property / Ecosystem: mouse gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: mouse gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human vaginal metagenome / rank
 
Normal rank
Property / Ecosystem: human vaginal metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human vaginal metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: freshwater metagenome / rank
 
Normal rank
Property / Ecosystem: freshwater metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: freshwater metagenome / qualifier
 
Relative abundance (%): 0.02
Amount0.02
Unit1
Property / Ecosystem
 
Property / Ecosystem: coral metagenome / rank
 
Normal rank
Property / Ecosystem: coral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: coral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: pig gut metagenome / rank
 
Normal rank
Property / Ecosystem: pig gut metagenome / qualifier
 
Prevalence (%): 10
Amount10
Unit1
Property / Ecosystem: pig gut metagenome / qualifier
 
Relative abundance (%): 0.04
Amount0.04
Unit1
Property / Ecosystem
 
Property / Ecosystem: chicken gut metagenome / rank
 
Normal rank
Property / Ecosystem: chicken gut metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: chicken gut metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine metagenome / rank
 
Normal rank
Property / Ecosystem: marine metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: plant metagenome / rank
 
Normal rank
Property / Ecosystem: plant metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: plant metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: soil metagenome / rank
 
Normal rank
Property / Ecosystem: soil metagenome / qualifier
 
Prevalence (%): 0.1
Amount0.1
Unit1
Property / Ecosystem: soil metagenome / qualifier
 
Relative abundance (%): 0.01
Amount0.01
Unit1
Property / Ecosystem
 
Property / Ecosystem: human oral metagenome / rank
 
Normal rank
Property / Ecosystem: human oral metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human oral metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: activated sludge metagenome / rank
 
Normal rank
Property / Ecosystem: activated sludge metagenome / qualifier
 
Prevalence (%): 0.8
Amount0.8
Unit1
Property / Ecosystem: activated sludge metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: wastewater metagenome / rank
 
Normal rank
Property / Ecosystem: wastewater metagenome / qualifier
 
Prevalence (%): 1
Amount1
Unit1
Property / Ecosystem: wastewater metagenome / qualifier
 
Relative abundance (%): 0.03
Amount0.03
Unit1
Property / Ecosystem
 
Property / Ecosystem: rhizosphere metagenome / rank
 
Normal rank
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: rhizosphere metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: marine sediment metagenome / rank
 
Normal rank
Property / Ecosystem: marine sediment metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: marine sediment metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human lung metagenome / rank
 
Normal rank
Property / Ecosystem: human lung metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human lung metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: bovine gut metagenome / rank
 
Normal rank
Property / Ecosystem: bovine gut metagenome / qualifier
 
Prevalence (%): 6
Amount6
Unit1
Property / Ecosystem: bovine gut metagenome / qualifier
 
Relative abundance (%): 0.31
Amount0.31
Unit1
Property / Ecosystem
 
Property / Ecosystem: human skin metagenome / rank
 
Normal rank
Property / Ecosystem: human skin metagenome / qualifier
 
Prevalence (%): 0
Amount0
Unit1
Property / Ecosystem: human skin metagenome / qualifier
 
Relative abundance (%): 0
Amount0
Unit1
Property / Ecosystem
 
Property / Ecosystem: human gut metagenome / rank
 
Normal rank
Property / Ecosystem: human gut metagenome / qualifier
 
Prevalence (%): 0.2
Amount0.2
Unit1
Property / Ecosystem: human gut metagenome / qualifier
 
Relative abundance (%): 0.31
Amount0.31
Unit1
Property / MAGs
 
Property / MAGs: CosteaPI_2017__mickey2-11-30-0__bin_66.fa / rank
 
Normal rank
Property / MAGs: CosteaPI_2017__mickey2-11-30-0__bin_66.fa / qualifier
 
Property / MAGs
 
Property / MAGs: PIGvsB100pB20.1913.fa / rank
 
Normal rank
Property / MAGs: PIGvsB100pB20.1913.fa / qualifier
 

Latest revision as of 08:21, 6 August 2026

genome assembly
Language Label Description Also known as
default for all languages
No label defined
    English
    GCA_006954405.1
    genome assembly

      Statements

      no current description - please contribute here
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